RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 ALS2Q96Q42 1657 aa20■□□□□ 0.79
CCHCR1-222ENST00000507459 MARF1Q9Y4F3 1742 aaKnown RBP20■□□□□ 0.79
CCHCR1-222ENST00000507459 RBM6P78332 1123 aaKnown RBP20■□□□□ 0.79
CCHCR1-222ENST00000507459 TRPC5Q9UL62 973 aaPredicted RBP20■□□□□ 0.79
CCHCR1-222ENST00000507459 TIMELESSQ9UNS1 1208 aa19.99■□□□□ 0.79
CCHCR1-222ENST00000507459 ST20-MTHFSA0A0A6YYL1 179 aa19.97■□□□□ 0.79
CCHCR1-222ENST00000507459 ABTB2Q8N961 1025 aa19.97■□□□□ 0.79
CCHCR1-222ENST00000507459 BCL9LQ86UU0 1499 aa19.97■□□□□ 0.79
CCHCR1-222ENST00000507459 SBNO2Q9Y2G9 1366 aa19.96■□□□□ 0.79
CCHCR1-222ENST00000507459 ABCA3Q99758 1704 aa19.96■□□□□ 0.79
CCHCR1-222ENST00000507459 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
CCHCR1-222ENST00000507459 UNC5CLQ8IV45 518 aa19.95■□□□□ 0.78
CCHCR1-222ENST00000507459 ATAD2Q6PL18 1390 aa19.95■□□□□ 0.78
CCHCR1-222ENST00000507459 ATRNO75882 1429 aa19.93■□□□□ 0.78
CCHCR1-222ENST00000507459 SLIT2O94813 1529 aa19.93■□□□□ 0.78
CCHCR1-222ENST00000507459 TMC1Q8TDI8 760 aa19.93■□□□□ 0.78
CCHCR1-222ENST00000507459 USP6P35125 1406 aa19.92■□□□□ 0.78
CCHCR1-222ENST00000507459 ZC3H6P61129 1189 aaKnown RBP19.91■□□□□ 0.78
CCHCR1-222ENST00000507459 GJD4Q96KN9 370 aaPredicted RBP19.91■□□□□ 0.78
CCHCR1-222ENST00000507459 TESK2Q96S53 571 aa19.91■□□□□ 0.78
CCHCR1-222ENST00000507459 ZNF692Q9BU19 519 aaPredicted RBP19.91■□□□□ 0.78
CCHCR1-222ENST00000507459 PRDM11Q9NQV5 511 aa19.91■□□□□ 0.78
CCHCR1-222ENST00000507459 CCDC9Q9Y3X0 531 aaKnown RBP19.91■□□□□ 0.78
CCHCR1-222ENST00000507459 USP47Q96K76 1375 aa19.91■□□□□ 0.78
CCHCR1-222ENST00000507459 CDK12Q9NYV4 1490 aaPredicted RBP19.91■□□□□ 0.78
CCHCR1-222ENST00000507459 NLRP13Q86W25 1043 aa19.9■□□□□ 0.78
CCHCR1-222ENST00000507459 BTG4Q9NY30 223 aa19.9■□□□□ 0.78
CCHCR1-222ENST00000507459 RGS12O14924 1447 aa19.9■□□□□ 0.78
CCHCR1-222ENST00000507459 BRD4O60885 1362 aaPredicted RBP19.89■□□□□ 0.77
CCHCR1-222ENST00000507459 NLRP6P59044 892 aa19.89■□□□□ 0.77
CCHCR1-222ENST00000507459 CRYBG1Q9Y4K1 1723 aa19.88■□□□□ 0.77
CCHCR1-222ENST00000507459 CHRNA2Q15822 529 aa19.88■□□□□ 0.77
CCHCR1-222ENST00000507459 SLC12A5Q9H2X9 1139 aa19.88■□□□□ 0.77
CCHCR1-222ENST00000507459 PLCH1Q4KWH8 1693 aa19.87■□□□□ 0.77
CCHCR1-222ENST00000507459 KTN1Q86UP2 1357 aaKnown RBP19.87■□□□□ 0.77
CCHCR1-222ENST00000507459 KIAA0232Q92628 1395 aa19.87■□□□□ 0.77
CCHCR1-222ENST00000507459 TTC21BQ7Z4L5 1316 aa19.87■□□□□ 0.77
CCHCR1-222ENST00000507459 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.86■□□□□ 0.77
CCHCR1-222ENST00000507459 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
CCHCR1-222ENST00000507459 VPS72Q15906 364 aa19.86■□□□□ 0.77
CCHCR1-222ENST00000507459 PHRF1Q9P1Y6 1649 aaKnown RBP19.86■□□□□ 0.77
CCHCR1-222ENST00000507459 SSH2Q76I76 1423 aa19.85■□□□□ 0.77
CCHCR1-222ENST00000507459 GCP02774 474 aa19.85■□□□□ 0.77
CCHCR1-222ENST00000507459 NWD2Q9ULI1 1742 aa19.85■□□□□ 0.77
CCHCR1-222ENST00000507459 CPSF1Q10570 1443 aaKnown RBP19.85■□□□□ 0.77
CCHCR1-222ENST00000507459 USP19O94966 1318 aa19.84■□□□□ 0.77
CCHCR1-222ENST00000507459 ZBTB7CA1YPR0 619 aa19.84■□□□□ 0.77
CCHCR1-222ENST00000507459 TMF1P82094 1093 aa19.84■□□□□ 0.77
CCHCR1-222ENST00000507459 HDGFL2Q7Z4V5 671 aaPredicted RBP19.84■□□□□ 0.77
CCHCR1-222ENST00000507459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCHCR1-222ENST00000507459 PUS7Q96PZ0 661 aaKnown RBP19.84■□□□□ 0.77
CCHCR1-222ENST00000507459 AKAP12Q02952 1782 aa19.84■□□□□ 0.77
CCHCR1-222ENST00000507459 COL14A1Q05707 1796 aaKnown RBP19.84■□□□□ 0.77
CCHCR1-222ENST00000507459 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
CCHCR1-222ENST00000507459 TERF2IPQ9NYB0 399 aa19.82■□□□□ 0.76
CCHCR1-222ENST00000507459 TTC21AQ8NDW8 1320 aa19.81■□□□□ 0.76
CCHCR1-222ENST00000507459 SOX12O15370 315 aa19.81■□□□□ 0.76
CCHCR1-222ENST00000507459 GLI3P10071 1580 aa19.81■□□□□ 0.76
CCHCR1-222ENST00000507459 CD163L1Q9NR16 1453 aa19.8■□□□□ 0.76
CCHCR1-222ENST00000507459 NRKQ7Z2Y5 1582 aa19.8■□□□□ 0.76
CCHCR1-222ENST00000507459 UPF1Q92900 1129 aaKnown RBP eCLIP19.8■□□□□ 0.76
CCHCR1-222ENST00000507459 PIK3C2AO00443 1686 aa19.8■□□□□ 0.76
CCHCR1-222ENST00000507459 A0A0G2JS52 829 aa19.79■□□□□ 0.76
CCHCR1-222ENST00000507459 EVA1CP58658 441 aa19.79■□□□□ 0.76
CCHCR1-222ENST00000507459 MYT1Q01538 1121 aa19.79■□□□□ 0.76
CCHCR1-222ENST00000507459 ZRANB1Q9UGI0 708 aa19.79■□□□□ 0.76
CCHCR1-222ENST00000507459 NRAPQ86VF7 1730 aa19.79■□□□□ 0.76
CCHCR1-222ENST00000507459 SEPT12Q8IYM1 358 aa19.78■□□□□ 0.76
CCHCR1-222ENST00000507459 A0A1W2PP64 1363 aa19.78■□□□□ 0.76
CCHCR1-222ENST00000507459 CPDO75976 1380 aa19.78■□□□□ 0.76
CCHCR1-222ENST00000507459 MON2Q7Z3U7 1717 aa19.77■□□□□ 0.76
CCHCR1-222ENST00000507459 FAM98CQ17RN3 349 aaKnown RBP19.77■□□□□ 0.76
CCHCR1-222ENST00000507459 NME9Q86XW9 330 aa19.77■□□□□ 0.76
CCHCR1-222ENST00000507459 CDCA8Q53HL2 280 aa19.76■□□□□ 0.75
CCHCR1-222ENST00000507459 SPATA31A5Q5VU36 1347 aa19.76■□□□□ 0.75
CCHCR1-222ENST00000507459 SPATA31A7Q8IWB4 1347 aa19.76■□□□□ 0.75
CCHCR1-222ENST00000507459 NINLQ9Y2I6 1382 aa19.75■□□□□ 0.75
CCHCR1-222ENST00000507459 KCNH5Q8NCM2 988 aa19.75■□□□□ 0.75
CCHCR1-222ENST00000507459 SLIT3O75094 1523 aa19.75■□□□□ 0.75
CCHCR1-222ENST00000507459 EIF4G2P78344 907 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCHCR1-222ENST00000507459 USP35Q9P2H5 1018 aa19.74■□□□□ 0.75
CCHCR1-222ENST00000507459 EDC4Q6P2E9 1401 aaKnown RBP19.74■□□□□ 0.75
CCHCR1-222ENST00000507459 CAMTA1Q9Y6Y1 1673 aa19.73■□□□□ 0.75
CCHCR1-222ENST00000507459 ONECUT3O60422 494 aaPredicted RBP19.73■□□□□ 0.75
CCHCR1-222ENST00000507459 HSPA5P11021 654 aaKnown RBP19.72■□□□□ 0.75
CCHCR1-222ENST00000507459 LARP1Q6PKG0 1096 aaKnown RBP19.72■□□□□ 0.75
CCHCR1-222ENST00000507459 POLR3GLQ9BT43 218 aa19.72■□□□□ 0.75
CCHCR1-222ENST00000507459 SPATA31A1Q5TZJ5 1347 aa19.72■□□□□ 0.75
CCHCR1-222ENST00000507459 AATKQ6ZMQ8 1374 aa19.7■□□□□ 0.74
CCHCR1-222ENST00000507459 USP31Q70CQ4 1352 aa19.7■□□□□ 0.74
CCHCR1-222ENST00000507459 ARHGEF25Q86VW2 580 aa19.7■□□□□ 0.74
CCHCR1-222ENST00000507459 ANKRD36BQ8N2N9 1353 aa19.7■□□□□ 0.74
CCHCR1-222ENST00000507459 LMO7Q8WWI1 1683 aa19.69■□□□□ 0.74
CCHCR1-222ENST00000507459 KRT27Q7Z3Y8 459 aa19.69■□□□□ 0.74
CCHCR1-222ENST00000507459 AXIN2Q9Y2T1 843 aa19.69■□□□□ 0.74
CCHCR1-222ENST00000507459 BRWD3Q6RI45 1802 aa19.69■□□□□ 0.74
CCHCR1-222ENST00000507459 COL5A2P05997 1499 aaPredicted RBP19.67■□□□□ 0.74
CCHCR1-222ENST00000507459 TOM1L2Q6ZVM7 507 aa19.65■□□□□ 0.74
CCHCR1-222ENST00000507459 TCP11L2Q8N4U5 519 aa19.65■□□□□ 0.74
CCHCR1-222ENST00000507459 COG3Q96JB2 828 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms