RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 DIXDC1Q155Q3 683 aa8.59□□□□□ -1.03
CLOCK-205ENST00000506747 TRIM46Q7Z4K8 759 aa8.59□□□□□ -1.03
CLOCK-205ENST00000506747 RETREG3Q86VR2 466 aa8.59□□□□□ -1.03
CLOCK-205ENST00000506747 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
CLOCK-205ENST00000506747 MOXD2PA6NHM9 499 aa8.58□□□□□ -1.04
CLOCK-205ENST00000506747 NDUFV2P19404 249 aa8.58□□□□□ -1.04
CLOCK-205ENST00000506747 TBC1D2Q9BYX2 928 aa8.58□□□□□ -1.04
CLOCK-205ENST00000506747 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
CLOCK-205ENST00000506747 SIAH2O43255 324 aa8.57□□□□□ -1.04
CLOCK-205ENST00000506747 BMP1P13497 986 aa8.57□□□□□ -1.04
CLOCK-205ENST00000506747 JUNDP17535 347 aa8.57□□□□□ -1.04
CLOCK-205ENST00000506747 VEGFBP49765 207 aa8.57□□□□□ -1.04
CLOCK-205ENST00000506747 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
CLOCK-205ENST00000506747 XP32Q5T750 250 aa8.56□□□□□ -1.04
CLOCK-205ENST00000506747 ERBB4Q15303 1308 aa8.56□□□□□ -1.04
CLOCK-205ENST00000506747 WASF2Q9Y6W5 498 aa8.55□□□□□ -1.04
CLOCK-205ENST00000506747 GJA5P36382 358 aa8.54□□□□□ -1.04
CLOCK-205ENST00000506747 MTMR2Q13614 643 aa8.54□□□□□ -1.04
CLOCK-205ENST00000506747 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
CLOCK-205ENST00000506747 EHBP1Q8NDI1 1231 aa8.54□□□□□ -1.04
CLOCK-205ENST00000506747 SPDYE5A6NIY4 337 aa8.53□□□□□ -1.04
CLOCK-205ENST00000506747 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
CLOCK-205ENST00000506747 SH3D19Q5HYK7 790 aa8.52□□□□□ -1.05
CLOCK-205ENST00000506747 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
CLOCK-205ENST00000506747 NUDT12Q9BQG2 462 aa8.52□□□□□ -1.05
CLOCK-205ENST00000506747 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.05
CLOCK-205ENST00000506747 SPTLC1O15269 473 aa8.51□□□□□ -1.05
CLOCK-205ENST00000506747 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
CLOCK-205ENST00000506747 PRR7Q8TB68 274 aa8.51□□□□□ -1.05
CLOCK-205ENST00000506747 ZBTB3Q9H5J0 574 aa8.5□□□□□ -1.05
CLOCK-205ENST00000506747 CSPP1Q1MSJ5 1256 aa8.49□□□□□ -1.05
CLOCK-205ENST00000506747 PTCRAQ6ISU1 281 aaPredicted RBP8.49□□□□□ -1.05
CLOCK-205ENST00000506747 PCDHB15Q9Y5E8 787 aa8.49□□□□□ -1.05
CLOCK-205ENST00000506747 CCNYL3P0C7X3 344 aa8.48□□□□□ -1.05
CLOCK-205ENST00000506747 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
CLOCK-205ENST00000506747 PTPRNQ16849 979 aa8.48□□□□□ -1.05
CLOCK-205ENST00000506747 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
CLOCK-205ENST00000506747 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLOCK-205ENST00000506747 VSIG8P0DPA2 414 aa8.47□□□□□ -1.05
CLOCK-205ENST00000506747 KCNMA1Q12791 1236 aa8.47□□□□□ -1.05
CLOCK-205ENST00000506747 PRPF38BQ5VTL8 546 aaKnown RBP8.47□□□□□ -1.05
CLOCK-205ENST00000506747 DESI1Q6ICB0 168 aa8.47□□□□□ -1.05
CLOCK-205ENST00000506747 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
CLOCK-205ENST00000506747 HRCP23327 699 aa8.46□□□□□ -1.06
CLOCK-205ENST00000506747 GSK3AP49840 483 aa8.46□□□□□ -1.06
CLOCK-205ENST00000506747 SH3BP2P78314 561 aa8.46□□□□□ -1.06
CLOCK-205ENST00000506747 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
CLOCK-205ENST00000506747 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
CLOCK-205ENST00000506747 SCARF1Q14162 830 aa8.45□□□□□ -1.06
CLOCK-205ENST00000506747 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
CLOCK-205ENST00000506747 FBXO31Q5XUX0 539 aaPredicted RBP8.45□□□□□ -1.06
CLOCK-205ENST00000506747 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
CLOCK-205ENST00000506747 CABLES1Q8TDN4 633 aa8.45□□□□□ -1.06
CLOCK-205ENST00000506747 LIMD1Q9UGP4 676 aa8.45□□□□□ -1.06
CLOCK-205ENST00000506747 CFAP99D6REC4 459 aa8.44□□□□□ -1.06
CLOCK-205ENST00000506747 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
CLOCK-205ENST00000506747 C14orf37Q86TY3 774 aa8.44□□□□□ -1.06
CLOCK-205ENST00000506747 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
CLOCK-205ENST00000506747 CLK2P49760 499 aaKnown RBP8.43□□□□□ -1.06
CLOCK-205ENST00000506747 TUSC1Q2TAM9 212 aa8.43□□□□□ -1.06
CLOCK-205ENST00000506747 PROCA1Q8NCQ7 364 aaPredicted RBP8.43□□□□□ -1.06
CLOCK-205ENST00000506747 TSC1Q92574 1164 aa8.43□□□□□ -1.06
CLOCK-205ENST00000506747 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.42□□□□□ -1.06
CLOCK-205ENST00000506747 CTHP32929 405 aa8.42□□□□□ -1.06
CLOCK-205ENST00000506747 KCNH2Q12809 1159 aa8.42□□□□□ -1.06
CLOCK-205ENST00000506747 TMEM151AQ8N4L1 468 aa8.42□□□□□ -1.06
CLOCK-205ENST00000506747 MPNDQ8N594 471 aa8.42□□□□□ -1.06
CLOCK-205ENST00000506747 UNC93B1Q9H1C4 597 aa8.42□□□□□ -1.06
CLOCK-205ENST00000506747 POLR3EQ9NVU0 708 aa8.42□□□□□ -1.06
CLOCK-205ENST00000506747 NNTQ13423 1086 aa8.41□□□□□ -1.06
CLOCK-205ENST00000506747 QPCTQ16769 361 aa8.41□□□□□ -1.06
CLOCK-205ENST00000506747 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
CLOCK-205ENST00000506747 PCMTD1Q96MG8 357 aaPredicted RBP8.41□□□□□ -1.06
CLOCK-205ENST00000506747 PURBQ96QR8 312 aaKnown RBP8.41□□□□□ -1.06
CLOCK-205ENST00000506747 ATP1B4Q9UN42 357 aaPredicted RBP8.41□□□□□ -1.06
CLOCK-205ENST00000506747 LILRB3O75022 631 aa8.4□□□□□ -1.06
CLOCK-205ENST00000506747 TLL2Q9Y6L7 1015 aa8.4□□□□□ -1.06
CLOCK-205ENST00000506747 GDF11O95390 407 aa8.39□□□□□ -1.07
CLOCK-205ENST00000506747 TIMP2P16035 220 aa8.39□□□□□ -1.07
CLOCK-205ENST00000506747 VARSP26640 1264 aaKnown RBP8.39□□□□□ -1.07
CLOCK-205ENST00000506747 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
CLOCK-205ENST00000506747 SOBPA7XYQ1 873 aa8.38□□□□□ -1.07
CLOCK-205ENST00000506747 ADH1CP00326 375 aa8.38□□□□□ -1.07
CLOCK-205ENST00000506747 LINC01559Q495D7 138 aa8.38□□□□□ -1.07
CLOCK-205ENST00000506747 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
CLOCK-205ENST00000506747 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
CLOCK-205ENST00000506747 BAP1Q92560 729 aa8.38□□□□□ -1.07
CLOCK-205ENST00000506747 WDR4P57081 412 aaKnown RBP8.37□□□□□ -1.07
CLOCK-205ENST00000506747 KRTAP9-6A0A140TA67 174 aa8.36□□□□□ -1.07
CLOCK-205ENST00000506747 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
CLOCK-205ENST00000506747 ZNF511Q8NB15 262 aa8.36□□□□□ -1.07
CLOCK-205ENST00000506747 KLF16Q9BXK1 252 aaPredicted RBP8.36□□□□□ -1.07
CLOCK-205ENST00000506747 MAP10Q9P2G4 905 aa8.36□□□□□ -1.07
CLOCK-205ENST00000506747 RASSF7Q02833 373 aa8.35□□□□□ -1.07
CLOCK-205ENST00000506747 ZMYND15Q9H091 742 aa8.35□□□□□ -1.07
CLOCK-205ENST00000506747 PER1O15534 1290 aaPredicted RBP8.34□□□□□ -1.07
CLOCK-205ENST00000506747 MAN1A2O60476 641 aa8.34□□□□□ -1.07
CLOCK-205ENST00000506747 PPFIA3O75145 1194 aa8.34□□□□□ -1.07
CLOCK-205ENST00000506747 F12P00748 615 aaPredicted RBP8.34□□□□□ -1.07
CLOCK-205ENST00000506747 FLIIQ13045 1269 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms