RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 EP400Q96L91 3159 aa18.49■□□□□ 0.55
NR1I3-225ENST00000508387 PAK3O75914 559 aaPredicted RBP18.48■□□□□ 0.55
NR1I3-225ENST00000508387 UNC5CLQ8IV45 518 aa18.47■□□□□ 0.55
NR1I3-225ENST00000508387 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
NR1I3-225ENST00000508387 POLR3AO14802 1390 aaPredicted RBP18.46■□□□□ 0.55
NR1I3-225ENST00000508387 ROCK2O75116 1388 aaKnown RBP18.46■□□□□ 0.55
NR1I3-225ENST00000508387 GJD4Q96KN9 370 aaPredicted RBP18.46■□□□□ 0.55
NR1I3-225ENST00000508387 PPIP5K1Q6PFW1 1433 aa18.46■□□□□ 0.55
NR1I3-225ENST00000508387 BRWD3Q6RI45 1802 aa18.46■□□□□ 0.55
NR1I3-225ENST00000508387 ACEP12821 1306 aa18.46■□□□□ 0.55
NR1I3-225ENST00000508387 COL14A1Q05707 1796 aaKnown RBP18.45■□□□□ 0.54
NR1I3-225ENST00000508387 FAM83GA6ND36 823 aa18.45■□□□□ 0.54
NR1I3-225ENST00000508387 NUTM2GQ5VZR2 741 aa18.45■□□□□ 0.54
NR1I3-225ENST00000508387 SRPK2P78362 688 aaKnown RBP18.44■□□□□ 0.54
NR1I3-225ENST00000508387 NRKQ7Z2Y5 1582 aa18.43■□□□□ 0.54
NR1I3-225ENST00000508387 CCDC61Q9Y6R9 512 aa18.43■□□□□ 0.54
NR1I3-225ENST00000508387 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
NR1I3-225ENST00000508387 PLEKHG3A1L390 1219 aa18.41■□□□□ 0.54
NR1I3-225ENST00000508387 ATAD2Q6PL18 1390 aa18.41■□□□□ 0.54
NR1I3-225ENST00000508387 VPS72Q15906 364 aa18.39■□□□□ 0.53
NR1I3-225ENST00000508387 BTG4Q9NY30 223 aa18.39■□□□□ 0.53
NR1I3-225ENST00000508387 CCDC9Q9Y3X0 531 aaKnown RBP18.39■□□□□ 0.53
NR1I3-225ENST00000508387 KIAA0232Q92628 1395 aa18.39■□□□□ 0.53
NR1I3-225ENST00000508387 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
NR1I3-225ENST00000508387 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
NR1I3-225ENST00000508387 PIK3C2AO00443 1686 aa18.37■□□□□ 0.53
NR1I3-225ENST00000508387 AKAP12Q02952 1782 aa18.36■□□□□ 0.53
NR1I3-225ENST00000508387 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
NR1I3-225ENST00000508387 USP6P35125 1406 aa18.35■□□□□ 0.53
NR1I3-225ENST00000508387 ZC3H6P61129 1189 aaKnown RBP18.35■□□□□ 0.53
NR1I3-225ENST00000508387 SEPT12Q8IYM1 358 aa18.35■□□□□ 0.53
NR1I3-225ENST00000508387 PRDM11Q9NQV5 511 aa18.35■□□□□ 0.53
NR1I3-225ENST00000508387 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
NR1I3-225ENST00000508387 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
NR1I3-225ENST00000508387 USP19O94966 1318 aa18.33■□□□□ 0.53
NR1I3-225ENST00000508387 ABTB2Q8N961 1025 aa18.33■□□□□ 0.52
NR1I3-225ENST00000508387 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.52
NR1I3-225ENST00000508387 FAM98CQ17RN3 349 aaKnown RBP18.32■□□□□ 0.52
NR1I3-225ENST00000508387 CARD11Q9BXL7 1154 aa18.32■□□□□ 0.52
NR1I3-225ENST00000508387 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
NR1I3-225ENST00000508387 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
NR1I3-225ENST00000508387 MON2Q7Z3U7 1717 aa18.29■□□□□ 0.52
NR1I3-225ENST00000508387 SLIT3O75094 1523 aa18.29■□□□□ 0.52
NR1I3-225ENST00000508387 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
NR1I3-225ENST00000508387 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
NR1I3-225ENST00000508387 A0A0G2JS52 829 aa18.29■□□□□ 0.52
NR1I3-225ENST00000508387 MYT1Q01538 1121 aa18.29■□□□□ 0.52
NR1I3-225ENST00000508387 STRN4Q9NRL3 753 aa18.29■□□□□ 0.52
NR1I3-225ENST00000508387 ONECUT3O60422 494 aaPredicted RBP18.28■□□□□ 0.52
NR1I3-225ENST00000508387 SBNO2Q9Y2G9 1366 aa18.27■□□□□ 0.51
NR1I3-225ENST00000508387 CD163L1Q9NR16 1453 aa18.26■□□□□ 0.51
NR1I3-225ENST00000508387 FAM182BQ5T319 152 aa18.26■□□□□ 0.51
NR1I3-225ENST00000508387 KRT27Q7Z3Y8 459 aa18.26■□□□□ 0.51
NR1I3-225ENST00000508387 CPDO75976 1380 aa18.26■□□□□ 0.51
NR1I3-225ENST00000508387 SPATA31A1Q5TZJ5 1347 aa18.25■□□□□ 0.51
NR1I3-225ENST00000508387 CPSF1Q10570 1443 aaKnown RBP18.25■□□□□ 0.51
NR1I3-225ENST00000508387 ZBTB7CA1YPR0 619 aa18.25■□□□□ 0.51
NR1I3-225ENST00000508387 GCP02774 474 aa18.25■□□□□ 0.51
NR1I3-225ENST00000508387 BLMP54132 1417 aaPredicted RBP18.24■□□□□ 0.51
NR1I3-225ENST00000508387 NLRP6P59044 892 aa18.24■□□□□ 0.51
NR1I3-225ENST00000508387 NLRP13Q86W25 1043 aa18.24■□□□□ 0.51
NR1I3-225ENST00000508387 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
NR1I3-225ENST00000508387 COL5A2P05997 1499 aaPredicted RBP18.24■□□□□ 0.51
NR1I3-225ENST00000508387 COL18A1P39060 1754 aa18.24■□□□□ 0.51
NR1I3-225ENST00000508387 TTC21BQ7Z4L5 1316 aa18.23■□□□□ 0.51
NR1I3-225ENST00000508387 LARP1Q6PKG0 1096 aaKnown RBP18.23■□□□□ 0.51
NR1I3-225ENST00000508387 DEFB132Q7Z7B7 95 aa18.23■□□□□ 0.51
NR1I3-225ENST00000508387 USP35Q9P2H5 1018 aa18.23■□□□□ 0.51
NR1I3-225ENST00000508387 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
NR1I3-225ENST00000508387 KTN1Q86UP2 1357 aaKnown RBP18.21■□□□□ 0.51
NR1I3-225ENST00000508387 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
NR1I3-225ENST00000508387 NFAT5O94916 1531 aa18.21■□□□□ 0.51
NR1I3-225ENST00000508387 TNS1Q9HBL0 1735 aaKnown RBP18.2■□□□□ 0.5
NR1I3-225ENST00000508387 SOX12O15370 315 aa18.2■□□□□ 0.5
NR1I3-225ENST00000508387 USP54Q70EL1 1684 aa18.19■□□□□ 0.5
NR1I3-225ENST00000508387 TESK2Q96S53 571 aa18.19■□□□□ 0.5
NR1I3-225ENST00000508387 ST20-MTHFSA0A0A6YYL1 179 aa18.18■□□□□ 0.5
NR1I3-225ENST00000508387 EVA1CP58658 441 aa18.18■□□□□ 0.5
NR1I3-225ENST00000508387 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
NR1I3-225ENST00000508387 WNK3Q9BYP7 1800 aa18.18■□□□□ 0.5
NR1I3-225ENST00000508387 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
NR1I3-225ENST00000508387 CCDC125Q86Z20 511 aa18.17■□□□□ 0.5
NR1I3-225ENST00000508387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
NR1I3-225ENST00000508387 TMC1Q8TDI8 760 aa18.17■□□□□ 0.5
NR1I3-225ENST00000508387 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
NR1I3-225ENST00000508387 NME9Q86XW9 330 aa18.16■□□□□ 0.5
NR1I3-225ENST00000508387 ZNF692Q9BU19 519 aaPredicted RBP18.16■□□□□ 0.5
NR1I3-225ENST00000508387 PCGF6Q9BYE7 350 aa18.16■□□□□ 0.5
NR1I3-225ENST00000508387 AXIN2Q9Y2T1 843 aa18.16■□□□□ 0.5
NR1I3-225ENST00000508387 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
NR1I3-225ENST00000508387 LRRC37A3O60309 1634 aa18.16■□□□□ 0.5
NR1I3-225ENST00000508387 AATKQ6ZMQ8 1374 aa18.16■□□□□ 0.5
NR1I3-225ENST00000508387 PARP4Q9UKK3 1724 aaKnown RBP18.15■□□□□ 0.5
NR1I3-225ENST00000508387 USP47Q96K76 1375 aa18.14■□□□□ 0.49
NR1I3-225ENST00000508387 LTN1O94822 1766 aa18.14■□□□□ 0.49
NR1I3-225ENST00000508387 CRB1P82279 1406 aa18.14■□□□□ 0.49
NR1I3-225ENST00000508387 SRCAPQ6ZRS2 3230 aa18.13■□□□□ 0.49
NR1I3-225ENST00000508387 BARGINQ6ZT62 677 aa18.13■□□□□ 0.49
NR1I3-225ENST00000508387 TCP11L2Q8N4U5 519 aa18.13■□□□□ 0.49
NR1I3-225ENST00000508387 ARHGEF25Q86VW2 580 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms