RNA–Protein interactions for RNA: ENST00000505548.5

UBE2D2-205, Transcript of ubiquitin conjugating enzyme E2 D2, humanhuman

TSL 1 (best) BASIC

Gene UBE2D2, Length 1,113 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D2-205ENST00000505548 RXRBP28702 533 aa34.51■■■■□ 3.12
UBE2D2-205ENST00000505548 FNBP4Q8N3X1 1017 aaPredicted RBP34.51■■■■□ 3.12
UBE2D2-205ENST00000505548 SBNO2Q9Y2G9 1366 aa34.49■■■■□ 3.11
UBE2D2-205ENST00000505548 ABCA3Q99758 1704 aa34.44■■■■□ 3.1
UBE2D2-205ENST00000505548 TRPC5Q9UL62 973 aaPredicted RBP34.43■■■■□ 3.1
UBE2D2-205ENST00000505548 ATAD2Q6PL18 1390 aa34.42■■■■□ 3.1
UBE2D2-205ENST00000505548 RBM6P78332 1123 aaKnown RBP34.42■■■■□ 3.1
UBE2D2-205ENST00000505548 ST20-MTHFSA0A0A6YYL1 179 aa34.41■■■■□ 3.1
UBE2D2-205ENST00000505548 NUTM2GQ5VZR2 741 aa34.41■■■■□ 3.1
UBE2D2-205ENST00000505548 ABTB2Q8N961 1025 aa34.4■■■■□ 3.1
UBE2D2-205ENST00000505548 BCL9LQ86UU0 1499 aa34.39■■■■□ 3.1
UBE2D2-205ENST00000505548 SLIT2O94813 1529 aa34.35■■■■□ 3.09
UBE2D2-205ENST00000505548 UNC5CLQ8IV45 518 aa34.35■■■■□ 3.09
UBE2D2-205ENST00000505548 USP6P35125 1406 aa34.35■■■■□ 3.09
UBE2D2-205ENST00000505548 BRD4O60885 1362 aaPredicted RBP34.35■■■■□ 3.09
UBE2D2-205ENST00000505548 FAM83GA6ND36 823 aa34.34■■■■□ 3.09
UBE2D2-205ENST00000505548 ZNF692Q9BU19 519 aaPredicted RBP34.34■■■■□ 3.09
UBE2D2-205ENST00000505548 USP47Q96K76 1375 aa34.34■■■■□ 3.09
UBE2D2-205ENST00000505548 ATRNO75882 1429 aa34.33■■■■□ 3.09
UBE2D2-205ENST00000505548 SLC24A1O60721 1099 aa34.33■■■■□ 3.09
UBE2D2-205ENST00000505548 TESK2Q96S53 571 aa34.33■■■■□ 3.09
UBE2D2-205ENST00000505548 TMC1Q8TDI8 760 aa34.32■■■■□ 3.08
UBE2D2-205ENST00000505548 CRYBG1Q9Y4K1 1723 aa34.32■■■■□ 3.08
UBE2D2-205ENST00000505548 CDK12Q9NYV4 1490 aaPredicted RBP34.32■■■■□ 3.08
UBE2D2-205ENST00000505548 NLRP13Q86W25 1043 aa34.3■■■■□ 3.08
UBE2D2-205ENST00000505548 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.29■■■■□ 3.08
UBE2D2-205ENST00000505548 PLCH1Q4KWH8 1693 aa34.28■■■■□ 3.08
UBE2D2-205ENST00000505548 PUS7Q96PZ0 661 aaKnown RBP34.28■■■■□ 3.08
UBE2D2-205ENST00000505548 AKAP12Q02952 1782 aa34.27■■■■□ 3.08
UBE2D2-205ENST00000505548 GJD4Q96KN9 370 aaPredicted RBP34.27■■■■□ 3.08
UBE2D2-205ENST00000505548 PRDM11Q9NQV5 511 aa34.27■■■■□ 3.08
UBE2D2-205ENST00000505548 PHRF1Q9P1Y6 1649 aaKnown RBP34.26■■■■□ 3.07
UBE2D2-205ENST00000505548 NWD2Q9ULI1 1742 aa34.25■■■■□ 3.07
UBE2D2-205ENST00000505548 ZC3H6P61129 1189 aaKnown RBP34.25■■■■□ 3.07
UBE2D2-205ENST00000505548 BTG4Q9NY30 223 aa34.25■■■■□ 3.07
UBE2D2-205ENST00000505548 KTN1Q86UP2 1357 aaKnown RBP34.24■■■■□ 3.07
UBE2D2-205ENST00000505548 COL14A1Q05707 1796 aaKnown RBP34.24■■■■□ 3.07
UBE2D2-205ENST00000505548 RGS12O14924 1447 aa34.24■■■■□ 3.07
UBE2D2-205ENST00000505548 CPSF1Q10570 1443 aaKnown RBP34.24■■■■□ 3.07
UBE2D2-205ENST00000505548 SSH2Q76I76 1423 aa34.24■■■■□ 3.07
UBE2D2-205ENST00000505548 NLRP6P59044 892 aa34.24■■■■□ 3.07
UBE2D2-205ENST00000505548 SLC12A5Q9H2X9 1139 aa34.23■■■■□ 3.07
UBE2D2-205ENST00000505548 TTC21BQ7Z4L5 1316 aa34.23■■■■□ 3.07
UBE2D2-205ENST00000505548 KIAA0232Q92628 1395 aa34.23■■■■□ 3.07
UBE2D2-205ENST00000505548 TMF1P82094 1093 aa34.22■■■■□ 3.07
UBE2D2-205ENST00000505548 CCDC9Q9Y3X0 531 aaKnown RBP34.22■■■■□ 3.07
UBE2D2-205ENST00000505548 USP19O94966 1318 aa34.22■■■■□ 3.07
UBE2D2-205ENST00000505548 HDGFL2Q7Z4V5 671 aaPredicted RBP34.21■■■■□ 3.07
UBE2D2-205ENST00000505548 VPS72Q15906 364 aa34.2■■■■□ 3.07
UBE2D2-205ENST00000505548 CHRNA2Q15822 529 aa34.19■■■■□ 3.06
UBE2D2-205ENST00000505548 GCP02774 474 aa34.18■■■■□ 3.06
UBE2D2-205ENST00000505548 TERF2IPQ9NYB0 399 aa34.18■■■■□ 3.06
UBE2D2-205ENST00000505548 TTC21AQ8NDW8 1320 aa34.18■■■■□ 3.06
UBE2D2-205ENST00000505548 NRKQ7Z2Y5 1582 aa34.16■■■■□ 3.06
UBE2D2-205ENST00000505548 MON2Q7Z3U7 1717 aa34.16■■■■□ 3.06
UBE2D2-205ENST00000505548 PIK3C2AO00443 1686 aa34.15■■■■□ 3.06
UBE2D2-205ENST00000505548 CD163L1Q9NR16 1453 aa34.15■■■■□ 3.06
UBE2D2-205ENST00000505548 NRAPQ86VF7 1730 aa34.14■■■■□ 3.06
UBE2D2-205ENST00000505548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.14■■■■□ 3.06
UBE2D2-205ENST00000505548 GLI3P10071 1580 aa34.13■■■■□ 3.05
UBE2D2-205ENST00000505548 NINLQ9Y2I6 1382 aa34.12■■■■□ 3.05
UBE2D2-205ENST00000505548 CDCA8Q53HL2 280 aa34.12■■■■□ 3.05
UBE2D2-205ENST00000505548 CPDO75976 1380 aa34.11■■■■□ 3.05
UBE2D2-205ENST00000505548 A0A1W2PP64 1363 aa34.1■■■■□ 3.05
UBE2D2-205ENST00000505548 ZBTB7CA1YPR0 619 aa34.09■■■■□ 3.05
UBE2D2-205ENST00000505548 SLIT3O75094 1523 aa34.09■■■■□ 3.05
UBE2D2-205ENST00000505548 STRN4Q9NRL3 753 aa34.08■■■■□ 3.05
UBE2D2-205ENST00000505548 EVA1CP58658 441 aa34.07■■■■□ 3.04
UBE2D2-205ENST00000505548 KCNH5Q8NCM2 988 aa34.06■■■■□ 3.04
UBE2D2-205ENST00000505548 EDC4Q6P2E9 1401 aaKnown RBP34.05■■■■□ 3.04
UBE2D2-205ENST00000505548 SOX12O15370 315 aa34.05■■■■□ 3.04
UBE2D2-205ENST00000505548 EIF4G2P78344 907 aaKnown RBP eCLIP34.05■■■■□ 3.04
UBE2D2-205ENST00000505548 NME9Q86XW9 330 aa34.04■■■■□ 3.04
UBE2D2-205ENST00000505548 UPF1Q92900 1129 aaKnown RBP eCLIP34.04■■■■□ 3.04
UBE2D2-205ENST00000505548 ZRANB1Q9UGI0 708 aa34.03■■■■□ 3.04
UBE2D2-205ENST00000505548 SEPT12Q8IYM1 358 aa34.02■■■■□ 3.04
UBE2D2-205ENST00000505548 SPATA31A5Q5VU36 1347 aa34.02■■■■□ 3.04
UBE2D2-205ENST00000505548 SPATA31A7Q8IWB4 1347 aa34.02■■■■□ 3.04
UBE2D2-205ENST00000505548 A0A0G2JS52 829 aa34.01■■■■□ 3.03
UBE2D2-205ENST00000505548 MYT1Q01538 1121 aa34.01■■■■□ 3.03
UBE2D2-205ENST00000505548 CAMTA1Q9Y6Y1 1673 aa34■■■■□ 3.03
UBE2D2-205ENST00000505548 ONECUT3O60422 494 aaPredicted RBP34■■■■□ 3.03
UBE2D2-205ENST00000505548 FAM98CQ17RN3 349 aaKnown RBP34■■■■□ 3.03
UBE2D2-205ENST00000505548 USP31Q70CQ4 1352 aa33.99■■■■□ 3.03
UBE2D2-205ENST00000505548 HSPA5P11021 654 aaKnown RBP33.99■■■■□ 3.03
UBE2D2-205ENST00000505548 ANKRD36BQ8N2N9 1353 aa33.98■■■■□ 3.03
UBE2D2-205ENST00000505548 LMO7Q8WWI1 1683 aa33.98■■■■□ 3.03
UBE2D2-205ENST00000505548 AATKQ6ZMQ8 1374 aa33.96■■■■□ 3.03
UBE2D2-205ENST00000505548 ARHGEF25Q86VW2 580 aa33.95■■■■□ 3.03
UBE2D2-205ENST00000505548 USP35Q9P2H5 1018 aa33.95■■■■□ 3.03
UBE2D2-205ENST00000505548 SPATA31A1Q5TZJ5 1347 aa33.95■■■■□ 3.03
UBE2D2-205ENST00000505548 LARP1Q6PKG0 1096 aaKnown RBP33.94■■■■□ 3.02
UBE2D2-205ENST00000505548 POLR3GLQ9BT43 218 aa33.93■■■■□ 3.02
UBE2D2-205ENST00000505548 BRWD3Q6RI45 1802 aa33.93■■■■□ 3.02
UBE2D2-205ENST00000505548 USP54Q70EL1 1684 aa33.91■■■■□ 3.02
UBE2D2-205ENST00000505548 NFAT5O94916 1531 aa33.9■■■■□ 3.02
UBE2D2-205ENST00000505548 COL5A2P05997 1499 aaPredicted RBP33.9■■■■□ 3.02
UBE2D2-205ENST00000505548 KRT27Q7Z3Y8 459 aa33.89■■■■□ 3.02
UBE2D2-205ENST00000505548 AXIN2Q9Y2T1 843 aa33.88■■■■□ 3.01
UBE2D2-205ENST00000505548 COL18A1P39060 1754 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms