RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 MON2Q7Z3U7 1717 aa23.06■■□□□ 1.28
DDR1-261ENST00000507901 MARF1Q9Y4F3 1742 aaKnown RBP23.05■■□□□ 1.28
DDR1-261ENST00000507901 ARHGEF10O15013 1369 aa23.05■■□□□ 1.28
DDR1-261ENST00000507901 USP6P35125 1406 aa23.05■■□□□ 1.28
DDR1-261ENST00000507901 BRD4O60885 1362 aaPredicted RBP23.04■■□□□ 1.28
DDR1-261ENST00000507901 ZNF772Q68DY9 489 aaPredicted RBP23.04■■□□□ 1.28
DDR1-261ENST00000507901 MYOM1P52179 1685 aa23.01■■□□□ 1.27
DDR1-261ENST00000507901 HSPA5P11021 654 aaKnown RBP23.01■■□□□ 1.27
DDR1-261ENST00000507901 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.27
DDR1-261ENST00000507901 TMF1P82094 1093 aa23■■□□□ 1.27
DDR1-261ENST00000507901 NINLQ9Y2I6 1382 aa23■■□□□ 1.27
DDR1-261ENST00000507901 PIK3C2AO00443 1686 aa22.99■■□□□ 1.27
DDR1-261ENST00000507901 PHRF1Q9P1Y6 1649 aaKnown RBP22.98■■□□□ 1.27
DDR1-261ENST00000507901 ZNF692Q9BU19 519 aaPredicted RBP22.96■■□□□ 1.27
DDR1-261ENST00000507901 SLC12A5Q9H2X9 1139 aa22.96■■□□□ 1.27
DDR1-261ENST00000507901 USP54Q70EL1 1684 aa22.96■■□□□ 1.27
DDR1-261ENST00000507901 A0A1W2PP64 1363 aa22.95■■□□□ 1.26
DDR1-261ENST00000507901 AFF2P51816 1311 aa22.94■■□□□ 1.26
DDR1-261ENST00000507901 USP19O94966 1318 aa22.93■■□□□ 1.26
DDR1-261ENST00000507901 C8orf37Q96NL8 207 aa22.93■■□□□ 1.26
DDR1-261ENST00000507901 KTN1Q86UP2 1357 aaKnown RBP22.92■■□□□ 1.26
DDR1-261ENST00000507901 PAK3O75914 559 aaPredicted RBP22.92■■□□□ 1.26
DDR1-261ENST00000507901 ADAMTS2O95450 1211 aa22.92■■□□□ 1.26
DDR1-261ENST00000507901 CABLES1Q8TDN4 633 aa22.92■■□□□ 1.26
DDR1-261ENST00000507901 TTC21BQ7Z4L5 1316 aa22.91■■□□□ 1.26
DDR1-261ENST00000507901 CDCA8Q53HL2 280 aa22.91■■□□□ 1.26
DDR1-261ENST00000507901 SLIT3O75094 1523 aa22.91■■□□□ 1.26
DDR1-261ENST00000507901 ANKRD36BQ8N2N9 1353 aa22.9■■□□□ 1.26
DDR1-261ENST00000507901 LMOD2Q6P5Q4 547 aa22.9■■□□□ 1.26
DDR1-261ENST00000507901 NGLY1Q96IV0 654 aa22.9■■□□□ 1.26
DDR1-261ENST00000507901 EDC4Q6P2E9 1401 aaKnown RBP22.9■■□□□ 1.26
DDR1-261ENST00000507901 TTC21AQ8NDW8 1320 aa22.89■■□□□ 1.26
DDR1-261ENST00000507901 SLIT2O94813 1529 aa22.89■■□□□ 1.26
DDR1-261ENST00000507901 RXRBP28702 533 aa22.89■■□□□ 1.25
DDR1-261ENST00000507901 TMC1Q8TDI8 760 aa22.89■■□□□ 1.25
DDR1-261ENST00000507901 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.88■■□□□ 1.25
DDR1-261ENST00000507901 PLCH1Q4KWH8 1693 aa22.88■■□□□ 1.25
DDR1-261ENST00000507901 C11orf95C9JLR9 678 aaPredicted RBP22.88■■□□□ 1.25
DDR1-261ENST00000507901 FNBP4Q8N3X1 1017 aaPredicted RBP22.88■■□□□ 1.25
DDR1-261ENST00000507901 ABTB2Q8N961 1025 aa22.88■■□□□ 1.25
DDR1-261ENST00000507901 NWD2Q9ULI1 1742 aa22.87■■□□□ 1.25
DDR1-261ENST00000507901 BCL9LQ86UU0 1499 aa22.86■■□□□ 1.25
DDR1-261ENST00000507901 TERF2IPQ9NYB0 399 aa22.86■■□□□ 1.25
DDR1-261ENST00000507901 USP31Q70CQ4 1352 aa22.86■■□□□ 1.25
DDR1-261ENST00000507901 NUTM2GQ5VZR2 741 aa22.85■■□□□ 1.25
DDR1-261ENST00000507901 HDGFL2Q7Z4V5 671 aaPredicted RBP22.85■■□□□ 1.25
DDR1-261ENST00000507901 QTRT2Q9H974 415 aaKnown RBP22.85■■□□□ 1.25
DDR1-261ENST00000507901 COL14A1Q05707 1796 aaKnown RBP22.85■■□□□ 1.25
DDR1-261ENST00000507901 NRAPQ86VF7 1730 aa22.85■■□□□ 1.25
DDR1-261ENST00000507901 CPDO75976 1380 aa22.82■■□□□ 1.24
DDR1-261ENST00000507901 NLRP13Q86W25 1043 aa22.82■■□□□ 1.24
DDR1-261ENST00000507901 NFAT5O94916 1531 aa22.82■■□□□ 1.24
DDR1-261ENST00000507901 LMO7Q8WWI1 1683 aa22.81■■□□□ 1.24
DDR1-261ENST00000507901 RBM6P78332 1123 aaKnown RBP22.81■■□□□ 1.24
DDR1-261ENST00000507901 USP21Q9UK80 565 aa22.81■■□□□ 1.24
DDR1-261ENST00000507901 OVOS2A0A0J9YW53 1432 aa22.81■■□□□ 1.24
DDR1-261ENST00000507901 ATRNO75882 1429 aa22.81■■□□□ 1.24
DDR1-261ENST00000507901 OVOS2Q6IE36 1432 aa22.81■■□□□ 1.24
DDR1-261ENST00000507901 CDK12Q9NYV4 1490 aaPredicted RBP22.8■■□□□ 1.24
DDR1-261ENST00000507901 FAM83GA6ND36 823 aa22.8■■□□□ 1.24
DDR1-261ENST00000507901 GCP02774 474 aa22.79■■□□□ 1.24
DDR1-261ENST00000507901 NLRP6P59044 892 aa22.79■■□□□ 1.24
DDR1-261ENST00000507901 COL18A1P39060 1754 aa22.78■■□□□ 1.24
DDR1-261ENST00000507901 KIAA0232Q92628 1395 aa22.78■■□□□ 1.24
DDR1-261ENST00000507901 NME9Q86XW9 330 aa22.78■■□□□ 1.24
DDR1-261ENST00000507901 CARD14Q9BXL6 1004 aa22.78■■□□□ 1.24
DDR1-261ENST00000507901 TRPC5Q9UL62 973 aaPredicted RBP22.78■■□□□ 1.24
DDR1-261ENST00000507901 KIF7Q2M1P5 1343 aa22.78■■□□□ 1.24
DDR1-261ENST00000507901 KIF20BQ96Q89 1820 aa22.78■■□□□ 1.24
DDR1-261ENST00000507901 PLEKHG5O94827 1062 aa22.77■■□□□ 1.24
DDR1-261ENST00000507901 HAP1P54257 671 aaPredicted RBP22.77■■□□□ 1.24
DDR1-261ENST00000507901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.77■■□□□ 1.24
DDR1-261ENST00000507901 ZRANB1Q9UGI0 708 aa22.77■■□□□ 1.24
DDR1-261ENST00000507901 UNC5CLQ8IV45 518 aa22.74■■□□□ 1.23
DDR1-261ENST00000507901 CAMTA1Q9Y6Y1 1673 aa22.73■■□□□ 1.23
DDR1-261ENST00000507901 NSD3Q9BZ95 1437 aa22.73■■□□□ 1.23
DDR1-261ENST00000507901 GLI3P10071 1580 aa22.72■■□□□ 1.23
DDR1-261ENST00000507901 ZC3H6P61129 1189 aaKnown RBP22.72■■□□□ 1.23
DDR1-261ENST00000507901 ABCC6O95255 1503 aa22.72■■□□□ 1.23
DDR1-261ENST00000507901 FYB1O15117 783 aa22.71■■□□□ 1.23
DDR1-261ENST00000507901 PRDM11Q9NQV5 511 aa22.71■■□□□ 1.23
DDR1-261ENST00000507901 CCDC7Q96M83 1385 aa22.71■■□□□ 1.23
DDR1-261ENST00000507901 ARHGEF25Q86VW2 580 aa22.7■■□□□ 1.22
DDR1-261ENST00000507901 KCNH5Q8NCM2 988 aa22.7■■□□□ 1.22
DDR1-261ENST00000507901 AATKQ6ZMQ8 1374 aa22.7■■□□□ 1.22
DDR1-261ENST00000507901 LTN1O94822 1766 aa22.7■■□□□ 1.22
DDR1-261ENST00000507901 WASHC2AQ641Q2 1341 aa22.69■■□□□ 1.22
DDR1-261ENST00000507901 CHRNA2Q15822 529 aa22.69■■□□□ 1.22
DDR1-261ENST00000507901 BTG4Q9NY30 223 aa22.69■■□□□ 1.22
DDR1-261ENST00000507901 ANKRD26Q9UPS8 1709 aa22.68■■□□□ 1.22
DDR1-261ENST00000507901 RGS12O14924 1447 aa22.68■■□□□ 1.22
DDR1-261ENST00000507901 VPS72Q15906 364 aa22.67■■□□□ 1.22
DDR1-261ENST00000507901 PANK3Q9H999 370 aa22.67■■□□□ 1.22
DDR1-261ENST00000507901 RGPD5Q99666 1765 aa22.67■■□□□ 1.22
DDR1-261ENST00000507901 UPF1Q92900 1129 aaKnown RBP eCLIP22.66■■□□□ 1.22
DDR1-261ENST00000507901 POLR3GLQ9BT43 218 aa22.66■■□□□ 1.22
DDR1-261ENST00000507901 COL5A2P05997 1499 aaPredicted RBP22.66■■□□□ 1.22
DDR1-261ENST00000507901 GJD4Q96KN9 370 aaPredicted RBP22.64■■□□□ 1.21
DDR1-261ENST00000507901 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
DDR1-261ENST00000507901 COG3Q96JB2 828 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms