RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 SAFB2Q14151 953 aaKnown RBP eCLIP8.64□□□□□ -1.03
GYPB-208ENST00000507009 SEPT12Q8IYM1 358 aa8.64□□□□□ -1.03
GYPB-208ENST00000507009 USP32Q8NFA0 1604 aa8.64□□□□□ -1.03
GYPB-208ENST00000507009 RRBP1Q9P2E9 1410 aaKnown RBP8.63□□□□□ -1.03
GYPB-208ENST00000507009 IFT172Q9UG01 1749 aa8.63□□□□□ -1.03
GYPB-208ENST00000507009 KIF1AQ12756 1690 aa8.63□□□□□ -1.03
GYPB-208ENST00000507009 PLCH1Q4KWH8 1693 aa8.63□□□□□ -1.03
GYPB-208ENST00000507009 SPATA31A3Q5VYP0 1347 aa8.63□□□□□ -1.03
GYPB-208ENST00000507009 CD44P16070 742 aaKnown RBP8.63□□□□□ -1.03
GYPB-208ENST00000507009 CCDC144AA2RUR9 1427 aa8.63□□□□□ -1.03
GYPB-208ENST00000507009 PRAG1Q86YV5 1406 aa8.63□□□□□ -1.03
GYPB-208ENST00000507009 SLIT2O94813 1529 aa8.62□□□□□ -1.03
GYPB-208ENST00000507009 KNDC1Q76NI1 1749 aa8.61□□□□□ -1.03
GYPB-208ENST00000507009 PSME1Q06323 249 aa8.61□□□□□ -1.03
GYPB-208ENST00000507009 KRT27Q7Z3Y8 459 aa8.61□□□□□ -1.03
GYPB-208ENST00000507009 PMFBP1Q8TBY8 1022 aa8.61□□□□□ -1.03
GYPB-208ENST00000507009 CREBZFQ9NS37 354 aa8.61□□□□□ -1.03
GYPB-208ENST00000507009 PHF8Q9UPP1 1060 aa8.61□□□□□ -1.03
GYPB-208ENST00000507009 TNS3Q68CZ2 1445 aa8.61□□□□□ -1.03
GYPB-208ENST00000507009 ABCA3Q99758 1704 aa8.6□□□□□ -1.03
GYPB-208ENST00000507009 VPS72Q15906 364 aa8.6□□□□□ -1.03
GYPB-208ENST00000507009 FAM98CQ17RN3 349 aaKnown RBP8.6□□□□□ -1.03
GYPB-208ENST00000507009 FAM182BQ5T319 152 aa8.6□□□□□ -1.03
GYPB-208ENST00000507009 YTHDC2Q9H6S0 1430 aaKnown RBP8.6□□□□□ -1.03
GYPB-208ENST00000507009 BAG6P46379 1132 aa8.59□□□□□ -1.03
GYPB-208ENST00000507009 NWD2Q9ULI1 1742 aa8.59□□□□□ -1.03
GYPB-208ENST00000507009 ABCC11Q96J66 1382 aa8.59□□□□□ -1.03
GYPB-208ENST00000507009 ANKRD30BQ9BXX2 1392 aa8.59□□□□□ -1.03
GYPB-208ENST00000507009 TECPR2O15040 1411 aa8.58□□□□□ -1.04
GYPB-208ENST00000507009 FAM83GA6ND36 823 aa8.58□□□□□ -1.04
GYPB-208ENST00000507009 CFAP70Q5T0N1 1121 aa8.58□□□□□ -1.04
GYPB-208ENST00000507009 PRAM1Q96QH2 718 aa8.58□□□□□ -1.04
GYPB-208ENST00000507009 POGKQ9P215 609 aa8.58□□□□□ -1.04
GYPB-208ENST00000507009 PAK3O75914 559 aaPredicted RBP8.57□□□□□ -1.04
GYPB-208ENST00000507009 EN1Q05925 392 aaPredicted RBP8.57□□□□□ -1.04
GYPB-208ENST00000507009 R3HDM1Q15032 1099 aaKnown RBP8.57□□□□□ -1.04
GYPB-208ENST00000507009 MPHOSPH9Q99550 1183 aa8.57□□□□□ -1.04
GYPB-208ENST00000507009 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
GYPB-208ENST00000507009 BTG4Q9NY30 223 aa8.57□□□□□ -1.04
GYPB-208ENST00000507009 ARHGEF10O15013 1369 aa8.57□□□□□ -1.04
GYPB-208ENST00000507009 LRP5O75197 1615 aa8.57□□□□□ -1.04
GYPB-208ENST00000507009 DHX57Q6P158 1386 aaKnown RBP8.57□□□□□ -1.04
GYPB-208ENST00000507009 PIK3C2GO75747 1445 aa8.56□□□□□ -1.04
GYPB-208ENST00000507009 SPATA31E1Q6ZUB1 1445 aa8.56□□□□□ -1.04
GYPB-208ENST00000507009 HRCP23327 699 aa8.56□□□□□ -1.04
GYPB-208ENST00000507009 NRXN1Q9ULB1 1477 aa8.56□□□□□ -1.04
GYPB-208ENST00000507009 MINK1Q8N4C8 1332 aaPredicted RBP8.55□□□□□ -1.04
GYPB-208ENST00000507009 RGPD1P0DJD0 1748 aa8.55□□□□□ -1.04
GYPB-208ENST00000507009 NRAPQ86VF7 1730 aa8.55□□□□□ -1.04
GYPB-208ENST00000507009 SBNO1A3KN83 1393 aa8.55□□□□□ -1.04
GYPB-208ENST00000507009 COL14A1Q05707 1796 aaKnown RBP8.54□□□□□ -1.04
GYPB-208ENST00000507009 GPRASP1Q5JY77 1395 aa8.54□□□□□ -1.04
GYPB-208ENST00000507009 C14orf93Q9H972 538 aaKnown RBP8.54□□□□□ -1.04
GYPB-208ENST00000507009 STRN4Q9NRL3 753 aa8.54□□□□□ -1.04
GYPB-208ENST00000507009 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
GYPB-208ENST00000507009 ONECUT3O60422 494 aaPredicted RBP8.53□□□□□ -1.04
GYPB-208ENST00000507009 EZH2Q15910 746 aaKnown RBP8.53□□□□□ -1.04
GYPB-208ENST00000507009 NGDNQ8NEJ9 315 aaKnown RBP8.53□□□□□ -1.04
GYPB-208ENST00000507009 USP35Q9P2H5 1018 aa8.53□□□□□ -1.04
GYPB-208ENST00000507009 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
GYPB-208ENST00000507009 TRPM3Q9HCF6 1732 aaPredicted RBP8.53□□□□□ -1.04
GYPB-208ENST00000507009 TNS1Q9HBL0 1735 aaKnown RBP8.52□□□□□ -1.05
GYPB-208ENST00000507009 TRIM37O94972 964 aa8.52□□□□□ -1.05
GYPB-208ENST00000507009 CHRNA2Q15822 529 aa8.52□□□□□ -1.05
GYPB-208ENST00000507009 NUTM2GQ5VZR2 741 aa8.52□□□□□ -1.05
GYPB-208ENST00000507009 PRDM11Q9NQV5 511 aa8.52□□□□□ -1.05
GYPB-208ENST00000507009 ALS2Q96Q42 1657 aa8.52□□□□□ -1.05
GYPB-208ENST00000507009 ADGRB2O60241 1585 aa8.52□□□□□ -1.05
GYPB-208ENST00000507009 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.05
GYPB-208ENST00000507009 APBA3O96018 575 aa8.51□□□□□ -1.05
GYPB-208ENST00000507009 ZC3H6P61129 1189 aaKnown RBP8.51□□□□□ -1.05
GYPB-208ENST00000507009 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
GYPB-208ENST00000507009 ANKARQ7Z5J8 1434 aa8.51□□□□□ -1.05
GYPB-208ENST00000507009 SPATA31A5Q5VU36 1347 aa8.51□□□□□ -1.05
GYPB-208ENST00000507009 SPATA31A7Q8IWB4 1347 aa8.51□□□□□ -1.05
GYPB-208ENST00000507009 PRR36Q9H6K5 1346 aa8.51□□□□□ -1.05
GYPB-208ENST00000507009 KIAA0232Q92628 1395 aa8.49□□□□□ -1.05
GYPB-208ENST00000507009 ZBTB7CA1YPR0 619 aa8.49□□□□□ -1.05
GYPB-208ENST00000507009 EVA1CP58658 441 aa8.49□□□□□ -1.05
GYPB-208ENST00000507009 THSD7AQ9UPZ6 1657 aa8.49□□□□□ -1.05
GYPB-208ENST00000507009 TULP4Q9NRJ4 1543 aa8.49□□□□□ -1.05
GYPB-208ENST00000507009 CRYBG1Q9Y4K1 1723 aa8.49□□□□□ -1.05
GYPB-208ENST00000507009 PHRF1Q9P1Y6 1649 aaKnown RBP8.48□□□□□ -1.05
GYPB-208ENST00000507009 WASLO00401 505 aaPredicted RBP8.48□□□□□ -1.05
GYPB-208ENST00000507009 PDE3BQ13370 1112 aa8.48□□□□□ -1.05
GYPB-208ENST00000507009 DCAF11Q8TEB1 546 aa8.48□□□□□ -1.05
GYPB-208ENST00000507009 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
GYPB-208ENST00000507009 DLC1Q96QB1 1528 aa8.48□□□□□ -1.05
GYPB-208ENST00000507009 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
GYPB-208ENST00000507009 YY1P25490 414 aa8.47□□□□□ -1.05
GYPB-208ENST00000507009 CLCN6P51797 869 aa8.47□□□□□ -1.05
GYPB-208ENST00000507009 FAM196AQ6ZSG2 479 aa8.47□□□□□ -1.05
GYPB-208ENST00000507009 PROM2Q8N271 834 aa8.47□□□□□ -1.05
GYPB-208ENST00000507009 ZNF579Q8NAF0 562 aaKnown RBP8.47□□□□□ -1.05
GYPB-208ENST00000507009 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
GYPB-208ENST00000507009 ITSN1Q15811 1721 aa8.46□□□□□ -1.05
GYPB-208ENST00000507009 NUDT16Q96DE0 195 aaKnown RBP8.46□□□□□ -1.06
GYPB-208ENST00000507009 CAMKK2Q96RR4 588 aa8.46□□□□□ -1.06
GYPB-208ENST00000507009 ADGRB1O14514 1584 aa8.46□□□□□ -1.06
GYPB-208ENST00000507009 POTEIP0CG38 1075 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms