RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 SIN3AQ96ST3 1273 aa22.67■■□□□ 1.22
PDCD6-203ENST00000505526 ALS2Q96Q42 1657 aa22.67■■□□□ 1.22
PDCD6-203ENST00000505526 TRAK1Q9UPV9 953 aa22.66■■□□□ 1.22
PDCD6-203ENST00000505526 EN1Q05925 392 aaPredicted RBP22.66■■□□□ 1.22
PDCD6-203ENST00000505526 FAM182BQ5T319 152 aa22.66■■□□□ 1.22
PDCD6-203ENST00000505526 SPATA31A5Q5VU36 1347 aa22.65■■□□□ 1.22
PDCD6-203ENST00000505526 SPATA31A7Q8IWB4 1347 aa22.65■■□□□ 1.22
PDCD6-203ENST00000505526 MINK1Q8N4C8 1332 aaPredicted RBP22.65■■□□□ 1.22
PDCD6-203ENST00000505526 ADGRB1O14514 1584 aa22.64■■□□□ 1.22
PDCD6-203ENST00000505526 EIF3AQ14152 1382 aaKnown RBP22.64■■□□□ 1.22
PDCD6-203ENST00000505526 PRR36Q9H6K5 1346 aa22.64■■□□□ 1.22
PDCD6-203ENST00000505526 NEUROD1Q13562 356 aa22.64■■□□□ 1.21
PDCD6-203ENST00000505526 RGPD1P0DJD0 1748 aa22.63■■□□□ 1.21
PDCD6-203ENST00000505526 TULP4Q9NRJ4 1543 aa22.62■■□□□ 1.21
PDCD6-203ENST00000505526 WASLO00401 505 aaPredicted RBP22.61■■□□□ 1.21
PDCD6-203ENST00000505526 NGDNQ8NEJ9 315 aaKnown RBP22.61■■□□□ 1.21
PDCD6-203ENST00000505526 PAK3O75914 559 aaPredicted RBP22.6■■□□□ 1.21
PDCD6-203ENST00000505526 PRDM11Q9NQV5 511 aa22.6■■□□□ 1.21
PDCD6-203ENST00000505526 THSD7AQ9UPZ6 1657 aa22.6■■□□□ 1.21
PDCD6-203ENST00000505526 R3HDM1Q15032 1099 aaKnown RBP22.59■■□□□ 1.21
PDCD6-203ENST00000505526 CRYBG1Q9Y4K1 1723 aa22.59■■□□□ 1.21
PDCD6-203ENST00000505526 DISP2A7MBM2 1401 aa22.58■■□□□ 1.21
PDCD6-203ENST00000505526 KDM2AQ9Y2K7 1162 aa22.57■■□□□ 1.2
PDCD6-203ENST00000505526 TNS1Q9HBL0 1735 aaKnown RBP22.55■■□□□ 1.2
PDCD6-203ENST00000505526 EZH2Q15910 746 aaKnown RBP22.55■■□□□ 1.2
PDCD6-203ENST00000505526 SPATA31A1Q5TZJ5 1347 aa22.55■■□□□ 1.2
PDCD6-203ENST00000505526 KIAA0232Q92628 1395 aa22.54■■□□□ 1.2
PDCD6-203ENST00000505526 DCAF11Q8TEB1 546 aa22.54■■□□□ 1.2
PDCD6-203ENST00000505526 CHRNA2Q15822 529 aa22.53■■□□□ 1.2
PDCD6-203ENST00000505526 TRIM37O94972 964 aa22.52■■□□□ 1.2
PDCD6-203ENST00000505526 FAM196AQ6ZSG2 479 aa22.52■■□□□ 1.2
PDCD6-203ENST00000505526 CAMKK2Q96RR4 588 aa22.52■■□□□ 1.2
PDCD6-203ENST00000505526 STRN4Q9NRL3 753 aa22.52■■□□□ 1.2
PDCD6-203ENST00000505526 NUDT16Q96DE0 195 aaKnown RBP22.5■■□□□ 1.19
PDCD6-203ENST00000505526 TONSLQ96HA7 1378 aa22.5■■□□□ 1.19
PDCD6-203ENST00000505526 ATP7BP35670 1465 aa22.5■■□□□ 1.19
PDCD6-203ENST00000505526 ZC3H6P61129 1189 aaKnown RBP22.49■■□□□ 1.19
PDCD6-203ENST00000505526 ITSN1Q15811 1721 aa22.49■■□□□ 1.19
PDCD6-203ENST00000505526 APBA3O96018 575 aa22.48■■□□□ 1.19
PDCD6-203ENST00000505526 STAC3Q96MF2 364 aa22.48■■□□□ 1.19
PDCD6-203ENST00000505526 PHRF1Q9P1Y6 1649 aaKnown RBP22.48■■□□□ 1.19
PDCD6-203ENST00000505526 NUTM2GQ5VZR2 741 aa22.47■■□□□ 1.19
PDCD6-203ENST00000505526 USP35Q9P2H5 1018 aa22.47■■□□□ 1.19
PDCD6-203ENST00000505526 PARD3Q8TEW0 1356 aa22.46■■□□□ 1.19
PDCD6-203ENST00000505526 ARHGEF28Q8N1W1 1705 aaKnown RBP22.46■■□□□ 1.19
PDCD6-203ENST00000505526 EVA1CP58658 441 aa22.46■■□□□ 1.19
PDCD6-203ENST00000505526 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.18
PDCD6-203ENST00000505526 PDE3BQ13370 1112 aa22.44■■□□□ 1.18
PDCD6-203ENST00000505526 BARGINQ6ZT62 677 aa22.44■■□□□ 1.18
PDCD6-203ENST00000505526 CDK19Q9BWU1 502 aa22.44■■□□□ 1.18
PDCD6-203ENST00000505526 TIMELESSQ9UNS1 1208 aa22.44■■□□□ 1.18
PDCD6-203ENST00000505526 SSH2Q76I76 1423 aa22.43■■□□□ 1.18
PDCD6-203ENST00000505526 POLR3AO14802 1390 aaPredicted RBP22.43■■□□□ 1.18
PDCD6-203ENST00000505526 ACEP12821 1306 aa22.43■■□□□ 1.18
PDCD6-203ENST00000505526 NBPF8Q3BBV2 869 aa22.41■■□□□ 1.18
PDCD6-203ENST00000505526 LARP1Q6PKG0 1096 aaKnown RBP22.41■■□□□ 1.18
PDCD6-203ENST00000505526 ZEB1P37275 1124 aaPredicted RBP22.4■■□□□ 1.18
PDCD6-203ENST00000505526 CCDC61Q9Y6R9 512 aa22.4■■□□□ 1.18
PDCD6-203ENST00000505526 CAMTA1Q9Y6Y1 1673 aa22.39■■□□□ 1.17
PDCD6-203ENST00000505526 TCP11L2Q8N4U5 519 aa22.39■■□□□ 1.17
PDCD6-203ENST00000505526 ABTB2Q8N961 1025 aa22.39■■□□□ 1.17
PDCD6-203ENST00000505526 NRKQ7Z2Y5 1582 aa22.39■■□□□ 1.17
PDCD6-203ENST00000505526 TOPAZ1Q8N9V7 1692 aa22.38■■□□□ 1.17
PDCD6-203ENST00000505526 RREB1Q92766 1687 aa22.38■■□□□ 1.17
PDCD6-203ENST00000505526 PLEKHG3A1L390 1219 aa22.38■■□□□ 1.17
PDCD6-203ENST00000505526 NBPF14Q5TI25 921 aa22.38■■□□□ 1.17
PDCD6-203ENST00000505526 CPDO75976 1380 aa22.37■■□□□ 1.17
PDCD6-203ENST00000505526 NUP188Q5SRE5 1749 aa22.37■■□□□ 1.17
PDCD6-203ENST00000505526 LMO7Q8WWI1 1683 aa22.35■■□□□ 1.17
PDCD6-203ENST00000505526 USP19O94966 1318 aa22.35■■□□□ 1.17
PDCD6-203ENST00000505526 THRAP3Q9Y2W1 955 aaKnown RBP22.34■■□□□ 1.17
PDCD6-203ENST00000505526 GCP02774 474 aa22.32■■□□□ 1.16
PDCD6-203ENST00000505526 NLRP13Q86W25 1043 aa22.32■■□□□ 1.16
PDCD6-203ENST00000505526 YY1P25490 414 aa22.3■■□□□ 1.16
PDCD6-203ENST00000505526 COL5A2P05997 1499 aaPredicted RBP22.3■■□□□ 1.16
PDCD6-203ENST00000505526 SPON1Q9HCB6 807 aa22.29■■□□□ 1.16
PDCD6-203ENST00000505526 PARP4Q9UKK3 1724 aaKnown RBP22.29■■□□□ 1.16
PDCD6-203ENST00000505526 C11orf95C9JLR9 678 aaPredicted RBP22.28■■□□□ 1.16
PDCD6-203ENST00000505526 SRPK2P78362 688 aaKnown RBP22.28■■□□□ 1.16
PDCD6-203ENST00000505526 PPP1R1BQ9UD71 204 aaPredicted RBP22.28■■□□□ 1.16
PDCD6-203ENST00000505526 PPIP5K1Q6PFW1 1433 aa22.28■■□□□ 1.16
PDCD6-203ENST00000505526 KIAA1210Q9ULL0 1709 aa22.27■■□□□ 1.16
PDCD6-203ENST00000505526 KCNQ2O43526 872 aa22.27■■□□□ 1.16
PDCD6-203ENST00000505526 CRB1P82279 1406 aa22.27■■□□□ 1.16
PDCD6-203ENST00000505526 NBPF1Q3BBV0 1214 aa22.26■■□□□ 1.15
PDCD6-203ENST00000505526 OVOS2A0A0G2JMS6 1433 aa22.25■■□□□ 1.15
PDCD6-203ENST00000505526 OVOS2A0A0J9YW53 1432 aa22.25■■□□□ 1.15
PDCD6-203ENST00000505526 OVOS2Q6IE36 1432 aa22.25■■□□□ 1.15
PDCD6-203ENST00000505526 ZBTB7CA1YPR0 619 aa22.25■■□□□ 1.15
PDCD6-203ENST00000505526 CABP2Q9NPB3 220 aa22.24■■□□□ 1.15
PDCD6-203ENST00000505526 BRD4O60885 1362 aaPredicted RBP22.23■■□□□ 1.15
PDCD6-203ENST00000505526 PEAK1Q9H792 1746 aa22.23■■□□□ 1.15
PDCD6-203ENST00000505526 AATKQ6ZMQ8 1374 aa22.22■■□□□ 1.15
PDCD6-203ENST00000505526 NINLQ9Y2I6 1382 aa22.22■■□□□ 1.15
PDCD6-203ENST00000505526 CENPJQ9HC77 1338 aaPredicted RBP22.22■■□□□ 1.15
PDCD6-203ENST00000505526 DCAF8L1A6NGE4 600 aa22.22■■□□□ 1.15
PDCD6-203ENST00000505526 PLSCR1O15162 318 aa22.22■■□□□ 1.15
PDCD6-203ENST00000505526 NLRP6P59044 892 aa22.22■■□□□ 1.15
PDCD6-203ENST00000505526 DDB1Q16531 1140 aa22.22■■□□□ 1.15
PDCD6-203ENST00000505526 LRRC37A3O60309 1634 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms