RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 VPS72Q15906 364 aa22.34■■□□□ 1.17
DDR1-264ENST00000508472 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
DDR1-264ENST00000508472 POLR3AO14802 1390 aaPredicted RBP22.34■■□□□ 1.17
DDR1-264ENST00000508472 RALGAPBQ86X10 1494 aa22.34■■□□□ 1.17
DDR1-264ENST00000508472 PLEKHG3A1L390 1219 aa22.33■■□□□ 1.17
DDR1-264ENST00000508472 ROCK2O75116 1388 aaKnown RBP22.33■■□□□ 1.17
DDR1-264ENST00000508472 COL14A1Q05707 1796 aaKnown RBP22.33■■□□□ 1.16
DDR1-264ENST00000508472 ACEP12821 1306 aa22.32■■□□□ 1.16
DDR1-264ENST00000508472 NBPF8Q3BBV2 869 aa22.31■■□□□ 1.16
DDR1-264ENST00000508472 GLI3P10071 1580 aa22.3■■□□□ 1.16
DDR1-264ENST00000508472 FAM83GA6ND36 823 aa22.3■■□□□ 1.16
DDR1-264ENST00000508472 CCDC125Q86Z20 511 aa22.3■■□□□ 1.16
DDR1-264ENST00000508472 TRIM26Q12899 539 aaPredicted RBP22.29■■□□□ 1.16
DDR1-264ENST00000508472 PPIP5K1Q6PFW1 1433 aa22.29■■□□□ 1.16
DDR1-264ENST00000508472 EVC2Q86UK5 1308 aa22.29■■□□□ 1.16
DDR1-264ENST00000508472 BRD4O60885 1362 aaPredicted RBP22.28■■□□□ 1.16
DDR1-264ENST00000508472 BTG4Q9NY30 223 aa22.28■■□□□ 1.16
DDR1-264ENST00000508472 PRDM11Q9NQV5 511 aa22.27■■□□□ 1.16
DDR1-264ENST00000508472 CRYBG1Q9Y4K1 1723 aa22.27■■□□□ 1.16
DDR1-264ENST00000508472 CABP2Q9NPB3 220 aa22.26■■□□□ 1.15
DDR1-264ENST00000508472 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
DDR1-264ENST00000508472 ABTB2Q8N961 1025 aa22.25■■□□□ 1.15
DDR1-264ENST00000508472 NRAPQ86VF7 1730 aa22.25■■□□□ 1.15
DDR1-264ENST00000508472 PHRF1Q9P1Y6 1649 aaKnown RBP22.24■■□□□ 1.15
DDR1-264ENST00000508472 ONECUT3O60422 494 aaPredicted RBP22.23■■□□□ 1.15
DDR1-264ENST00000508472 SEPT12Q8IYM1 358 aa22.23■■□□□ 1.15
DDR1-264ENST00000508472 A0A0G2JS52 829 aa22.22■■□□□ 1.15
DDR1-264ENST00000508472 MYT1Q01538 1121 aa22.22■■□□□ 1.15
DDR1-264ENST00000508472 NLRP13Q86W25 1043 aa22.22■■□□□ 1.15
DDR1-264ENST00000508472 BRWD3Q6RI45 1802 aa22.2■■□□□ 1.14
DDR1-264ENST00000508472 NUTM2GQ5VZR2 741 aa22.2■■□□□ 1.14
DDR1-264ENST00000508472 CABP1Q9NZU7 370 aa22.2■■□□□ 1.14
DDR1-264ENST00000508472 KIAA0232Q92628 1395 aa22.2■■□□□ 1.14
DDR1-264ENST00000508472 EP400Q96L91 3159 aa22.19■■□□□ 1.14
DDR1-264ENST00000508472 SF3B2Q13435 895 aaKnown RBP22.18■■□□□ 1.14
DDR1-264ENST00000508472 KRT27Q7Z3Y8 459 aa22.18■■□□□ 1.14
DDR1-264ENST00000508472 CARD11Q9BXL7 1154 aa22.18■■□□□ 1.14
DDR1-264ENST00000508472 ZC3H6P61129 1189 aaKnown RBP22.17■■□□□ 1.14
DDR1-264ENST00000508472 ZNF692Q9BU19 519 aaPredicted RBP22.17■■□□□ 1.14
DDR1-264ENST00000508472 USP6P35125 1406 aa22.16■■□□□ 1.14
DDR1-264ENST00000508472 BLMP54132 1417 aaPredicted RBP22.16■■□□□ 1.14
DDR1-264ENST00000508472 SPATA31A5Q5VU36 1347 aa22.16■■□□□ 1.14
DDR1-264ENST00000508472 SPATA31A7Q8IWB4 1347 aa22.16■■□□□ 1.14
DDR1-264ENST00000508472 FAM98CQ17RN3 349 aaKnown RBP22.16■■□□□ 1.14
DDR1-264ENST00000508472 USP19O94966 1318 aa22.15■■□□□ 1.14
DDR1-264ENST00000508472 EVA1CP58658 441 aa22.15■■□□□ 1.14
DDR1-264ENST00000508472 NRKQ7Z2Y5 1582 aa22.15■■□□□ 1.14
DDR1-264ENST00000508472 CPDO75976 1380 aa22.14■■□□□ 1.14
DDR1-264ENST00000508472 SBNO2Q9Y2G9 1366 aa22.14■■□□□ 1.14
DDR1-264ENST00000508472 CHRNA2Q15822 529 aa22.14■■□□□ 1.13
DDR1-264ENST00000508472 STRN4Q9NRL3 753 aa22.13■■□□□ 1.13
DDR1-264ENST00000508472 GCP02774 474 aa22.12■■□□□ 1.13
DDR1-264ENST00000508472 NLRP6P59044 892 aa22.12■■□□□ 1.13
DDR1-264ENST00000508472 ZRANB1Q9UGI0 708 aa22.11■■□□□ 1.13
DDR1-264ENST00000508472 SLC24A1O60721 1099 aa22.1■■□□□ 1.13
DDR1-264ENST00000508472 AKAP12Q02952 1782 aa22.1■■□□□ 1.13
DDR1-264ENST00000508472 SPATA31A1Q5TZJ5 1347 aa22.09■■□□□ 1.13
DDR1-264ENST00000508472 TTC21AQ8NDW8 1320 aa22.08■■□□□ 1.13
DDR1-264ENST00000508472 SSH2Q76I76 1423 aa22.07■■□□□ 1.12
DDR1-264ENST00000508472 THSD7AQ9UPZ6 1657 aa22.07■■□□□ 1.12
DDR1-264ENST00000508472 KCNH5Q8NCM2 988 aa22.06■■□□□ 1.12
DDR1-264ENST00000508472 KTN1Q86UP2 1357 aaKnown RBP22.06■■□□□ 1.12
DDR1-264ENST00000508472 LMO7Q8WWI1 1683 aa22.05■■□□□ 1.12
DDR1-264ENST00000508472 SLIT3O75094 1523 aa22.05■■□□□ 1.12
DDR1-264ENST00000508472 TTC21BQ7Z4L5 1316 aa22.05■■□□□ 1.12
DDR1-264ENST00000508472 PIK3C2AO00443 1686 aa22.04■■□□□ 1.12
DDR1-264ENST00000508472 CAMTA1Q9Y6Y1 1673 aa22.04■■□□□ 1.12
DDR1-264ENST00000508472 BARGINQ6ZT62 677 aa22.04■■□□□ 1.12
DDR1-264ENST00000508472 THRAP3Q9Y2W1 955 aaKnown RBP22.04■■□□□ 1.12
DDR1-264ENST00000508472 CPSF1Q10570 1443 aaKnown RBP22.04■■□□□ 1.12
DDR1-264ENST00000508472 ZBTB7CA1YPR0 619 aa22.03■■□□□ 1.12
DDR1-264ENST00000508472 BAG6P46379 1132 aa22.03■■□□□ 1.12
DDR1-264ENST00000508472 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
DDR1-264ENST00000508472 AATKQ6ZMQ8 1374 aa22.02■■□□□ 1.12
DDR1-264ENST00000508472 HDGFL2Q7Z4V5 671 aaPredicted RBP22.02■■□□□ 1.12
DDR1-264ENST00000508472 TCP11L2Q8N4U5 519 aa22.02■■□□□ 1.12
DDR1-264ENST00000508472 PUS7Q96PZ0 661 aaKnown RBP22.02■■□□□ 1.12
DDR1-264ENST00000508472 RGPD1P0DJD0 1748 aa22.02■■□□□ 1.12
DDR1-264ENST00000508472 MON2Q7Z3U7 1717 aa22.01■■□□□ 1.11
DDR1-264ENST00000508472 LARP1Q6PKG0 1096 aaKnown RBP22.01■■□□□ 1.11
DDR1-264ENST00000508472 TMC1Q8TDI8 760 aa22.01■■□□□ 1.11
DDR1-264ENST00000508472 PDE3BQ13370 1112 aa22■■□□□ 1.11
DDR1-264ENST00000508472 TERF2IPQ9NYB0 399 aa22■■□□□ 1.11
DDR1-264ENST00000508472 COL5A2P05997 1499 aaPredicted RBP22■■□□□ 1.11
DDR1-264ENST00000508472 FAM196AQ6ZSG2 479 aa21.99■■□□□ 1.11
DDR1-264ENST00000508472 CRB1P82279 1406 aa21.98■■□□□ 1.11
DDR1-264ENST00000508472 C11orf95C9JLR9 678 aaPredicted RBP21.97■■□□□ 1.11
DDR1-264ENST00000508472 DEFB132Q7Z7B7 95 aa21.97■■□□□ 1.11
DDR1-264ENST00000508472 NINLQ9Y2I6 1382 aa21.97■■□□□ 1.11
DDR1-264ENST00000508472 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
DDR1-264ENST00000508472 TOM1L2Q6ZVM7 507 aa21.94■■□□□ 1.1
DDR1-264ENST00000508472 ARHGEF25Q86VW2 580 aa21.94■■□□□ 1.1
DDR1-264ENST00000508472 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.94■■□□□ 1.1
DDR1-264ENST00000508472 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
DDR1-264ENST00000508472 ST20-MTHFSA0A0A6YYL1 179 aa21.93■■□□□ 1.1
DDR1-264ENST00000508472 SOX12O15370 315 aa21.93■■□□□ 1.1
DDR1-264ENST00000508472 ABCC6O95255 1503 aa21.93■■□□□ 1.1
DDR1-264ENST00000508472 FAM182BQ5T319 152 aa21.93■■□□□ 1.1
DDR1-264ENST00000508472 EDC4Q6P2E9 1401 aaKnown RBP21.93■■□□□ 1.1
DDR1-264ENST00000508472 COL18A1P39060 1754 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms