RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 SEMA3FQ13275 785 aa5.96□□□□□ -1.46
ATP2C1-213ENST00000508297 NAALADL2Q58DX5 795 aa5.96□□□□□ -1.46
ATP2C1-213ENST00000508297 PRPF38BQ5VTL8 546 aaKnown RBP5.96□□□□□ -1.46
ATP2C1-213ENST00000508297 TYW1BQ6NUM6 668 aa5.96□□□□□ -1.46
ATP2C1-213ENST00000508297 NBPF3Q9H094 633 aa5.96□□□□□ -1.46
ATP2C1-213ENST00000508297 PIK3CDO00329 1044 aa5.95□□□□□ -1.46
ATP2C1-213ENST00000508297 RECKO95980 971 aa5.95□□□□□ -1.46
ATP2C1-213ENST00000508297 PTPREP23469 700 aa5.95□□□□□ -1.46
ATP2C1-213ENST00000508297 CANXP27824 592 aaKnown RBP5.95□□□□□ -1.46
ATP2C1-213ENST00000508297 ZC3H6P61129 1189 aaKnown RBP5.95□□□□□ -1.46
ATP2C1-213ENST00000508297 LAPTM4AQ15012 233 aa5.95□□□□□ -1.46
ATP2C1-213ENST00000508297 ZNF454Q8N9F8 522 aa5.95□□□□□ -1.46
ATP2C1-213ENST00000508297 VAMP1P23763 118 aa5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 FAM69CQ0P6D2 419 aa5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 C6orf132Q5T0Z8 1188 aa5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 GIMAP6Q6P9H5 292 aa5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 RBM46Q8TBY0 533 aaKnown RBP5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 UBXN4Q92575 508 aa5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 ZBTB3Q9H5J0 574 aa5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 BCL2L12Q9HB09 334 aa5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 FAM198AQ9UFP1 575 aa5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 PCDHGC3Q9UN70 934 aa5.94□□□□□ -1.46
ATP2C1-213ENST00000508297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.93□□□□□ -1.46
ATP2C1-213ENST00000508297 C3orf80F5H4A9 247 aa5.93□□□□□ -1.46
ATP2C1-213ENST00000508297 SOX11P35716 441 aa5.93□□□□□ -1.46
ATP2C1-213ENST00000508297 GUCA2AQ02747 115 aa5.93□□□□□ -1.46
ATP2C1-213ENST00000508297 HLA-CQ95604 372 aa5.93□□□□□ -1.46
ATP2C1-213ENST00000508297 BIN2Q9UBW5 565 aaPredicted RBP5.93□□□□□ -1.46
ATP2C1-213ENST00000508297 BHMG1C9JSJ3 638 aaPredicted RBP5.92□□□□□ -1.46
ATP2C1-213ENST00000508297 FBXO33Q7Z6M2 555 aa5.92□□□□□ -1.46
ATP2C1-213ENST00000508297 TSC1Q92574 1164 aa5.92□□□□□ -1.46
ATP2C1-213ENST00000508297 EYA1Q99502 592 aa5.92□□□□□ -1.46
ATP2C1-213ENST00000508297 NR6A1Q15406 480 aa5.91□□□□□ -1.46
ATP2C1-213ENST00000508297 CRTC2Q53ET0 693 aaPredicted RBP5.91□□□□□ -1.46
ATP2C1-213ENST00000508297 ZNF326Q5BKZ1 582 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-213ENST00000508297 ZNF662Q6ZS27 426 aa5.91□□□□□ -1.46
ATP2C1-213ENST00000508297 CERKQ8TCT0 537 aa5.91□□□□□ -1.46
ATP2C1-213ENST00000508297 RBM27Q9P2N5 1060 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-213ENST00000508297 ANKRD62A6NC57 917 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 USP17L3A6NCW0 530 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 USP17L4A6NCW7 530 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 CFAP99D6REC4 459 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 FDX1P10109 184 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 PRSS12P56730 875 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 USP17L2Q6R6M4 530 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 USP17L1Q7RTZ2 530 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 SULF1Q8IWU6 871 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 DEPDC4Q8N2C3 294 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 ANKK1Q8NFD2 765 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 CDCA7LQ96GN5 454 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 ZBED2Q9BTP6 218 aa5.9□□□□□ -1.46
ATP2C1-213ENST00000508297 USP17L15C9J2P7 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L10C9JJH3 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L13C9JLJ4 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L12C9JPN9 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L11C9JVI0 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L21D6R901 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L18D6R9N7 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L22D6RA61 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L17D6RBQ6 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L19D6RCP7 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L20D6RJB6 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 HOXA2O43364 376 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 KDM4AO75164 1064 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 ITGBL1O95965 494 aaPredicted RBP5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 ATP2B4P23634 1241 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L24Q0WX57 530 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 TSNAXIP1Q2TAA8 658 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 C9orf131Q5VYM1 1079 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 NYAP1Q6ZVC0 841 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 DPH6Q7L8W6 267 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 ANKRD13AQ8IZ07 590 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 CLP1Q92989 425 aaKnown RBP5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 JPH4Q96JJ6 628 aa5.89□□□□□ -1.47
ATP2C1-213ENST00000508297 PTK7Q13308 1070 aa5.88□□□□□ -1.47
ATP2C1-213ENST00000508297 FAM174AQ8TBP5 190 aa5.88□□□□□ -1.47
ATP2C1-213ENST00000508297 HIRIP3Q9BW71 556 aaPredicted RBP5.88□□□□□ -1.47
ATP2C1-213ENST00000508297 FAM196BA6NMK8 535 aa5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 SKIP12755 728 aa5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 ERCC5P28715 1186 aaPredicted RBP5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 FOSBP53539 338 aa5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 EIF4G2P78344 907 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 KCNC4Q03721 635 aa5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 SF3A1Q15459 793 aaKnown RBP5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 TRAF7Q6Q0C0 670 aa5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 HELBQ8NG08 1087 aaPredicted RBP5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 ANO2Q9NQ90 1003 aa5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 MKRN1Q9UHC7 482 aaKnown RBP5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 ZC3H4Q9UPT8 1303 aaKnown RBP5.87□□□□□ -1.47
ATP2C1-213ENST00000508297 USP17L5A8MUK1 530 aa5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 PPP1R3GB7ZBB8 358 aa5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 PER1O15534 1290 aaPredicted RBP5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 NCLP19338 710 aaKnown RBP5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 HDLBPQ00341 1268 aaKnown RBP5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 MTMR2Q13614 643 aa5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 RDH13Q8NBN7 331 aa5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 FAM200AQ8TCP9 573 aa5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 BACH2Q9BYV9 841 aa5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 ADAM33Q9BZ11 813 aa5.86□□□□□ -1.47
ATP2C1-213ENST00000508297 RASA1P20936 1047 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms