RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
KDM3B-203ENST00000505756 USP21Q9UK80 565 aa16.13■□□□□ 0.17
KDM3B-203ENST00000505756 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
KDM3B-203ENST00000505756 RXRBP28702 533 aa16.12■□□□□ 0.17
KDM3B-203ENST00000505756 BRD4O60885 1362 aaPredicted RBP16.12■□□□□ 0.17
KDM3B-203ENST00000505756 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
KDM3B-203ENST00000505756 QTRT2Q9H974 415 aaKnown RBP16.11■□□□□ 0.17
KDM3B-203ENST00000505756 SLC24A1O60721 1099 aa16.1■□□□□ 0.17
KDM3B-203ENST00000505756 TRPC5Q9UL62 973 aaPredicted RBP16.1■□□□□ 0.17
KDM3B-203ENST00000505756 BCL9LQ86UU0 1499 aa16.1■□□□□ 0.17
KDM3B-203ENST00000505756 SLIT2O94813 1529 aa16.09■□□□□ 0.17
KDM3B-203ENST00000505756 ST20-MTHFSA0A0A6YYL1 179 aa16.09■□□□□ 0.17
KDM3B-203ENST00000505756 RBM6P78332 1123 aaKnown RBP16.09■□□□□ 0.17
KDM3B-203ENST00000505756 USP6P35125 1406 aa16.09■□□□□ 0.17
KDM3B-203ENST00000505756 CDK12Q9NYV4 1490 aaPredicted RBP16.09■□□□□ 0.17
KDM3B-203ENST00000505756 CRYBG1Q9Y4K1 1723 aa16.08■□□□□ 0.17
KDM3B-203ENST00000505756 PUS7Q96PZ0 661 aaKnown RBP16.08■□□□□ 0.16
KDM3B-203ENST00000505756 TESK2Q96S53 571 aa16.08■□□□□ 0.16
KDM3B-203ENST00000505756 USP47Q96K76 1375 aa16.08■□□□□ 0.16
KDM3B-203ENST00000505756 ATRNO75882 1429 aa16.08■□□□□ 0.16
KDM3B-203ENST00000505756 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.08■□□□□ 0.16
KDM3B-203ENST00000505756 ABTB2Q8N961 1025 aa16.07■□□□□ 0.16
KDM3B-203ENST00000505756 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
KDM3B-203ENST00000505756 UNC5CLQ8IV45 518 aa16.06■□□□□ 0.16
KDM3B-203ENST00000505756 PLCH1Q4KWH8 1693 aa16.05■□□□□ 0.16
KDM3B-203ENST00000505756 PHRF1Q9P1Y6 1649 aaKnown RBP16.05■□□□□ 0.16
KDM3B-203ENST00000505756 CPSF1Q10570 1443 aaKnown RBP16.05■□□□□ 0.16
KDM3B-203ENST00000505756 SSH2Q76I76 1423 aa16.05■□□□□ 0.16
KDM3B-203ENST00000505756 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
KDM3B-203ENST00000505756 FAM83GA6ND36 823 aa16.04■□□□□ 0.16
KDM3B-203ENST00000505756 NUTM2GQ5VZR2 741 aa16.04■□□□□ 0.16
KDM3B-203ENST00000505756 AKAP12Q02952 1782 aa16.04■□□□□ 0.16
KDM3B-203ENST00000505756 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
KDM3B-203ENST00000505756 USP19O94966 1318 aa16.03■□□□□ 0.16
KDM3B-203ENST00000505756 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
KDM3B-203ENST00000505756 RGS12O14924 1447 aa16.02■□□□□ 0.16
KDM3B-203ENST00000505756 KTN1Q86UP2 1357 aaKnown RBP16.02■□□□□ 0.16
KDM3B-203ENST00000505756 NRKQ7Z2Y5 1582 aa16.02■□□□□ 0.16
KDM3B-203ENST00000505756 TMC1Q8TDI8 760 aa16.02■□□□□ 0.16
KDM3B-203ENST00000505756 GJD4Q96KN9 370 aaPredicted RBP16.02■□□□□ 0.16
KDM3B-203ENST00000505756 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
KDM3B-203ENST00000505756 TTC21AQ8NDW8 1320 aa16.01■□□□□ 0.15
KDM3B-203ENST00000505756 TMF1P82094 1093 aa16.01■□□□□ 0.15
KDM3B-203ENST00000505756 PRDM11Q9NQV5 511 aa16.01■□□□□ 0.15
KDM3B-203ENST00000505756 CD163L1Q9NR16 1453 aa16.01■□□□□ 0.15
KDM3B-203ENST00000505756 KIAA0232Q92628 1395 aa16■□□□□ 0.15
KDM3B-203ENST00000505756 TTC21BQ7Z4L5 1316 aa16■□□□□ 0.15
KDM3B-203ENST00000505756 MON2Q7Z3U7 1717 aa16■□□□□ 0.15
KDM3B-203ENST00000505756 PIK3C2AO00443 1686 aa16■□□□□ 0.15
KDM3B-203ENST00000505756 NLRP6P59044 892 aa16■□□□□ 0.15
KDM3B-203ENST00000505756 VPS72Q15906 364 aa16■□□□□ 0.15
KDM3B-203ENST00000505756 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
KDM3B-203ENST00000505756 BTG4Q9NY30 223 aa16■□□□□ 0.15
KDM3B-203ENST00000505756 HDGFL2Q7Z4V5 671 aaPredicted RBP15.99■□□□□ 0.15
KDM3B-203ENST00000505756 TERF2IPQ9NYB0 399 aa15.99■□□□□ 0.15
KDM3B-203ENST00000505756 NRAPQ86VF7 1730 aa15.99■□□□□ 0.15
KDM3B-203ENST00000505756 CPDO75976 1380 aa15.99■□□□□ 0.15
KDM3B-203ENST00000505756 SLIT3O75094 1523 aa15.99■□□□□ 0.15
KDM3B-203ENST00000505756 GCP02774 474 aa15.98■□□□□ 0.15
KDM3B-203ENST00000505756 GLI3P10071 1580 aa15.98■□□□□ 0.15
KDM3B-203ENST00000505756 ZC3H6P61129 1189 aaKnown RBP15.98■□□□□ 0.15
KDM3B-203ENST00000505756 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
KDM3B-203ENST00000505756 A0A1W2PP64 1363 aa15.97■□□□□ 0.15
KDM3B-203ENST00000505756 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.15
KDM3B-203ENST00000505756 CHRNA2Q15822 529 aa15.96■□□□□ 0.15
KDM3B-203ENST00000505756 CCDC9Q9Y3X0 531 aaKnown RBP15.95■□□□□ 0.14
KDM3B-203ENST00000505756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.94■□□□□ 0.14
KDM3B-203ENST00000505756 KCNH5Q8NCM2 988 aa15.94■□□□□ 0.14
KDM3B-203ENST00000505756 LMO7Q8WWI1 1683 aa15.93■□□□□ 0.14
KDM3B-203ENST00000505756 USP31Q70CQ4 1352 aa15.93■□□□□ 0.14
KDM3B-203ENST00000505756 ANKRD36BQ8N2N9 1353 aa15.93■□□□□ 0.14
KDM3B-203ENST00000505756 EIF4G2P78344 907 aaKnown RBP eCLIP15.93■□□□□ 0.14
KDM3B-203ENST00000505756 ONECUT3O60422 494 aaPredicted RBP15.92■□□□□ 0.14
KDM3B-203ENST00000505756 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
KDM3B-203ENST00000505756 SPATA31A5Q5VU36 1347 aa15.92■□□□□ 0.14
KDM3B-203ENST00000505756 SPATA31A7Q8IWB4 1347 aa15.92■□□□□ 0.14
KDM3B-203ENST00000505756 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
KDM3B-203ENST00000505756 CAMTA1Q9Y6Y1 1673 aa15.91■□□□□ 0.14
KDM3B-203ENST00000505756 AATKQ6ZMQ8 1374 aa15.9■□□□□ 0.14
KDM3B-203ENST00000505756 NME9Q86XW9 330 aa15.9■□□□□ 0.14
KDM3B-203ENST00000505756 UPF1Q92900 1129 aaKnown RBP eCLIP15.9■□□□□ 0.14
KDM3B-203ENST00000505756 NFAT5O94916 1531 aa15.89■□□□□ 0.13
KDM3B-203ENST00000505756 HSPA5P11021 654 aaKnown RBP15.89■□□□□ 0.13
KDM3B-203ENST00000505756 EVA1CP58658 441 aa15.89■□□□□ 0.13
KDM3B-203ENST00000505756 SEPT12Q8IYM1 358 aa15.89■□□□□ 0.13
KDM3B-203ENST00000505756 ZRANB1Q9UGI0 708 aa15.89■□□□□ 0.13
KDM3B-203ENST00000505756 SPATA31A1Q5TZJ5 1347 aa15.89■□□□□ 0.13
KDM3B-203ENST00000505756 ZBTB7CA1YPR0 619 aa15.88■□□□□ 0.13
KDM3B-203ENST00000505756 ARHGEF25Q86VW2 580 aa15.88■□□□□ 0.13
KDM3B-203ENST00000505756 COL5A2P05997 1499 aaPredicted RBP15.88■□□□□ 0.13
KDM3B-203ENST00000505756 OVOS2A0A0J9YW53 1432 aa15.87■□□□□ 0.13
KDM3B-203ENST00000505756 OVOS2Q6IE36 1432 aa15.87■□□□□ 0.13
KDM3B-203ENST00000505756 SOX12O15370 315 aa15.87■□□□□ 0.13
KDM3B-203ENST00000505756 FAM98CQ17RN3 349 aaKnown RBP15.87■□□□□ 0.13
KDM3B-203ENST00000505756 MYOM1P52179 1685 aa15.86■□□□□ 0.13
KDM3B-203ENST00000505756 COL18A1P39060 1754 aa15.86■□□□□ 0.13
KDM3B-203ENST00000505756 ABCC6O95255 1503 aa15.86■□□□□ 0.13
KDM3B-203ENST00000505756 A0A0G2JS52 829 aa15.85■□□□□ 0.13
KDM3B-203ENST00000505756 MYT1Q01538 1121 aa15.85■□□□□ 0.13
KDM3B-203ENST00000505756 LARP1Q6PKG0 1096 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms