RNA–Protein interactions for RNA: ENST00000505566.1

FBXO4-204, Transcript of F-box protein 4, humanhuman

TSL 2

Gene FBXO4, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-204ENST00000505566 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
FBXO4-204ENST00000505566 GPBP1L1Q9HC44 474 aaPredicted RBP12.05□□□□□ -0.48
FBXO4-204ENST00000505566 GMPR2Q9P2T1 348 aaKnown RBP12.05□□□□□ -0.48
FBXO4-204ENST00000505566 RTL5Q5HYW3 569 aaPredicted RBP12.04□□□□□ -0.48
FBXO4-204ENST00000505566 EHBP1Q8NDI1 1231 aa12.04□□□□□ -0.48
FBXO4-204ENST00000505566 ALDH1A1P00352 501 aa12.02□□□□□ -0.49
FBXO4-204ENST00000505566 CLK2P49760 499 aaKnown RBP12.02□□□□□ -0.49
FBXO4-204ENST00000505566 KDM4CQ9H3R0 1056 aa12□□□□□ -0.49
FBXO4-204ENST00000505566 TLL2Q9Y6L7 1015 aa12□□□□□ -0.49
FBXO4-204ENST00000505566 LCE2AQ5TA79 106 aaPredicted RBP11.99□□□□□ -0.49
FBXO4-204ENST00000505566 FAM117AQ9C073 453 aa11.99□□□□□ -0.49
FBXO4-204ENST00000505566 ATP13A2Q9NQ11 1180 aa11.99□□□□□ -0.49
FBXO4-204ENST00000505566 POLR3EQ9NVU0 708 aa11.99□□□□□ -0.49
FBXO4-204ENST00000505566 PLEKHG3A1L390 1219 aa11.98□□□□□ -0.49
FBXO4-204ENST00000505566 CTHP32929 405 aa11.98□□□□□ -0.49
FBXO4-204ENST00000505566 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
FBXO4-204ENST00000505566 FOXJ1Q92949 421 aa11.97□□□□□ -0.49
FBXO4-204ENST00000505566 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
FBXO4-204ENST00000505566 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
FBXO4-204ENST00000505566 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
FBXO4-204ENST00000505566 NUTM2AQ8IVF1 878 aaPredicted RBP11.95□□□□□ -0.5
FBXO4-204ENST00000505566 MPNDQ8N594 471 aa11.95□□□□□ -0.5
FBXO4-204ENST00000505566 VARSP26640 1264 aaKnown RBP11.94□□□□□ -0.5
FBXO4-204ENST00000505566 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
FBXO4-204ENST00000505566 SNRPBP14678 240 aaKnown RBP11.93□□□□□ -0.5
FBXO4-204ENST00000505566 PROCA1Q8NCQ7 364 aaPredicted RBP11.93□□□□□ -0.5
FBXO4-204ENST00000505566 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.93□□□□□ -0.5
FBXO4-204ENST00000505566 C11orf95C9JLR9 678 aaPredicted RBP11.92□□□□□ -0.5
FBXO4-204ENST00000505566 SH3D19Q5HYK7 790 aa11.92□□□□□ -0.5
FBXO4-204ENST00000505566 TSC1Q92574 1164 aa11.92□□□□□ -0.5
FBXO4-204ENST00000505566 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
FBXO4-204ENST00000505566 TRIM46Q7Z4K8 759 aa11.91□□□□□ -0.5
FBXO4-204ENST00000505566 TRIM47Q96LD4 638 aa11.91□□□□□ -0.5
FBXO4-204ENST00000505566 CTDSPL2Q05D32 466 aa11.9□□□□□ -0.5
FBXO4-204ENST00000505566 KLF16Q9BXK1 252 aaPredicted RBP11.9□□□□□ -0.5
FBXO4-204ENST00000505566 BMP1P13497 986 aa11.89□□□□□ -0.51
FBXO4-204ENST00000505566 LCE2CQ5TA81 110 aa11.89□□□□□ -0.51
FBXO4-204ENST00000505566 SH3RF1Q7Z6J0 888 aa11.89□□□□□ -0.51
FBXO4-204ENST00000505566 CDK15Q96Q40 435 aa11.89□□□□□ -0.51
FBXO4-204ENST00000505566 WASF2Q9Y6W5 498 aa11.89□□□□□ -0.51
FBXO4-204ENST00000505566 HELBQ8NG08 1087 aaPredicted RBP11.88□□□□□ -0.51
FBXO4-204ENST00000505566 C1QTNF2Q9BXJ5 285 aa11.88□□□□□ -0.51
FBXO4-204ENST00000505566 NNTQ13423 1086 aa11.87□□□□□ -0.51
FBXO4-204ENST00000505566 PPP2R2DQ66LE6 453 aa11.87□□□□□ -0.51
FBXO4-204ENST00000505566 DDRGK1Q96HY6 314 aa11.87□□□□□ -0.51
FBXO4-204ENST00000505566 TREML4Q6UXN2 200 aa11.86□□□□□ -0.51
FBXO4-204ENST00000505566 SH3BP5LQ7L8J4 393 aa11.86□□□□□ -0.51
FBXO4-204ENST00000505566 CAPN5O15484 640 aaPredicted RBP11.85□□□□□ -0.51
FBXO4-204ENST00000505566 ADH1CP00326 375 aa11.85□□□□□ -0.51
FBXO4-204ENST00000505566 NFX1Q12986 1120 aaKnown RBP11.85□□□□□ -0.51
FBXO4-204ENST00000505566 FAM174AQ8TBP5 190 aa11.85□□□□□ -0.51
FBXO4-204ENST00000505566 LRRN4Q8WUT4 740 aa11.85□□□□□ -0.51
FBXO4-204ENST00000505566 NR3C2P08235 984 aa11.84□□□□□ -0.51
FBXO4-204ENST00000505566 TIMP2P16035 220 aa11.84□□□□□ -0.51
FBXO4-204ENST00000505566 GRM5P41594 1212 aa11.84□□□□□ -0.51
FBXO4-204ENST00000505566 BPHLQ86WA6 291 aaPredicted RBP11.82□□□□□ -0.52
FBXO4-204ENST00000505566 SENP2Q9HC62 589 aa11.82□□□□□ -0.52
FBXO4-204ENST00000505566 ARMC2Q8NEN0 867 aa11.79□□□□□ -0.52
FBXO4-204ENST00000505566 OCSTAMPQ9BR26 566 aa11.79□□□□□ -0.52
FBXO4-204ENST00000505566 WDR4P57081 412 aaKnown RBP11.78□□□□□ -0.52
FBXO4-204ENST00000505566 NBPF14Q5TI25 921 aa11.78□□□□□ -0.52
FBXO4-204ENST00000505566 TRMT44Q8IYL2 757 aaKnown RBP11.78□□□□□ -0.52
FBXO4-204ENST00000505566 KIFC2Q96AC6 838 aa11.78□□□□□ -0.52
FBXO4-204ENST00000505566 ARID5BQ14865 1188 aa11.77□□□□□ -0.53
FBXO4-204ENST00000505566 AGERQ15109 404 aa11.77□□□□□ -0.53
FBXO4-204ENST00000505566 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
FBXO4-204ENST00000505566 HMX1Q9NP08 348 aaPredicted RBP11.77□□□□□ -0.53
FBXO4-204ENST00000505566 NR6A1Q15406 480 aa11.76□□□□□ -0.53
FBXO4-204ENST00000505566 EPS8L1Q8TE68 723 aa11.76□□□□□ -0.53
FBXO4-204ENST00000505566 ITPKCQ96DU7 683 aa11.76□□□□□ -0.53
FBXO4-204ENST00000505566 ZFP42Q96MM3 310 aa11.76□□□□□ -0.53
FBXO4-204ENST00000505566 MAP4K5Q9Y4K4 846 aa11.76□□□□□ -0.53
FBXO4-204ENST00000505566 WFS1O76024 890 aa11.75□□□□□ -0.53
FBXO4-204ENST00000505566 NR5A1Q13285 461 aa11.75□□□□□ -0.53
FBXO4-204ENST00000505566 ERFEQ4G0M1 354 aa11.75□□□□□ -0.53
FBXO4-204ENST00000505566 GPKOWQ92917 476 aaPredicted RBP eCLIP11.75□□□□□ -0.53
FBXO4-204ENST00000505566 FKBPLQ9UIM3 349 aa11.74□□□□□ -0.53
FBXO4-204ENST00000505566 MAGEB6P1A0A0J9YX57 407 aa11.73□□□□□ -0.53
FBXO4-204ENST00000505566 MRPL14Q6P1L8 145 aaKnown RBP11.73□□□□□ -0.53
FBXO4-204ENST00000505566 TERTO14746 1132 aaKnown RBP11.72□□□□□ -0.53
FBXO4-204ENST00000505566 AP1G2O75843 785 aa11.72□□□□□ -0.53
FBXO4-204ENST00000505566 ZIC2O95409 532 aaPredicted RBP11.72□□□□□ -0.53
FBXO4-204ENST00000505566 PDXDC2PQ6P474 469 aa11.72□□□□□ -0.53
FBXO4-204ENST00000505566 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
FBXO4-204ENST00000505566 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
FBXO4-204ENST00000505566 FSHRP23945 695 aa11.71□□□□□ -0.53
FBXO4-204ENST00000505566 RFC5P40937 340 aa11.71□□□□□ -0.53
FBXO4-204ENST00000505566 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
FBXO4-204ENST00000505566 GOPCQ9HD26 462 aa11.71□□□□□ -0.53
FBXO4-204ENST00000505566 PURBQ96QR8 312 aaKnown RBP11.69□□□□□ -0.54
FBXO4-204ENST00000505566 NEUROD2Q15784 382 aa11.68□□□□□ -0.54
FBXO4-204ENST00000505566 MEIOBQ8N635 442 aa11.68□□□□□ -0.54
FBXO4-204ENST00000505566 TRIM34Q9BYJ4 488 aa11.68□□□□□ -0.54
FBXO4-204ENST00000505566 ZC3H4Q9UPT8 1303 aaKnown RBP11.67□□□□□ -0.54
FBXO4-204ENST00000505566 VASH1Q7L8A9 365 aaPredicted RBP11.67□□□□□ -0.54
FBXO4-204ENST00000505566 WIPF1O43516 503 aa11.66□□□□□ -0.54
FBXO4-204ENST00000505566 ARHGAP9Q9BRR9 750 aa11.66□□□□□ -0.54
FBXO4-204ENST00000505566 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
FBXO4-204ENST00000505566 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
FBXO4-204ENST00000505566 NXF1Q9UBU9 619 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms