RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 NEUROD1Q13562 356 aa23.29■■□□□ 1.32
HOXC4-203ENST00000507650 GJD4Q96KN9 370 aaPredicted RBP23.28■■□□□ 1.32
HOXC4-203ENST00000507650 FAM83GA6ND36 823 aa23.27■■□□□ 1.32
HOXC4-203ENST00000507650 NGDNQ8NEJ9 315 aaKnown RBP23.27■■□□□ 1.32
HOXC4-203ENST00000507650 CENPJQ9HC77 1338 aaPredicted RBP23.27■■□□□ 1.32
HOXC4-203ENST00000507650 NBPF8Q3BBV2 869 aa23.26■■□□□ 1.31
HOXC4-203ENST00000507650 ACEP12821 1306 aa23.25■■□□□ 1.31
HOXC4-203ENST00000507650 NRKQ7Z2Y5 1582 aa23.24■■□□□ 1.31
HOXC4-203ENST00000507650 PLEKHG3A1L390 1219 aa23.23■■□□□ 1.31
HOXC4-203ENST00000507650 HAP1P54257 671 aaPredicted RBP23.23■■□□□ 1.31
HOXC4-203ENST00000507650 CCDC61Q9Y6R9 512 aa23.22■■□□□ 1.31
HOXC4-203ENST00000507650 PPIP5K1Q6PFW1 1433 aa23.22■■□□□ 1.31
HOXC4-203ENST00000507650 AKAP12Q02952 1782 aa23.22■■□□□ 1.31
HOXC4-203ENST00000507650 CABP2Q9NPB3 220 aa23.21■■□□□ 1.31
HOXC4-203ENST00000507650 ATAD2Q6PL18 1390 aa23.21■■□□□ 1.31
HOXC4-203ENST00000507650 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
HOXC4-203ENST00000507650 VPS72Q15906 364 aa23.2■■□□□ 1.3
HOXC4-203ENST00000507650 ROCK2O75116 1388 aaKnown RBP23.19■■□□□ 1.3
HOXC4-203ENST00000507650 PIK3C2AO00443 1686 aa23.18■■□□□ 1.3
HOXC4-203ENST00000507650 LMO7Q8WWI1 1683 aa23.18■■□□□ 1.3
HOXC4-203ENST00000507650 NUTM2GQ5VZR2 741 aa23.17■■□□□ 1.3
HOXC4-203ENST00000507650 THSD7AQ9UPZ6 1657 aa23.16■■□□□ 1.3
HOXC4-203ENST00000507650 SRPK2P78362 688 aaKnown RBP23.16■■□□□ 1.3
HOXC4-203ENST00000507650 KIAA0232Q92628 1395 aa23.15■■□□□ 1.3
HOXC4-203ENST00000507650 BTG4Q9NY30 223 aa23.15■■□□□ 1.3
HOXC4-203ENST00000507650 ONECUT3O60422 494 aaPredicted RBP23.14■■□□□ 1.29
HOXC4-203ENST00000507650 SSH2Q76I76 1423 aa23.14■■□□□ 1.29
HOXC4-203ENST00000507650 USP19O94966 1318 aa23.12■■□□□ 1.29
HOXC4-203ENST00000507650 USP6P35125 1406 aa23.12■■□□□ 1.29
HOXC4-203ENST00000507650 SEPT12Q8IYM1 358 aa23.12■■□□□ 1.29
HOXC4-203ENST00000507650 MON2Q7Z3U7 1717 aa23.11■■□□□ 1.29
HOXC4-203ENST00000507650 TRIM26Q12899 539 aaPredicted RBP23.11■■□□□ 1.29
HOXC4-203ENST00000507650 CAMTA1Q9Y6Y1 1673 aa23.11■■□□□ 1.29
HOXC4-203ENST00000507650 CHRNA2Q15822 529 aa23.1■■□□□ 1.29
HOXC4-203ENST00000507650 CABP1Q9NZU7 370 aa23.1■■□□□ 1.29
HOXC4-203ENST00000507650 SLIT3O75094 1523 aa23.09■■□□□ 1.29
HOXC4-203ENST00000507650 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
HOXC4-203ENST00000507650 COL18A1P39060 1754 aa23.09■■□□□ 1.29
HOXC4-203ENST00000507650 ZC3H6P61129 1189 aaKnown RBP23.08■■□□□ 1.29
HOXC4-203ENST00000507650 CCDC9Q9Y3X0 531 aaKnown RBP23.08■■□□□ 1.29
HOXC4-203ENST00000507650 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.28
HOXC4-203ENST00000507650 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.28
HOXC4-203ENST00000507650 EVC2Q86UK5 1308 aa23.07■■□□□ 1.28
HOXC4-203ENST00000507650 ABTB2Q8N961 1025 aa23.06■■□□□ 1.28
HOXC4-203ENST00000507650 RGPD5Q99666 1765 aa23.06■■□□□ 1.28
HOXC4-203ENST00000507650 TONSLQ96HA7 1378 aa23.05■■□□□ 1.28
HOXC4-203ENST00000507650 SBNO2Q9Y2G9 1366 aa23.05■■□□□ 1.28
HOXC4-203ENST00000507650 FAM98CQ17RN3 349 aaKnown RBP23.05■■□□□ 1.28
HOXC4-203ENST00000507650 CPDO75976 1380 aa23.04■■□□□ 1.28
HOXC4-203ENST00000507650 CD163L1Q9NR16 1453 aa23.04■■□□□ 1.28
HOXC4-203ENST00000507650 BRD4O60885 1362 aaPredicted RBP23.03■■□□□ 1.28
HOXC4-203ENST00000507650 TNS1Q9HBL0 1735 aaKnown RBP23.03■■□□□ 1.28
HOXC4-203ENST00000507650 CPSF1Q10570 1443 aaKnown RBP23.03■■□□□ 1.28
HOXC4-203ENST00000507650 USP54Q70EL1 1684 aa23.03■■□□□ 1.28
HOXC4-203ENST00000507650 BLMP54132 1417 aaPredicted RBP23.02■■□□□ 1.28
HOXC4-203ENST00000507650 CARD11Q9BXL7 1154 aa23.01■■□□□ 1.27
HOXC4-203ENST00000507650 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
HOXC4-203ENST00000507650 GCP02774 474 aa23■■□□□ 1.27
HOXC4-203ENST00000507650 WNK3Q9BYP7 1800 aa23■■□□□ 1.27
HOXC4-203ENST00000507650 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
HOXC4-203ENST00000507650 KRT27Q7Z3Y8 459 aa22.99■■□□□ 1.27
HOXC4-203ENST00000507650 COL5A2P05997 1499 aaPredicted RBP22.98■■□□□ 1.27
HOXC4-203ENST00000507650 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
HOXC4-203ENST00000507650 NFAT5O94916 1531 aa22.98■■□□□ 1.27
HOXC4-203ENST00000507650 FAM182BQ5T319 152 aa22.97■■□□□ 1.27
HOXC4-203ENST00000507650 NLRP13Q86W25 1043 aa22.97■■□□□ 1.27
HOXC4-203ENST00000507650 SRCAPQ6ZRS2 3230 aa22.97■■□□□ 1.27
HOXC4-203ENST00000507650 PARP4Q9UKK3 1724 aaKnown RBP22.96■■□□□ 1.27
HOXC4-203ENST00000507650 DEFB132Q7Z7B7 95 aa22.96■■□□□ 1.27
HOXC4-203ENST00000507650 CCDC125Q86Z20 511 aa22.96■■□□□ 1.27
HOXC4-203ENST00000507650 TTC21BQ7Z4L5 1316 aa22.96■■□□□ 1.27
HOXC4-203ENST00000507650 LARP1Q6PKG0 1096 aaKnown RBP22.95■■□□□ 1.26
HOXC4-203ENST00000507650 NLRP6P59044 892 aa22.94■■□□□ 1.26
HOXC4-203ENST00000507650 A0A0G2JS52 829 aa22.93■■□□□ 1.26
HOXC4-203ENST00000507650 MYT1Q01538 1121 aa22.93■■□□□ 1.26
HOXC4-203ENST00000507650 LTN1O94822 1766 aa22.93■■□□□ 1.26
HOXC4-203ENST00000507650 TESK2Q96S53 571 aa22.92■■□□□ 1.26
HOXC4-203ENST00000507650 KTN1Q86UP2 1357 aaKnown RBP22.91■■□□□ 1.26
HOXC4-203ENST00000507650 LRRC37A3O60309 1634 aa22.91■■□□□ 1.26
HOXC4-203ENST00000507650 AATKQ6ZMQ8 1374 aa22.9■■□□□ 1.26
HOXC4-203ENST00000507650 USP35Q9P2H5 1018 aa22.9■■□□□ 1.26
HOXC4-203ENST00000507650 ZRANB1Q9UGI0 708 aa22.9■■□□□ 1.26
HOXC4-203ENST00000507650 PEAK1Q9H792 1746 aa22.89■■□□□ 1.26
HOXC4-203ENST00000507650 ZNF692Q9BU19 519 aaPredicted RBP22.89■■□□□ 1.25
HOXC4-203ENST00000507650 AXIN2Q9Y2T1 843 aa22.88■■□□□ 1.25
HOXC4-203ENST00000507650 SBF2Q86WG5 1849 aa22.87■■□□□ 1.25
HOXC4-203ENST00000507650 TTC21AQ8NDW8 1320 aa22.87■■□□□ 1.25
HOXC4-203ENST00000507650 BARGINQ6ZT62 677 aa22.87■■□□□ 1.25
HOXC4-203ENST00000507650 SLC12A5Q9H2X9 1139 aa22.87■■□□□ 1.25
HOXC4-203ENST00000507650 CRB1P82279 1406 aa22.86■■□□□ 1.25
HOXC4-203ENST00000507650 EVA1CP58658 441 aa22.86■■□□□ 1.25
HOXC4-203ENST00000507650 A0A1W2PP64 1363 aa22.86■■□□□ 1.25
HOXC4-203ENST00000507650 ST20-MTHFSA0A0A6YYL1 179 aa22.85■■□□□ 1.25
HOXC4-203ENST00000507650 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
HOXC4-203ENST00000507650 ARHGEF25Q86VW2 580 aa22.85■■□□□ 1.25
HOXC4-203ENST00000507650 USP31Q70CQ4 1352 aa22.85■■□□□ 1.25
HOXC4-203ENST00000507650 TCP11L2Q8N4U5 519 aa22.84■■□□□ 1.25
HOXC4-203ENST00000507650 ABCC6O95255 1503 aa22.83■■□□□ 1.25
HOXC4-203ENST00000507650 NME9Q86XW9 330 aa22.83■■□□□ 1.25
HOXC4-203ENST00000507650 RREB1Q92766 1687 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms