RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 ESCO1Q5FWF5 840 aa23.98■■□□□ 1.43
ITGA3-207ENST00000506401 NME9Q86XW9 330 aa23.97■■□□□ 1.43
ITGA3-207ENST00000506401 NRKQ7Z2Y5 1582 aa23.97■■□□□ 1.43
ITGA3-207ENST00000506401 MSH6P52701 1360 aa23.96■■□□□ 1.43
ITGA3-207ENST00000506401 TTC21AQ8NDW8 1320 aa23.96■■□□□ 1.43
ITGA3-207ENST00000506401 COG3Q96JB2 828 aa23.96■■□□□ 1.43
ITGA3-207ENST00000506401 CADPS2Q86UW7 1296 aa23.95■■□□□ 1.42
ITGA3-207ENST00000506401 LRRC7Q96NW7 1537 aa23.95■■□□□ 1.42
ITGA3-207ENST00000506401 XIRP1Q702N8 1843 aaKnown RBP23.95■■□□□ 1.42
ITGA3-207ENST00000506401 SSH2Q76I76 1423 aa23.94■■□□□ 1.42
ITGA3-207ENST00000506401 MTHFSP49914 203 aa23.93■■□□□ 1.42
ITGA3-207ENST00000506401 HNRNPUQ00839 825 aaKnown RBP eCLIP23.93■■□□□ 1.42
ITGA3-207ENST00000506401 CFAP53Q96M91 514 aa23.92■■□□□ 1.42
ITGA3-207ENST00000506401 C1orf167Q5SNV9 1468 aa23.92■■□□□ 1.42
ITGA3-207ENST00000506401 SCAF1Q9H7N4 1312 aaKnown RBP23.92■■□□□ 1.42
ITGA3-207ENST00000506401 WDR43Q15061 677 aaKnown RBP eCLIP23.91■■□□□ 1.42
ITGA3-207ENST00000506401 ORAI2Q96SN7 254 aa23.91■■□□□ 1.42
ITGA3-207ENST00000506401 PSME1Q06323 249 aa23.9■■□□□ 1.42
ITGA3-207ENST00000506401 ZRANB1Q9UGI0 708 aa23.9■■□□□ 1.42
ITGA3-207ENST00000506401 MST1RQ04912 1400 aa23.88■■□□□ 1.41
ITGA3-207ENST00000506401 KIF1AQ12756 1690 aa23.88■■□□□ 1.41
ITGA3-207ENST00000506401 MAP2P11137 1827 aaKnown RBP23.87■■□□□ 1.41
ITGA3-207ENST00000506401 INSRP06213 1382 aa23.86■■□□□ 1.41
ITGA3-207ENST00000506401 PAK3O75914 559 aaPredicted RBP23.86■■□□□ 1.41
ITGA3-207ENST00000506401 AATKQ6ZMQ8 1374 aa23.85■■□□□ 1.41
ITGA3-207ENST00000506401 FOXO3O43524 673 aa23.84■■□□□ 1.41
ITGA3-207ENST00000506401 OVOS2A0A0J9YW53 1432 aa23.84■■□□□ 1.41
ITGA3-207ENST00000506401 OVOS2Q6IE36 1432 aa23.84■■□□□ 1.41
ITGA3-207ENST00000506401 ADAMTS8Q9UP79 889 aa23.84■■□□□ 1.41
ITGA3-207ENST00000506401 USP31Q70CQ4 1352 aa23.83■■□□□ 1.41
ITGA3-207ENST00000506401 ABTB2Q8N961 1025 aa23.82■■□□□ 1.4
ITGA3-207ENST00000506401 POLKQ9UBT6 870 aa23.82■■□□□ 1.4
ITGA3-207ENST00000506401 PIK3C2AO00443 1686 aa23.82■■□□□ 1.4
ITGA3-207ENST00000506401 NLRP6P59044 892 aa23.81■■□□□ 1.4
ITGA3-207ENST00000506401 FBLN1P23142 703 aa23.8■■□□□ 1.4
ITGA3-207ENST00000506401 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
ITGA3-207ENST00000506401 KRT28Q7Z3Y7 464 aa23.8■■□□□ 1.4
ITGA3-207ENST00000506401 PPM1GO15355 546 aaPredicted RBP23.78■■□□□ 1.4
ITGA3-207ENST00000506401 NUDCQ9Y266 331 aa23.78■■□□□ 1.4
ITGA3-207ENST00000506401 ZBED9Q6R2W3 1325 aa23.78■■□□□ 1.4
ITGA3-207ENST00000506401 SHPRHQ149N8 1683 aa23.78■■□□□ 1.4
ITGA3-207ENST00000506401 SLAIN2Q9P270 581 aa23.77■■□□□ 1.4
ITGA3-207ENST00000506401 BLMP54132 1417 aaPredicted RBP23.77■■□□□ 1.4
ITGA3-207ENST00000506401 USP54Q70EL1 1684 aa23.77■■□□□ 1.4
ITGA3-207ENST00000506401 PNPLA6Q8IY17 1366 aa23.77■■□□□ 1.4
ITGA3-207ENST00000506401 EMILIN1Q9Y6C2 1016 aa23.76■■□□□ 1.39
ITGA3-207ENST00000506401 XPCQ01831 940 aaPredicted RBP23.75■■□□□ 1.39
ITGA3-207ENST00000506401 RRS1Q15050 365 aaKnown RBP23.75■■□□□ 1.39
ITGA3-207ENST00000506401 NUTM2GQ5VZR2 741 aa23.75■■□□□ 1.39
ITGA3-207ENST00000506401 SMG6Q86US8 1419 aaKnown RBP23.75■■□□□ 1.39
ITGA3-207ENST00000506401 NPHP3Q7Z494 1330 aa23.75■■□□□ 1.39
ITGA3-207ENST00000506401 DIAPH1O60610 1272 aaKnown RBP23.75■■□□□ 1.39
ITGA3-207ENST00000506401 COL3A1P02461 1466 aaPredicted RBP23.73■■□□□ 1.39
ITGA3-207ENST00000506401 TRPM3Q9HCF6 1732 aaPredicted RBP23.73■■□□□ 1.39
ITGA3-207ENST00000506401 CDK12Q9NYV4 1490 aaPredicted RBP23.73■■□□□ 1.39
ITGA3-207ENST00000506401 LTBP4Q8N2S1 1624 aa23.72■■□□□ 1.39
ITGA3-207ENST00000506401 SOX12O15370 315 aa23.72■■□□□ 1.39
ITGA3-207ENST00000506401 BRINP3Q76B58 766 aa23.72■■□□□ 1.39
ITGA3-207ENST00000506401 MARF1Q9Y4F3 1742 aaKnown RBP23.72■■□□□ 1.39
ITGA3-207ENST00000506401 U2AF1L5P0DN76 240 aaPredicted RBP23.7■■□□□ 1.39
ITGA3-207ENST00000506401 U2AF1Q01081 240 aaKnown RBP eCLIP23.7■■□□□ 1.39
ITGA3-207ENST00000506401 U2SURPO15042 1029 aaKnown RBP23.7■■□□□ 1.38
ITGA3-207ENST00000506401 LMOD2Q6P5Q4 547 aa23.7■■□□□ 1.38
ITGA3-207ENST00000506401 SBNO1A3KN83 1393 aa23.68■■□□□ 1.38
ITGA3-207ENST00000506401 DDX17Q92841 729 aaKnown RBP23.68■■□□□ 1.38
ITGA3-207ENST00000506401 CCDC146Q8IYE0 955 aa23.67■■□□□ 1.38
ITGA3-207ENST00000506401 KCNH5Q8NCM2 988 aa23.67■■□□□ 1.38
ITGA3-207ENST00000506401 MAP3K19Q56UN5 1328 aa23.66■■□□□ 1.38
ITGA3-207ENST00000506401 SENP3-EIF4A1A0A087X0R7 540 aa23.66■■□□□ 1.38
ITGA3-207ENST00000506401 ALS2Q96Q42 1657 aa23.65■■□□□ 1.38
ITGA3-207ENST00000506401 AMPHP49418 695 aa23.65■■□□□ 1.38
ITGA3-207ENST00000506401 RUNDC1Q96C34 613 aa23.65■■□□□ 1.38
ITGA3-207ENST00000506401 PNNQ9H307 717 aaKnown RBP23.64■■□□□ 1.38
ITGA3-207ENST00000506401 SALL2Q9Y467 1007 aaPredicted RBP23.64■■□□□ 1.38
ITGA3-207ENST00000506401 PXDNQ92626 1479 aa23.64■■□□□ 1.37
ITGA3-207ENST00000506401 IL13P35225 146 aa23.63■■□□□ 1.37
ITGA3-207ENST00000506401 KIF24Q5T7B8 1368 aa23.63■■□□□ 1.37
ITGA3-207ENST00000506401 PEAK1Q9H792 1746 aa23.63■■□□□ 1.37
ITGA3-207ENST00000506401 FLT4P35916 1363 aa23.63■■□□□ 1.37
ITGA3-207ENST00000506401 APAF1O14727 1248 aa23.61■■□□□ 1.37
ITGA3-207ENST00000506401 NGEFQ8N5V2 710 aa23.61■■□□□ 1.37
ITGA3-207ENST00000506401 TNS3Q68CZ2 1445 aa23.61■■□□□ 1.37
ITGA3-207ENST00000506401 USP19O94966 1318 aa23.6■■□□□ 1.37
ITGA3-207ENST00000506401 GCP02774 474 aa23.6■■□□□ 1.37
ITGA3-207ENST00000506401 HSP90AB2PQ58FF8 381 aa23.6■■□□□ 1.37
ITGA3-207ENST00000506401 SLIT3O75094 1523 aa23.6■■□□□ 1.37
ITGA3-207ENST00000506401 SPATA31A3Q5VYP0 1347 aa23.6■■□□□ 1.37
ITGA3-207ENST00000506401 FCHSD2O94868 740 aa23.59■■□□□ 1.37
ITGA3-207ENST00000506401 NFAT5O94916 1531 aa23.59■■□□□ 1.37
ITGA3-207ENST00000506401 SOS2Q07890 1332 aaPredicted RBP23.59■■□□□ 1.37
ITGA3-207ENST00000506401 ARHGEF10O15013 1369 aa23.59■■□□□ 1.37
ITGA3-207ENST00000506401 EIF4A2Q14240 407 aaKnown RBP23.59■■□□□ 1.37
ITGA3-207ENST00000506401 LTN1O94822 1766 aa23.58■■□□□ 1.37
ITGA3-207ENST00000506401 PDE3BQ13370 1112 aa23.57■■□□□ 1.36
ITGA3-207ENST00000506401 RTL1A6NKG5 1358 aa23.57■■□□□ 1.36
ITGA3-207ENST00000506401 HOXC9P31274 260 aa23.56■■□□□ 1.36
ITGA3-207ENST00000506401 PLEKHG5O94827 1062 aa23.56■■□□□ 1.36
ITGA3-207ENST00000506401 TCP11L2Q8N4U5 519 aa23.56■■□□□ 1.36
ITGA3-207ENST00000506401 NHSL1Q5SYE7 1610 aa23.55■■□□□ 1.36
ITGA3-207ENST00000506401 NEFMP07197 916 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms