RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 EVC2Q86UK5 1308 aa31.38■■■□□ 2.61
SNCB-204ENST00000508006 ANKARQ7Z5J8 1434 aa31.38■■■□□ 2.61
SNCB-204ENST00000508006 TULP4Q9NRJ4 1543 aa31.38■■■□□ 2.61
SNCB-204ENST00000508006 TNS3Q68CZ2 1445 aa31.37■■■□□ 2.61
SNCB-204ENST00000508006 USP32Q8NFA0 1604 aa31.36■■■□□ 2.61
SNCB-204ENST00000508006 SEPT12Q8IYM1 358 aa31.36■■■□□ 2.61
SNCB-204ENST00000508006 TESK2Q96S53 571 aa31.36■■■□□ 2.61
SNCB-204ENST00000508006 GLI3P10071 1580 aa31.35■■■□□ 2.61
SNCB-204ENST00000508006 ITSN1Q15811 1721 aa31.35■■■□□ 2.61
SNCB-204ENST00000508006 VPS72Q15906 364 aa31.34■■■□□ 2.61
SNCB-204ENST00000508006 PMFBP1Q8TBY8 1022 aa31.34■■■□□ 2.61
SNCB-204ENST00000508006 BLMP54132 1417 aaPredicted RBP31.33■■■□□ 2.61
SNCB-204ENST00000508006 CDK19Q9BWU1 502 aa31.33■■■□□ 2.61
SNCB-204ENST00000508006 SBNO1A3KN83 1393 aa31.32■■■□□ 2.6
SNCB-204ENST00000508006 ARHGEF10O15013 1369 aa31.31■■■□□ 2.6
SNCB-204ENST00000508006 HSPA5P11021 654 aaKnown RBP31.31■■■□□ 2.6
SNCB-204ENST00000508006 PUS7Q96PZ0 661 aaKnown RBP31.31■■■□□ 2.6
SNCB-204ENST00000508006 A0A0G2JS52 829 aa31.3■■■□□ 2.6
SNCB-204ENST00000508006 MYT1Q01538 1121 aa31.3■■■□□ 2.6
SNCB-204ENST00000508006 BRWD3Q6RI45 1802 aa31.28■■■□□ 2.6
SNCB-204ENST00000508006 TMF1P82094 1093 aa31.28■■■□□ 2.6
SNCB-204ENST00000508006 DEFB132Q7Z7B7 95 aa31.28■■■□□ 2.6
SNCB-204ENST00000508006 TOPAZ1Q8N9V7 1692 aa31.28■■■□□ 2.6
SNCB-204ENST00000508006 ATP7BP35670 1465 aa31.27■■■□□ 2.6
SNCB-204ENST00000508006 KRT27Q7Z3Y8 459 aa31.27■■■□□ 2.6
SNCB-204ENST00000508006 FAM83GA6ND36 823 aa31.26■■■□□ 2.59
SNCB-204ENST00000508006 SRPK2P78362 688 aaKnown RBP31.26■■■□□ 2.59
SNCB-204ENST00000508006 ONECUT3O60422 494 aaPredicted RBP31.25■■■□□ 2.59
SNCB-204ENST00000508006 CDCA8Q53HL2 280 aa31.25■■■□□ 2.59
SNCB-204ENST00000508006 NUDT16Q96DE0 195 aaKnown RBP31.24■■■□□ 2.59
SNCB-204ENST00000508006 NWD2Q9ULI1 1742 aa31.23■■■□□ 2.59
SNCB-204ENST00000508006 PLCH1Q4KWH8 1693 aa31.22■■■□□ 2.59
SNCB-204ENST00000508006 CCDC61Q9Y6R9 512 aa31.22■■■□□ 2.59
SNCB-204ENST00000508006 PRR36Q9H6K5 1346 aa31.22■■■□□ 2.59
SNCB-204ENST00000508006 CABP2Q9NPB3 220 aa31.2■■■□□ 2.59
SNCB-204ENST00000508006 BTG4Q9NY30 223 aa31.2■■■□□ 2.59
SNCB-204ENST00000508006 FAM98CQ17RN3 349 aaKnown RBP31.17■■■□□ 2.58
SNCB-204ENST00000508006 PAK3O75914 559 aaPredicted RBP31.16■■■□□ 2.58
SNCB-204ENST00000508006 NGDNQ8NEJ9 315 aaKnown RBP31.16■■■□□ 2.58
SNCB-204ENST00000508006 ABCA3Q99758 1704 aa31.15■■■□□ 2.58
SNCB-204ENST00000508006 PLEKHG3A1L390 1219 aa31.14■■■□□ 2.58
SNCB-204ENST00000508006 BAG6P46379 1132 aa31.14■■■□□ 2.58
SNCB-204ENST00000508006 NINLQ9Y2I6 1382 aa31.14■■■□□ 2.58
SNCB-204ENST00000508006 PPIP5K1Q6PFW1 1433 aa31.14■■■□□ 2.58
SNCB-204ENST00000508006 POLR3AO14802 1390 aaPredicted RBP31.1■■■□□ 2.57
SNCB-204ENST00000508006 TRPM3Q9HCF6 1732 aaPredicted RBP31.07■■■□□ 2.56
SNCB-204ENST00000508006 PRDM11Q9NQV5 511 aa31.06■■■□□ 2.56
SNCB-204ENST00000508006 CABP1Q9NZU7 370 aa31.06■■■□□ 2.56
SNCB-204ENST00000508006 AKAP12Q02952 1782 aa31.06■■■□□ 2.56
SNCB-204ENST00000508006 COL14A1Q05707 1796 aaKnown RBP31.05■■■□□ 2.56
SNCB-204ENST00000508006 MYOM1P52179 1685 aa31.04■■■□□ 2.56
SNCB-204ENST00000508006 PSDA5PKW4 1024 aaPredicted RBP31.04■■■□□ 2.56
SNCB-204ENST00000508006 ACEP12821 1306 aa31.03■■■□□ 2.56
SNCB-204ENST00000508006 FAM182BQ5T319 152 aa31.03■■■□□ 2.56
SNCB-204ENST00000508006 NRAPQ86VF7 1730 aa31.03■■■□□ 2.56
SNCB-204ENST00000508006 BRD4O60885 1362 aaPredicted RBP31.03■■■□□ 2.56
SNCB-204ENST00000508006 ALS2Q96Q42 1657 aa31.03■■■□□ 2.56
SNCB-204ENST00000508006 SPATA31A5Q5VU36 1347 aa31.02■■■□□ 2.56
SNCB-204ENST00000508006 SPATA31A7Q8IWB4 1347 aa31.02■■■□□ 2.56
SNCB-204ENST00000508006 ZNF692Q9BU19 519 aaPredicted RBP31.02■■■□□ 2.56
SNCB-204ENST00000508006 CPSF1Q10570 1443 aaKnown RBP31■■■□□ 2.55
SNCB-204ENST00000508006 EN1Q05925 392 aaPredicted RBP31■■■□□ 2.55
SNCB-204ENST00000508006 C11orf95C9JLR9 678 aaPredicted RBP30.99■■■□□ 2.55
SNCB-204ENST00000508006 TMC1Q8TDI8 760 aa30.99■■■□□ 2.55
SNCB-204ENST00000508006 TERF2IPQ9NYB0 399 aa30.99■■■□□ 2.55
SNCB-204ENST00000508006 MON2Q7Z3U7 1717 aa30.98■■■□□ 2.55
SNCB-204ENST00000508006 SLC12A5Q9H2X9 1139 aa30.97■■■□□ 2.55
SNCB-204ENST00000508006 KIF7Q2M1P5 1343 aa30.97■■■□□ 2.55
SNCB-204ENST00000508006 CD163L1Q9NR16 1453 aa30.96■■■□□ 2.55
SNCB-204ENST00000508006 STRN4Q9NRL3 753 aa30.96■■■□□ 2.55
SNCB-204ENST00000508006 HDGFL2Q7Z4V5 671 aaPredicted RBP30.95■■■□□ 2.55
SNCB-204ENST00000508006 ANKRD36BQ8N2N9 1353 aa30.94■■■□□ 2.54
SNCB-204ENST00000508006 USP6P35125 1406 aa30.94■■■□□ 2.54
SNCB-204ENST00000508006 CHRNA2Q15822 529 aa30.94■■■□□ 2.54
SNCB-204ENST00000508006 ZC3H6P61129 1189 aaKnown RBP30.93■■■□□ 2.54
SNCB-204ENST00000508006 NUTM2GQ5VZR2 741 aa30.93■■■□□ 2.54
SNCB-204ENST00000508006 KIAA0232Q92628 1395 aa30.92■■■□□ 2.54
SNCB-204ENST00000508006 CCDC7Q96M83 1385 aa30.92■■■□□ 2.54
SNCB-204ENST00000508006 EVA1CP58658 441 aa30.92■■■□□ 2.54
SNCB-204ENST00000508006 NRKQ7Z2Y5 1582 aa30.92■■■□□ 2.54
SNCB-204ENST00000508006 KTN1Q86UP2 1357 aaKnown RBP30.92■■■□□ 2.54
SNCB-204ENST00000508006 RGPD1P0DJD0 1748 aa30.91■■■□□ 2.54
SNCB-204ENST00000508006 SPATA31A1Q5TZJ5 1347 aa30.91■■■□□ 2.54
SNCB-204ENST00000508006 WASHC2AQ641Q2 1341 aa30.9■■■□□ 2.54
SNCB-204ENST00000508006 A0A1W2PP64 1363 aa30.9■■■□□ 2.54
SNCB-204ENST00000508006 LRP5O75197 1615 aa30.89■■■□□ 2.54
SNCB-204ENST00000508006 POLR3GLQ9BT43 218 aa30.89■■■□□ 2.54
SNCB-204ENST00000508006 USP35Q9P2H5 1018 aa30.89■■■□□ 2.54
SNCB-204ENST00000508006 SSH2Q76I76 1423 aa30.89■■■□□ 2.53
SNCB-204ENST00000508006 R3HDM1Q15032 1099 aaKnown RBP30.88■■■□□ 2.53
SNCB-204ENST00000508006 FAM196AQ6ZSG2 479 aa30.88■■■□□ 2.53
SNCB-204ENST00000508006 CRYBG1Q9Y4K1 1723 aa30.87■■■□□ 2.53
SNCB-204ENST00000508006 EDC4Q6P2E9 1401 aaKnown RBP30.87■■■□□ 2.53
SNCB-204ENST00000508006 TRIM37O94972 964 aa30.86■■■□□ 2.53
SNCB-204ENST00000508006 TTC21AQ8NDW8 1320 aa30.85■■■□□ 2.53
SNCB-204ENST00000508006 EZH2Q15910 746 aaKnown RBP30.85■■■□□ 2.53
SNCB-204ENST00000508006 ABTB2Q8N961 1025 aa30.85■■■□□ 2.53
SNCB-204ENST00000508006 THSD7AQ9UPZ6 1657 aa30.84■■■□□ 2.53
SNCB-204ENST00000508006 PDE3BQ13370 1112 aa30.83■■■□□ 2.53
SNCB-204ENST00000508006 APBA3O96018 575 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms