RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 COL24A1Q17RW2 1714 aa3.17□□□□□ -1.9
NEDD4-205ENST00000506154 MMP14P50281 582 aa3.17□□□□□ -1.9
NEDD4-205ENST00000506154 DDX12PQ92771 950 aa3.17□□□□□ -1.9
NEDD4-205ENST00000506154 ADAMTS13Q76LX8 1427 aa3.17□□□□□ -1.9
NEDD4-205ENST00000506154 PTPRUQ92729 1446 aa3.17□□□□□ -1.9
NEDD4-205ENST00000506154 TULP4Q9NRJ4 1543 aa3.17□□□□□ -1.9
NEDD4-205ENST00000506154 QRICH2Q9H0J4 1663 aa3.16□□□□□ -1.9
NEDD4-205ENST00000506154 LRRC37A3O60309 1634 aa3.16□□□□□ -1.9
NEDD4-205ENST00000506154 KIF1BO60333 1816 aa3.16□□□□□ -1.9
NEDD4-205ENST00000506154 WNK3Q9BYP7 1800 aa3.16□□□□□ -1.9
NEDD4-205ENST00000506154 COL18A1P39060 1754 aa3.16□□□□□ -1.9
NEDD4-205ENST00000506154 NHSL1Q5SYE7 1610 aa3.16□□□□□ -1.9
NEDD4-205ENST00000506154 SMG6Q86US8 1419 aaKnown RBP3.16□□□□□ -1.9
NEDD4-205ENST00000506154 RAB3GAP2Q9H2M9 1393 aa3.16□□□□□ -1.9
NEDD4-205ENST00000506154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.16□□□□□ -1.9
NEDD4-205ENST00000506154 HNRNPUL2Q1KMD3 747 aaKnown RBP3.16□□□□□ -1.9
NEDD4-205ENST00000506154 FBXW7Q969H0 707 aa3.16□□□□□ -1.9
NEDD4-205ENST00000506154 ANKRD50Q9ULJ7 1429 aa3.16□□□□□ -1.9
NEDD4-205ENST00000506154 GTF2E1P29083 439 aaPredicted RBP3.16□□□□□ -1.9
NEDD4-205ENST00000506154 PHF8Q9UPP1 1060 aa3.15□□□□□ -1.9
NEDD4-205ENST00000506154 DPYSL4O14531 572 aa3.15□□□□□ -1.9
NEDD4-205ENST00000506154 CCDC136Q96JN2 1154 aa3.15□□□□□ -1.9
NEDD4-205ENST00000506154 CCDC9Q9Y3X0 531 aaKnown RBP3.15□□□□□ -1.9
NEDD4-205ENST00000506154 CDK12Q9NYV4 1490 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-205ENST00000506154 RBM33Q96EV2 1170 aaKnown RBP3.15□□□□□ -1.91
NEDD4-205ENST00000506154 PLCH1Q4KWH8 1693 aa3.15□□□□□ -1.91
NEDD4-205ENST00000506154 IQSEC2Q5JU85 1478 aa3.15□□□□□ -1.91
NEDD4-205ENST00000506154 BCCIPQ9P287 314 aaKnown RBP eCLIP3.15□□□□□ -1.91
NEDD4-205ENST00000506154 SHANK3Q9BYB0 1731 aa3.15□□□□□ -1.91
NEDD4-205ENST00000506154 DIEXFQ68CQ4 756 aaKnown RBP3.14□□□□□ -1.91
NEDD4-205ENST00000506154 N4BP2Q86UW6 1770 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-205ENST00000506154 INSRP06213 1382 aa3.14□□□□□ -1.91
NEDD4-205ENST00000506154 PTCH1Q13635 1447 aa3.14□□□□□ -1.91
NEDD4-205ENST00000506154 COL3A1P02461 1466 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-205ENST00000506154 CHMP4AQ9BY43 222 aa3.14□□□□□ -1.91
NEDD4-205ENST00000506154 RNF39Q9H2S5 420 aa3.14□□□□□ -1.91
NEDD4-205ENST00000506154 ZNF831Q5JPB2 1677 aa3.14□□□□□ -1.91
NEDD4-205ENST00000506154 CDK11BP21127 795 aaKnown RBP3.14□□□□□ -1.91
NEDD4-205ENST00000506154 ABL2P42684 1182 aa3.14□□□□□ -1.91
NEDD4-205ENST00000506154 CALD1Q05682 793 aaKnown RBP3.14□□□□□ -1.91
NEDD4-205ENST00000506154 CDK11AQ9UQ88 783 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-205ENST00000506154 IPO4Q8TEX9 1081 aaKnown RBP3.14□□□□□ -1.91
NEDD4-205ENST00000506154 ZNF644Q9H582 1327 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-205ENST00000506154 FOSBP53539 338 aa3.13□□□□□ -1.91
NEDD4-205ENST00000506154 FAM208AQ9UK61 1670 aaKnown RBP3.13□□□□□ -1.91
NEDD4-205ENST00000506154 RETREG2Q8NC44 543 aa3.13□□□□□ -1.91
NEDD4-205ENST00000506154 TEX2Q8IWB9 1127 aa3.13□□□□□ -1.91
NEDD4-205ENST00000506154 RREB1Q92766 1687 aa3.13□□□□□ -1.91
NEDD4-205ENST00000506154 STAC3Q96MF2 364 aa3.13□□□□□ -1.91
NEDD4-205ENST00000506154 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-205ENST00000506154 PIK3C2AO00443 1686 aa3.12□□□□□ -1.91
NEDD4-205ENST00000506154 CHMP7Q8WUX9 453 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-205ENST00000506154 PAPPAQ13219 1627 aa3.12□□□□□ -1.91
NEDD4-205ENST00000506154 FAM212AQ96EL1 285 aa3.12□□□□□ -1.91
NEDD4-205ENST00000506154 PEAK1Q9H792 1746 aa3.12□□□□□ -1.91
NEDD4-205ENST00000506154 PARP4Q9UKK3 1724 aaKnown RBP3.12□□□□□ -1.91
NEDD4-205ENST00000506154 GRIPAP1Q4V328 841 aa3.12□□□□□ -1.91
NEDD4-205ENST00000506154 SIPA1L3O60292 1781 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-205ENST00000506154 SLIT3O75094 1523 aa3.12□□□□□ -1.91
NEDD4-205ENST00000506154 KIF15Q9NS87 1388 aa3.12□□□□□ -1.91
NEDD4-205ENST00000506154 SSUH2Q9Y2M2 353 aa3.12□□□□□ -1.91
NEDD4-205ENST00000506154 NCOA3Q9Y6Q9 1424 aa3.12□□□□□ -1.91
NEDD4-205ENST00000506154 EFCAB3Q8N7B9 438 aa3.11□□□□□ -1.91
NEDD4-205ENST00000506154 NRAPQ86VF7 1730 aa3.11□□□□□ -1.91
NEDD4-205ENST00000506154 FAM135BQ49AJ0 1406 aa3.11□□□□□ -1.91
NEDD4-205ENST00000506154 IRF5Q13568 498 aa3.11□□□□□ -1.91
NEDD4-205ENST00000506154 POM121CA8CG34 1229 aa3.11□□□□□ -1.91
NEDD4-205ENST00000506154 PPM1GO15355 546 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-205ENST00000506154 PRR29P0C7W0 189 aa3.11□□□□□ -1.91
NEDD4-205ENST00000506154 AHDC1Q5TGY3 1603 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-205ENST00000506154 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.1□□□□□ -1.91
NEDD4-205ENST00000506154 CPSF1Q10570 1443 aaKnown RBP3.1□□□□□ -1.91
NEDD4-205ENST00000506154 RRP9O43818 475 aaKnown RBP3.1□□□□□ -1.91
NEDD4-205ENST00000506154 PDE4DQ08499 809 aa3.1□□□□□ -1.91
NEDD4-205ENST00000506154 CCDC144AA2RUR9 1427 aa3.1□□□□□ -1.91
NEDD4-205ENST00000506154 NFAT5O94916 1531 aa3.1□□□□□ -1.91
NEDD4-205ENST00000506154 GDPD2Q9HCC8 539 aa3.1□□□□□ -1.91
NEDD4-205ENST00000506154 COL16A1Q07092 1604 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-205ENST00000506154 NCKAP5LQ9HCH0 1330 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 FBXO31Q5XUX0 539 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-205ENST00000506154 FAM43AQ8N2R8 423 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 NKTRP30414 1462 aaKnown RBP3.09□□□□□ -1.91
NEDD4-205ENST00000506154 DSG3P32926 999 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 PDE6BP35913 854 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 SLC20A2Q08357 652 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 PROCA1Q8NCQ7 364 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-205ENST00000506154 CCDC102AQ96A19 550 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 ANO2Q9NQ90 1003 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 TMEM51Q9NW97 253 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 C9orf131Q5VYM1 1079 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 MFRPQ9BY79 579 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 NPC1L1Q9UHC9 1359 aa3.09□□□□□ -1.91
NEDD4-205ENST00000506154 PSEN1P49768 467 aa3.09□□□□□ -1.92
NEDD4-205ENST00000506154 TSPOAP1O95153 1857 aa3.09□□□□□ -1.92
NEDD4-205ENST00000506154 ANKRD30AQ9BXX3 1397 aa3.09□□□□□ -1.92
NEDD4-205ENST00000506154 PLEKHG2Q9H7P9 1386 aa3.09□□□□□ -1.92
NEDD4-205ENST00000506154 NUP155O75694 1391 aa3.09□□□□□ -1.92
NEDD4-205ENST00000506154 MDM2Q00987 491 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-205ENST00000506154 ITSN1Q15811 1721 aa3.08□□□□□ -1.92
NEDD4-205ENST00000506154 ATP7BP35670 1465 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms