RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 USP21Q9UK80 565 aa12.41□□□□□ -0.42
SNCA-211ENST00000508895 PHRF1Q9P1Y6 1649 aaKnown RBP12.4□□□□□ -0.42
SNCA-211ENST00000508895 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
SNCA-211ENST00000508895 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.42
SNCA-211ENST00000508895 GLI3P10071 1580 aa12.4□□□□□ -0.42
SNCA-211ENST00000508895 PPIP5K1Q6PFW1 1433 aa12.4□□□□□ -0.42
SNCA-211ENST00000508895 FAM83GA6ND36 823 aa12.4□□□□□ -0.42
SNCA-211ENST00000508895 EIF3AQ14152 1382 aaKnown RBP12.4□□□□□ -0.42
SNCA-211ENST00000508895 BRWD3Q6RI45 1802 aa12.39□□□□□ -0.43
SNCA-211ENST00000508895 SRPK2P78362 688 aaKnown RBP12.39□□□□□ -0.43
SNCA-211ENST00000508895 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
SNCA-211ENST00000508895 AKAP12Q02952 1782 aa12.38□□□□□ -0.43
SNCA-211ENST00000508895 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
SNCA-211ENST00000508895 CARD11Q9BXL7 1154 aa12.38□□□□□ -0.43
SNCA-211ENST00000508895 CABP1Q9NZU7 370 aa12.38□□□□□ -0.43
SNCA-211ENST00000508895 ARHGEF10O15013 1369 aa12.38□□□□□ -0.43
SNCA-211ENST00000508895 RBM6P78332 1123 aaKnown RBP12.37□□□□□ -0.43
SNCA-211ENST00000508895 CDK12Q9NYV4 1490 aaPredicted RBP12.37□□□□□ -0.43
SNCA-211ENST00000508895 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
SNCA-211ENST00000508895 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
SNCA-211ENST00000508895 PIK3C2AO00443 1686 aa12.36□□□□□ -0.43
SNCA-211ENST00000508895 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
SNCA-211ENST00000508895 CD163L1Q9NR16 1453 aa12.35□□□□□ -0.43
SNCA-211ENST00000508895 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
SNCA-211ENST00000508895 TESK2Q96S53 571 aa12.35□□□□□ -0.43
SNCA-211ENST00000508895 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
SNCA-211ENST00000508895 COL14A1Q05707 1796 aaKnown RBP12.34□□□□□ -0.43
SNCA-211ENST00000508895 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
SNCA-211ENST00000508895 USP6P35125 1406 aa12.34□□□□□ -0.43
SNCA-211ENST00000508895 EVC2Q86UK5 1308 aa12.34□□□□□ -0.43
SNCA-211ENST00000508895 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
SNCA-211ENST00000508895 GJD4Q96KN9 370 aaPredicted RBP12.33□□□□□ -0.44
SNCA-211ENST00000508895 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
SNCA-211ENST00000508895 USP19O94966 1318 aa12.33□□□□□ -0.44
SNCA-211ENST00000508895 KIAA0232Q92628 1395 aa12.32□□□□□ -0.44
SNCA-211ENST00000508895 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
SNCA-211ENST00000508895 CPSF1Q10570 1443 aaKnown RBP12.32□□□□□ -0.44
SNCA-211ENST00000508895 ST20-MTHFSA0A0A6YYL1 179 aa12.32□□□□□ -0.44
SNCA-211ENST00000508895 ZC3H6P61129 1189 aaKnown RBP12.32□□□□□ -0.44
SNCA-211ENST00000508895 LMO7Q8WWI1 1683 aa12.32□□□□□ -0.44
SNCA-211ENST00000508895 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
SNCA-211ENST00000508895 RGPD5Q99666 1765 aa12.31□□□□□ -0.44
SNCA-211ENST00000508895 BTG4Q9NY30 223 aa12.31□□□□□ -0.44
SNCA-211ENST00000508895 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
SNCA-211ENST00000508895 CAMTA1Q9Y6Y1 1673 aa12.31□□□□□ -0.44
SNCA-211ENST00000508895 COL18A1P39060 1754 aa12.3□□□□□ -0.44
SNCA-211ENST00000508895 VPS72Q15906 364 aa12.3□□□□□ -0.44
SNCA-211ENST00000508895 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
SNCA-211ENST00000508895 SLC12A5Q9H2X9 1139 aa12.3□□□□□ -0.44
SNCA-211ENST00000508895 MYOM1P52179 1685 aa12.29□□□□□ -0.44
SNCA-211ENST00000508895 SLIT3O75094 1523 aa12.29□□□□□ -0.44
SNCA-211ENST00000508895 TTC21BQ7Z4L5 1316 aa12.29□□□□□ -0.44
SNCA-211ENST00000508895 EP400Q96L91 3159 aa12.28□□□□□ -0.44
SNCA-211ENST00000508895 GCP02774 474 aa12.28□□□□□ -0.44
SNCA-211ENST00000508895 PRDM11Q9NQV5 511 aa12.28□□□□□ -0.44
SNCA-211ENST00000508895 USP47Q96K76 1375 aa12.27□□□□□ -0.45
SNCA-211ENST00000508895 NLRP6P59044 892 aa12.26□□□□□ -0.45
SNCA-211ENST00000508895 SEPT12Q8IYM1 358 aa12.26□□□□□ -0.45
SNCA-211ENST00000508895 SPATA31A5Q5VU36 1347 aa12.26□□□□□ -0.45
SNCA-211ENST00000508895 SPATA31A7Q8IWB4 1347 aa12.26□□□□□ -0.45
SNCA-211ENST00000508895 ATAD2Q6PL18 1390 aa12.26□□□□□ -0.45
SNCA-211ENST00000508895 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
SNCA-211ENST00000508895 ONECUT3O60422 494 aaPredicted RBP12.25□□□□□ -0.45
SNCA-211ENST00000508895 FAM98CQ17RN3 349 aaKnown RBP12.25□□□□□ -0.45
SNCA-211ENST00000508895 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
SNCA-211ENST00000508895 NME9Q86XW9 330 aa12.25□□□□□ -0.45
SNCA-211ENST00000508895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.25□□□□□ -0.45
SNCA-211ENST00000508895 AXIN2Q9Y2T1 843 aa12.25□□□□□ -0.45
SNCA-211ENST00000508895 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
SNCA-211ENST00000508895 A0A1W2PP64 1363 aa12.25□□□□□ -0.45
SNCA-211ENST00000508895 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
SNCA-211ENST00000508895 NFAT5O94916 1531 aa12.25□□□□□ -0.45
SNCA-211ENST00000508895 SOX12O15370 315 aa12.24□□□□□ -0.45
SNCA-211ENST00000508895 CPDO75976 1380 aa12.24□□□□□ -0.45
SNCA-211ENST00000508895 LARP1Q6PKG0 1096 aaKnown RBP12.24□□□□□ -0.45
SNCA-211ENST00000508895 USP54Q70EL1 1684 aa12.24□□□□□ -0.45
SNCA-211ENST00000508895 NLRP13Q86W25 1043 aa12.24□□□□□ -0.45
SNCA-211ENST00000508895 TMC1Q8TDI8 760 aa12.24□□□□□ -0.45
SNCA-211ENST00000508895 STRN4Q9NRL3 753 aa12.24□□□□□ -0.45
SNCA-211ENST00000508895 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
SNCA-211ENST00000508895 ZBTB7CA1YPR0 619 aa12.23□□□□□ -0.45
SNCA-211ENST00000508895 BRD4O60885 1362 aaPredicted RBP12.22□□□□□ -0.45
SNCA-211ENST00000508895 FBLN1P23142 703 aa12.22□□□□□ -0.45
SNCA-211ENST00000508895 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
SNCA-211ENST00000508895 COL5A2P05997 1499 aaPredicted RBP12.21□□□□□ -0.45
SNCA-211ENST00000508895 LTN1O94822 1766 aa12.2□□□□□ -0.46
SNCA-211ENST00000508895 TTC21AQ8NDW8 1320 aa12.2□□□□□ -0.46
SNCA-211ENST00000508895 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
SNCA-211ENST00000508895 USP35Q9P2H5 1018 aa12.2□□□□□ -0.46
SNCA-211ENST00000508895 USP31Q70CQ4 1352 aa12.19□□□□□ -0.46
SNCA-211ENST00000508895 PUS7Q96PZ0 661 aaKnown RBP12.19□□□□□ -0.46
SNCA-211ENST00000508895 OVOS2A0A0J9YW53 1432 aa12.19□□□□□ -0.46
SNCA-211ENST00000508895 OVOS2Q6IE36 1432 aa12.19□□□□□ -0.46
SNCA-211ENST00000508895 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
SNCA-211ENST00000508895 KIF20BQ96Q89 1820 aa12.18□□□□□ -0.46
SNCA-211ENST00000508895 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
SNCA-211ENST00000508895 KRT27Q7Z3Y8 459 aa12.18□□□□□ -0.46
SNCA-211ENST00000508895 DEFB132Q7Z7B7 95 aa12.18□□□□□ -0.46
SNCA-211ENST00000508895 CARD14Q9BXL6 1004 aa12.18□□□□□ -0.46
SNCA-211ENST00000508895 EDC4Q6P2E9 1401 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms