RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PROSER2Q86WR7 435 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-204ENST00000505804 FNBP4Q8N3X1 1017 aaPredicted RBP8.19□□□□□ -1.1
TOPBP1-204ENST00000505804 UNC93B1Q9H1C4 597 aa8.19□□□□□ -1.1
TOPBP1-204ENST00000505804 PLSCR2Q9NRY7 297 aa8.19□□□□□ -1.1
TOPBP1-204ENST00000505804 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
TOPBP1-204ENST00000505804 TRAK2O60296 914 aa8.18□□□□□ -1.1
TOPBP1-204ENST00000505804 IRF5Q13568 498 aa8.18□□□□□ -1.1
TOPBP1-204ENST00000505804 SUPT5HO00267 1087 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-204ENST00000505804 PNMA1Q8ND90 353 aa8.17□□□□□ -1.1
TOPBP1-204ENST00000505804 BAP1Q92560 729 aa8.17□□□□□ -1.1
TOPBP1-204ENST00000505804 ZBTB24O43167 697 aaPredicted RBP8.16□□□□□ -1.1
TOPBP1-204ENST00000505804 ARMC2Q8NEN0 867 aa8.16□□□□□ -1.1
TOPBP1-204ENST00000505804 ZNF330Q9Y3S2 320 aaPredicted RBP8.16□□□□□ -1.1
TOPBP1-204ENST00000505804 ZNF777Q9ULD5 760 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-204ENST00000505804 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
TOPBP1-204ENST00000505804 LIAT1Q6ZQX7 453 aa8.14□□□□□ -1.11
TOPBP1-204ENST00000505804 WWC1Q8IX03 1113 aa8.14□□□□□ -1.11
TOPBP1-204ENST00000505804 A0A0G2JS52 829 aa8.13□□□□□ -1.11
TOPBP1-204ENST00000505804 VAC14Q08AM6 782 aa8.13□□□□□ -1.11
TOPBP1-204ENST00000505804 PDXDC2PQ6P474 469 aa8.13□□□□□ -1.11
TOPBP1-204ENST00000505804 EMID1Q96A84 441 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-204ENST00000505804 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-204ENST00000505804 ARID3CA6NKF2 412 aa8.12□□□□□ -1.11
TOPBP1-204ENST00000505804 TRIM32Q13049 653 aa8.12□□□□□ -1.11
TOPBP1-204ENST00000505804 WASHC4Q2M389 1173 aa8.12□□□□□ -1.11
TOPBP1-204ENST00000505804 NBPF14Q5TI25 921 aa8.12□□□□□ -1.11
TOPBP1-204ENST00000505804 GPKOWQ92917 476 aaPredicted RBP eCLIP8.12□□□□□ -1.11
TOPBP1-204ENST00000505804 POM121CA8CG34 1229 aa8.11□□□□□ -1.11
TOPBP1-204ENST00000505804 ZBBXA8MT70 800 aa8.11□□□□□ -1.11
TOPBP1-204ENST00000505804 FBXO45P0C2W1 286 aa8.11□□□□□ -1.11
TOPBP1-204ENST00000505804 RPIAP49247 311 aa8.11□□□□□ -1.11
TOPBP1-204ENST00000505804 SH3BP2P78314 561 aa8.11□□□□□ -1.11
TOPBP1-204ENST00000505804 ZNF511Q8NB15 262 aa8.11□□□□□ -1.11
TOPBP1-204ENST00000505804 FOXJ1Q92949 421 aa8.11□□□□□ -1.11
TOPBP1-204ENST00000505804 CD2BP2O95400 341 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-204ENST00000505804 SLC19A1P41440 591 aa8.1□□□□□ -1.11
TOPBP1-204ENST00000505804 PTK2Q05397 1052 aa8.1□□□□□ -1.11
TOPBP1-204ENST00000505804 NR1H3Q13133 447 aa8.1□□□□□ -1.11
TOPBP1-204ENST00000505804 AGERQ15109 404 aa8.1□□□□□ -1.11
TOPBP1-204ENST00000505804 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
TOPBP1-204ENST00000505804 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
TOPBP1-204ENST00000505804 SKOR1P84550 965 aa8.09□□□□□ -1.11
TOPBP1-204ENST00000505804 ARHGAP9Q9BRR9 750 aa8.09□□□□□ -1.11
TOPBP1-204ENST00000505804 GPSM3Q9Y4H4 160 aa8.09□□□□□ -1.11
TOPBP1-204ENST00000505804 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
TOPBP1-204ENST00000505804 C4orf48Q5BLP8 95 aa8.08□□□□□ -1.12
TOPBP1-204ENST00000505804 ZBTB33Q86T24 672 aa8.08□□□□□ -1.12
TOPBP1-204ENST00000505804 BPHLQ86WA6 291 aaPredicted RBP8.08□□□□□ -1.12
TOPBP1-204ENST00000505804 CARD14Q9BXL6 1004 aa8.08□□□□□ -1.12
TOPBP1-204ENST00000505804 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
TOPBP1-204ENST00000505804 SH3RF1Q7Z6J0 888 aa8.07□□□□□ -1.12
TOPBP1-204ENST00000505804 ADAM32Q8TC27 787 aa8.07□□□□□ -1.12
TOPBP1-204ENST00000505804 C1orf115Q9H7X2 142 aa8.07□□□□□ -1.12
TOPBP1-204ENST00000505804 WNT7BP56706 349 aa8.06□□□□□ -1.12
TOPBP1-204ENST00000505804 PRKD2Q9BZL6 878 aa8.06□□□□□ -1.12
TOPBP1-204ENST00000505804 EIF4G2P78344 907 aaKnown RBP eCLIP8.05□□□□□ -1.12
TOPBP1-204ENST00000505804 RC3H1Q5TC82 1133 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-204ENST00000505804 SPRYD7Q5W111 196 aa8.05□□□□□ -1.12
TOPBP1-204ENST00000505804 ADAMTS19Q8TE59 1207 aa8.05□□□□□ -1.12
TOPBP1-204ENST00000505804 ALG2Q9H553 416 aa8.05□□□□□ -1.12
TOPBP1-204ENST00000505804 GLMNQ92990 594 aa8.04□□□□□ -1.12
TOPBP1-204ENST00000505804 CALR3Q96L12 384 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-204ENST00000505804 PCDHB9Q9Y5E1 797 aa8.04□□□□□ -1.12
TOPBP1-204ENST00000505804 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
TOPBP1-204ENST00000505804 ERFEQ4G0M1 354 aa8.03□□□□□ -1.12
TOPBP1-204ENST00000505804 EHBP1Q8NDI1 1231 aa8.03□□□□□ -1.12
TOPBP1-204ENST00000505804 VARSP26640 1264 aaKnown RBP8.02□□□□□ -1.13
TOPBP1-204ENST00000505804 SOX11P35716 441 aa8.02□□□□□ -1.13
TOPBP1-204ENST00000505804 ZNF697Q5TEC3 545 aa8.02□□□□□ -1.13
TOPBP1-204ENST00000505804 ZNF598Q86UK7 904 aaKnown RBP8.02□□□□□ -1.13
TOPBP1-204ENST00000505804 DZIP3Q86Y13 1208 aaKnown RBP8.02□□□□□ -1.13
TOPBP1-204ENST00000505804 V9GY48 417 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-204ENST00000505804 FOXC1Q12948 553 aa8.01□□□□□ -1.13
TOPBP1-204ENST00000505804 C1QTNF2Q9BXJ5 285 aa8.01□□□□□ -1.13
TOPBP1-204ENST00000505804 WNT7AO00755 349 aa8□□□□□ -1.13
TOPBP1-204ENST00000505804 FAM174AQ8TBP5 190 aa8□□□□□ -1.13
TOPBP1-204ENST00000505804 MRGPRX2Q96LB1 330 aa8□□□□□ -1.13
TOPBP1-204ENST00000505804 CEP126Q9P2H0 1117 aa8□□□□□ -1.13
TOPBP1-204ENST00000505804 SIAH2O43255 324 aa7.99□□□□□ -1.13
TOPBP1-204ENST00000505804 CCDC82Q8N4S0 544 aa7.99□□□□□ -1.13
TOPBP1-204ENST00000505804 ARID3AQ99856 593 aa7.99□□□□□ -1.13
TOPBP1-204ENST00000505804 MCCD1P59942 119 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-204ENST00000505804 ARID5BQ14865 1188 aa7.98□□□□□ -1.13
TOPBP1-204ENST00000505804 TRMT44Q8IYL2 757 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-204ENST00000505804 SLC10A4Q96EP9 437 aa7.98□□□□□ -1.13
TOPBP1-204ENST00000505804 PKD2L1Q9P0L9 805 aa7.98□□□□□ -1.13
TOPBP1-204ENST00000505804 GIGYF1O75420 1035 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-204ENST00000505804 VASH1Q7L8A9 365 aaPredicted RBP7.96□□□□□ -1.14
TOPBP1-204ENST00000505804 ZNF592Q92610 1267 aa7.96□□□□□ -1.14
TOPBP1-204ENST00000505804 CCDC97Q96F63 343 aaPredicted RBP7.96□□□□□ -1.14
TOPBP1-204ENST00000505804 UCN2Q96RP3 112 aa7.96□□□□□ -1.14
TOPBP1-204ENST00000505804 SERPINA10Q9UK55 444 aa7.96□□□□□ -1.14
TOPBP1-204ENST00000505804 TLL2Q9Y6L7 1015 aa7.96□□□□□ -1.14
TOPBP1-204ENST00000505804 PIK3CDO00329 1044 aa7.95□□□□□ -1.14
TOPBP1-204ENST00000505804 GDF9O60383 454 aa7.95□□□□□ -1.14
TOPBP1-204ENST00000505804 CDK15Q96Q40 435 aa7.95□□□□□ -1.14
TOPBP1-204ENST00000505804 KCTD15Q96SI1 283 aaPredicted RBP7.95□□□□□ -1.14
TOPBP1-204ENST00000505804 TNFRSF10AO00220 468 aa7.94□□□□□ -1.14
TOPBP1-204ENST00000505804 GRM5P41594 1212 aa7.94□□□□□ -1.14
TOPBP1-204ENST00000505804 TSGA10IPQ3SY00 556 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms