RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 TRIM67Q6ZTA4 783 aa7.58□□□□□ -1.2
CDC42SE2-210ENST00000506929 MTMR14Q8NCE2 650 aa7.58□□□□□ -1.2
CDC42SE2-210ENST00000506929 TRIM34Q9BYJ4 488 aa7.58□□□□□ -1.2
CDC42SE2-210ENST00000506929 SKOR1P84550 965 aa7.57□□□□□ -1.2
CDC42SE2-210ENST00000506929 TMEM259Q4ZIN3 620 aa7.57□□□□□ -1.2
CDC42SE2-210ENST00000506929 GJD4Q96KN9 370 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE2-210ENST00000506929 UNC93B1Q9H1C4 597 aa7.57□□□□□ -1.2
CDC42SE2-210ENST00000506929 GDF9O60383 454 aa7.56□□□□□ -1.2
CDC42SE2-210ENST00000506929 Q6ZNB5 142 aa7.56□□□□□ -1.2
CDC42SE2-210ENST00000506929 BAP1Q92560 729 aa7.56□□□□□ -1.2
CDC42SE2-210ENST00000506929 FOXC1Q12948 553 aa7.55□□□□□ -1.2
CDC42SE2-210ENST00000506929 PKD2L1Q9P0L9 805 aa7.55□□□□□ -1.2
CDC42SE2-210ENST00000506929 TNFRSF10AO00220 468 aa7.54□□□□□ -1.2
CDC42SE2-210ENST00000506929 GPR37L1O60883 481 aa7.54□□□□□ -1.2
CDC42SE2-210ENST00000506929 WNT7BP56706 349 aa7.54□□□□□ -1.2
CDC42SE2-210ENST00000506929 WNT7AO00755 349 aa7.53□□□□□ -1.2
CDC42SE2-210ENST00000506929 SH3BP2P78314 561 aa7.53□□□□□ -1.2
CDC42SE2-210ENST00000506929 MCM6Q14566 821 aa7.53□□□□□ -1.2
CDC42SE2-210ENST00000506929 BANK1Q8NDB2 785 aa7.53□□□□□ -1.2
CDC42SE2-210ENST00000506929 FOXJ1Q92949 421 aa7.53□□□□□ -1.2
CDC42SE2-210ENST00000506929 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
CDC42SE2-210ENST00000506929 C4orf48Q5BLP8 95 aa7.51□□□□□ -1.21
CDC42SE2-210ENST00000506929 TRAF7Q6Q0C0 670 aa7.51□□□□□ -1.21
CDC42SE2-210ENST00000506929 OCSTAMPQ9BR26 566 aa7.51□□□□□ -1.21
CDC42SE2-210ENST00000506929 TBC1D2BQ9UPU7 963 aa7.51□□□□□ -1.21
CDC42SE2-210ENST00000506929 DGAT1O75907 488 aa7.5□□□□□ -1.21
CDC42SE2-210ENST00000506929 CYP4X1Q8N118 509 aa7.5□□□□□ -1.21
CDC42SE2-210ENST00000506929 PKDCCQ504Y2 493 aa7.49□□□□□ -1.21
CDC42SE2-210ENST00000506929 RC3H1Q5TC82 1133 aaKnown RBP7.49□□□□□ -1.21
CDC42SE2-210ENST00000506929 ZNF511Q8NB15 262 aa7.49□□□□□ -1.21
CDC42SE2-210ENST00000506929 TOR4AQ9NXH8 423 aa7.49□□□□□ -1.21
CDC42SE2-210ENST00000506929 FKBPLQ9UIM3 349 aa7.49□□□□□ -1.21
CDC42SE2-210ENST00000506929 GTF3C3Q9Y5Q9 886 aa7.49□□□□□ -1.21
CDC42SE2-210ENST00000506929 FAM187AA6NFU0 413 aa7.48□□□□□ -1.21
CDC42SE2-210ENST00000506929 MRGPRX2Q96LB1 330 aa7.48□□□□□ -1.21
CDC42SE2-210ENST00000506929 GDPD2Q9HCC8 539 aa7.48□□□□□ -1.21
CDC42SE2-210ENST00000506929 TTC24A2A3L6 582 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE2-210ENST00000506929 SNIP1Q8TAD8 396 aaKnown RBP7.47□□□□□ -1.21
CDC42SE2-210ENST00000506929 CLUAP1Q96AJ1 413 aa7.47□□□□□ -1.21
CDC42SE2-210ENST00000506929 LCE2BO14633 110 aa7.46□□□□□ -1.22
CDC42SE2-210ENST00000506929 IRF5Q13568 498 aa7.46□□□□□ -1.22
CDC42SE2-210ENST00000506929 SH3BP5LQ7L8J4 393 aa7.46□□□□□ -1.22
CDC42SE2-210ENST00000506929 COG6Q9Y2V7 657 aa7.46□□□□□ -1.22
CDC42SE2-210ENST00000506929 EHBP1Q8NDI1 1231 aa7.45□□□□□ -1.22
CDC42SE2-210ENST00000506929 CARD14Q9BXL6 1004 aa7.45□□□□□ -1.22
CDC42SE2-210ENST00000506929 MAGEB6P1A0A0J9YX57 407 aa7.44□□□□□ -1.22
CDC42SE2-210ENST00000506929 ABL2P42684 1182 aa7.44□□□□□ -1.22
CDC42SE2-210ENST00000506929 MYT1Q01538 1121 aa7.44□□□□□ -1.22
CDC42SE2-210ENST00000506929 TLL2Q9Y6L7 1015 aa7.44□□□□□ -1.22
CDC42SE2-210ENST00000506929 SIAH2O43255 324 aa7.43□□□□□ -1.22
CDC42SE2-210ENST00000506929 FBXO45P0C2W1 286 aa7.43□□□□□ -1.22
CDC42SE2-210ENST00000506929 AGERQ15109 404 aa7.43□□□□□ -1.22
CDC42SE2-210ENST00000506929 SH3RF1Q7Z6J0 888 aa7.43□□□□□ -1.22
CDC42SE2-210ENST00000506929 ARMC2Q8NEN0 867 aa7.43□□□□□ -1.22
CDC42SE2-210ENST00000506929 NDUFB9Q9Y6M9 179 aa7.43□□□□□ -1.22
CDC42SE2-210ENST00000506929 J3QL48 77 aa7.42□□□□□ -1.22
CDC42SE2-210ENST00000506929 SMPD1P17405 629 aa7.42□□□□□ -1.22
CDC42SE2-210ENST00000506929 AVPP01185 164 aa7.41□□□□□ -1.22
CDC42SE2-210ENST00000506929 VARSP26640 1264 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-210ENST00000506929 NBPF14Q5TI25 921 aa7.41□□□□□ -1.22
CDC42SE2-210ENST00000506929 PDXDC2PQ6P474 469 aa7.41□□□□□ -1.22
CDC42SE2-210ENST00000506929 ARHGAP9Q9BRR9 750 aa7.41□□□□□ -1.22
CDC42SE2-210ENST00000506929 ALDH1A1P00352 501 aa7.4□□□□□ -1.22
CDC42SE2-210ENST00000506929 UBTFP17480 764 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-210ENST00000506929 VAC14Q08AM6 782 aa7.4□□□□□ -1.22
CDC42SE2-210ENST00000506929 FLIIQ13045 1269 aa7.4□□□□□ -1.22
CDC42SE2-210ENST00000506929 ERFEQ4G0M1 354 aa7.4□□□□□ -1.22
CDC42SE2-210ENST00000506929 CRIPAKQ8N1N5 446 aa7.4□□□□□ -1.22
CDC42SE2-210ENST00000506929 ADAM32Q8TC27 787 aa7.4□□□□□ -1.22
CDC42SE2-210ENST00000506929 SOCS7O14512 581 aa7.39□□□□□ -1.23
CDC42SE2-210ENST00000506929 ARID5BQ14865 1188 aa7.39□□□□□ -1.23
CDC42SE2-210ENST00000506929 CTC1Q2NKJ3 1217 aa7.39□□□□□ -1.23
CDC42SE2-210ENST00000506929 BPHLQ86WA6 291 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE2-210ENST00000506929 FAM174AQ8TBP5 190 aa7.39□□□□□ -1.23
CDC42SE2-210ENST00000506929 C1QTNF2Q9BXJ5 285 aa7.39□□□□□ -1.23
CDC42SE2-210ENST00000506929 POM121CA8CG34 1229 aa7.38□□□□□ -1.23
CDC42SE2-210ENST00000506929 ZBBXA8MT70 800 aa7.38□□□□□ -1.23
CDC42SE2-210ENST00000506929 SMCPP49901 116 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-210ENST00000506929 MPNDQ8N594 471 aa7.38□□□□□ -1.23
CDC42SE2-210ENST00000506929 GPKOWQ92917 476 aaPredicted RBP eCLIP7.38□□□□□ -1.23
CDC42SE2-210ENST00000506929 ZC3H4Q9UPT8 1303 aaKnown RBP7.37□□□□□ -1.23
CDC42SE2-210ENST00000506929 AXIN1O15169 862 aa7.37□□□□□ -1.23
CDC42SE2-210ENST00000506929 ST8SIA5O15466 376 aa7.37□□□□□ -1.23
CDC42SE2-210ENST00000506929 PTK2Q05397 1052 aa7.37□□□□□ -1.23
CDC42SE2-210ENST00000506929 AAASQ9NRG9 546 aa7.37□□□□□ -1.23
CDC42SE2-210ENST00000506929 WASF2Q9Y6W5 498 aa7.37□□□□□ -1.23
CDC42SE2-210ENST00000506929 GRM5P41594 1212 aa7.36□□□□□ -1.23
CDC42SE2-210ENST00000506929 ZBTB33Q86T24 672 aa7.36□□□□□ -1.23
CDC42SE2-210ENST00000506929 NR3C2P08235 984 aa7.35□□□□□ -1.23
CDC42SE2-210ENST00000506929 NR1H3Q13133 447 aa7.35□□□□□ -1.23
CDC42SE2-210ENST00000506929 FNBP4Q8N3X1 1017 aaPredicted RBP7.35□□□□□ -1.23
CDC42SE2-210ENST00000506929 PNMA1Q8ND90 353 aa7.35□□□□□ -1.23
CDC42SE2-210ENST00000506929 HPS1Q92902 700 aa7.35□□□□□ -1.23
CDC42SE2-210ENST00000506929 PCDHB9Q9Y5E1 797 aa7.35□□□□□ -1.23
CDC42SE2-210ENST00000506929 ADAMTS19Q8TE59 1207 aa7.34□□□□□ -1.23
CDC42SE2-210ENST00000506929 CDK15Q96Q40 435 aa7.34□□□□□ -1.23
CDC42SE2-210ENST00000506929 GPSM3Q9Y4H4 160 aa7.34□□□□□ -1.23
CDC42SE2-210ENST00000506929 RAB15P59190 212 aa7.33□□□□□ -1.24
CDC42SE2-210ENST00000506929 ZNF787Q6DD87 383 aa7.33□□□□□ -1.24
CDC42SE2-210ENST00000506929 TRMT44Q8IYL2 757 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms