RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 FNBP4Q8N3X1 1017 aaPredicted RBP11.73□□□□□ -0.53
GYPB-210ENST00000508841 ZC3H4Q9UPT8 1303 aaKnown RBP11.73□□□□□ -0.53
GYPB-210ENST00000508841 ABL2P42684 1182 aa11.72□□□□□ -0.53
GYPB-210ENST00000508841 WASHC4Q2M389 1173 aa11.72□□□□□ -0.53
GYPB-210ENST00000508841 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
GYPB-210ENST00000508841 EVA1BQ9NVM1 165 aa11.72□□□□□ -0.53
GYPB-210ENST00000508841 NR6A1Q15406 480 aa11.71□□□□□ -0.53
GYPB-210ENST00000508841 PRDM9Q9NQV7 894 aa11.71□□□□□ -0.53
GYPB-210ENST00000508841 CTHP32929 405 aa11.7□□□□□ -0.54
GYPB-210ENST00000508841 GGCXP38435 758 aa11.7□□□□□ -0.54
GYPB-210ENST00000508841 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
GYPB-210ENST00000508841 SUPT5HO00267 1087 aaKnown RBP11.69□□□□□ -0.54
GYPB-210ENST00000508841 KCNH2Q12809 1159 aa11.69□□□□□ -0.54
GYPB-210ENST00000508841 GPKOWQ92917 476 aaPredicted RBP eCLIP11.69□□□□□ -0.54
GYPB-210ENST00000508841 ZNF330Q9Y3S2 320 aaPredicted RBP11.69□□□□□ -0.54
GYPB-210ENST00000508841 FKBPLQ9UIM3 349 aa11.68□□□□□ -0.54
GYPB-210ENST00000508841 S1PR4O95977 384 aa11.66□□□□□ -0.54
GYPB-210ENST00000508841 EPS8L1Q8TE68 723 aa11.66□□□□□ -0.54
GYPB-210ENST00000508841 MAP10Q9P2G4 905 aa11.66□□□□□ -0.54
GYPB-210ENST00000508841 NBPF14Q5TI25 921 aa11.65□□□□□ -0.54
GYPB-210ENST00000508841 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
GYPB-210ENST00000508841 IRF5Q13568 498 aa11.63□□□□□ -0.55
GYPB-210ENST00000508841 GPSM3Q9Y4H4 160 aa11.63□□□□□ -0.55
GYPB-210ENST00000508841 GPR37L1O60883 481 aa11.62□□□□□ -0.55
GYPB-210ENST00000508841 SOX11P35716 441 aa11.62□□□□□ -0.55
GYPB-210ENST00000508841 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
GYPB-210ENST00000508841 FCF1Q9Y324 198 aaKnown RBP11.62□□□□□ -0.55
GYPB-210ENST00000508841 UNC93B1Q9H1C4 597 aa11.61□□□□□ -0.55
GYPB-210ENST00000508841 PDXDC2PQ6P474 469 aa11.6□□□□□ -0.55
GYPB-210ENST00000508841 ANKLE1Q8NAG6 615 aa11.6□□□□□ -0.55
GYPB-210ENST00000508841 ZBBXA8MT70 800 aa11.59□□□□□ -0.55
GYPB-210ENST00000508841 PTK2Q05397 1052 aa11.59□□□□□ -0.55
GYPB-210ENST00000508841 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
GYPB-210ENST00000508841 NR1H3Q13133 447 aa11.58□□□□□ -0.56
GYPB-210ENST00000508841 PKDCCQ504Y2 493 aa11.58□□□□□ -0.56
GYPB-210ENST00000508841 TRIM67Q6ZTA4 783 aa11.58□□□□□ -0.56
GYPB-210ENST00000508841 ZBTB24O43167 697 aaPredicted RBP11.57□□□□□ -0.56
GYPB-210ENST00000508841 EIF4G2P78344 907 aaKnown RBP eCLIP11.57□□□□□ -0.56
GYPB-210ENST00000508841 ARID3CA6NKF2 412 aa11.56□□□□□ -0.56
GYPB-210ENST00000508841 SERPINA10Q9UK55 444 aa11.56□□□□□ -0.56
GYPB-210ENST00000508841 RNF223E7ERA6 249 aa11.55□□□□□ -0.56
GYPB-210ENST00000508841 SLC19A1P41440 591 aa11.55□□□□□ -0.56
GYPB-210ENST00000508841 MCCD1P59942 119 aaPredicted RBP11.55□□□□□ -0.56
GYPB-210ENST00000508841 MYT1Q01538 1121 aa11.55□□□□□ -0.56
GYPB-210ENST00000508841 VAC14Q08AM6 782 aa11.55□□□□□ -0.56
GYPB-210ENST00000508841 CCDC97Q96F63 343 aaPredicted RBP11.55□□□□□ -0.56
GYPB-210ENST00000508841 PTCRAQ6ISU1 281 aaPredicted RBP11.54□□□□□ -0.56
GYPB-210ENST00000508841 CALR3Q96L12 384 aaKnown RBP11.54□□□□□ -0.56
GYPB-210ENST00000508841 DGAT1O75907 488 aa11.53□□□□□ -0.56
GYPB-210ENST00000508841 GLMNQ92990 594 aa11.53□□□□□ -0.56
GYPB-210ENST00000508841 C1orf115Q9H7X2 142 aa11.53□□□□□ -0.56
GYPB-210ENST00000508841 POM121CA8CG34 1229 aa11.52□□□□□ -0.57
GYPB-210ENST00000508841 FBXO45P0C2W1 286 aa11.52□□□□□ -0.57
GYPB-210ENST00000508841 RPIAP49247 311 aa11.52□□□□□ -0.57
GYPB-210ENST00000508841 SEMA3FQ13275 785 aa11.52□□□□□ -0.57
GYPB-210ENST00000508841 ARHGAP9Q9BRR9 750 aa11.52□□□□□ -0.57
GYPB-210ENST00000508841 POTECB2RU33 542 aa11.51□□□□□ -0.57
GYPB-210ENST00000508841 BPHLQ86WA6 291 aaPredicted RBP11.51□□□□□ -0.57
GYPB-210ENST00000508841 PPEF1O14829 653 aaPredicted RBP11.5□□□□□ -0.57
GYPB-210ENST00000508841 SH3BP5LQ7L8J4 393 aa11.5□□□□□ -0.57
GYPB-210ENST00000508841 ZNF511Q8NB15 262 aa11.5□□□□□ -0.57
GYPB-210ENST00000508841 HDGFL1Q5TGJ6 251 aa11.49□□□□□ -0.57
GYPB-210ENST00000508841 SPRYD7Q5W111 196 aa11.49□□□□□ -0.57
GYPB-210ENST00000508841 ZBTB33Q86T24 672 aa11.49□□□□□ -0.57
GYPB-210ENST00000508841 CCDC82Q8N4S0 544 aa11.49□□□□□ -0.57
GYPB-210ENST00000508841 BAP1Q92560 729 aa11.49□□□□□ -0.57
GYPB-210ENST00000508841 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
GYPB-210ENST00000508841 ALG2Q9H553 416 aa11.49□□□□□ -0.57
GYPB-210ENST00000508841 WNT7BP56706 349 aa11.48□□□□□ -0.57
GYPB-210ENST00000508841 PRR20EP86478 221 aa11.48□□□□□ -0.57
GYPB-210ENST00000508841 PRR20CP86479 221 aa11.48□□□□□ -0.57
GYPB-210ENST00000508841 PRR20DP86480 221 aa11.48□□□□□ -0.57
GYPB-210ENST00000508841 PRR20BP86481 221 aa11.48□□□□□ -0.57
GYPB-210ENST00000508841 PRR20AP86496 221 aa11.48□□□□□ -0.57
GYPB-210ENST00000508841 ZNF598Q86UK7 904 aaKnown RBP11.48□□□□□ -0.57
GYPB-210ENST00000508841 TRIM32Q13049 653 aa11.47□□□□□ -0.57
GYPB-210ENST00000508841 AGERQ15109 404 aa11.47□□□□□ -0.57
GYPB-210ENST00000508841 SH3RF1Q7Z6J0 888 aa11.47□□□□□ -0.57
GYPB-210ENST00000508841 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
GYPB-210ENST00000508841 FAM187AA6NFU0 413 aa11.45□□□□□ -0.58
GYPB-210ENST00000508841 LINC01559Q495D7 138 aa11.45□□□□□ -0.58
GYPB-210ENST00000508841 ADAM32Q8TC27 787 aa11.44□□□□□ -0.58
GYPB-210ENST00000508841 CDV3Q9UKY7 258 aaKnown RBP11.44□□□□□ -0.58
GYPB-210ENST00000508841 SH3BP2P78314 561 aa11.43□□□□□ -0.58
GYPB-210ENST00000508841 PLA2G2CQ5R387 149 aa11.43□□□□□ -0.58
GYPB-210ENST00000508841 ZNF697Q5TEC3 545 aa11.43□□□□□ -0.58
GYPB-210ENST00000508841 TREML4Q6UXN2 200 aa11.43□□□□□ -0.58
GYPB-210ENST00000508841 ADAMTS19Q8TE59 1207 aa11.43□□□□□ -0.58
GYPB-210ENST00000508841 ARXQ96QS3 562 aa11.43□□□□□ -0.58
GYPB-210ENST00000508841 ARID3AQ99856 593 aa11.43□□□□□ -0.58
GYPB-210ENST00000508841 MAGEB6P1A0A0J9YX57 407 aa11.42□□□□□ -0.58
GYPB-210ENST00000508841 DZIP3Q86Y13 1208 aaKnown RBP11.42□□□□□ -0.58
GYPB-210ENST00000508841 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
GYPB-210ENST00000508841 PCDHB9Q9Y5E1 797 aa11.42□□□□□ -0.58
GYPB-210ENST00000508841 VARSP26640 1264 aaKnown RBP11.41□□□□□ -0.58
GYPB-210ENST00000508841 CARD14Q9BXL6 1004 aa11.41□□□□□ -0.58
GYPB-210ENST00000508841 TNFRSF10AO00220 468 aa11.4□□□□□ -0.58
GYPB-210ENST00000508841 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.58
GYPB-210ENST00000508841 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.58
GYPB-210ENST00000508841 NFATC2IPQ8NCF5 419 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms