RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.83□□□□□ -0.84
PROM1-206ENST00000505450 KIAA2012Q0VF49 1180 aa9.83□□□□□ -0.84
PROM1-206ENST00000505450 SLC4A10Q6U841 1118 aa9.83□□□□□ -0.84
PROM1-206ENST00000505450 ISY1Q9ULR0 285 aaKnown RBP9.83□□□□□ -0.84
PROM1-206ENST00000505450 NSD3Q9BZ95 1437 aa9.83□□□□□ -0.84
PROM1-206ENST00000505450 MINK1Q8N4C8 1332 aaPredicted RBP9.82□□□□□ -0.84
PROM1-206ENST00000505450 ADGRF5Q8IZF2 1346 aa9.82□□□□□ -0.84
PROM1-206ENST00000505450 DIAPH1O60610 1272 aaKnown RBP9.82□□□□□ -0.84
PROM1-206ENST00000505450 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
PROM1-206ENST00000505450 NUCB2P80303 420 aa9.82□□□□□ -0.84
PROM1-206ENST00000505450 THUMPD2Q9BTF0 503 aaKnown RBP9.82□□□□□ -0.84
PROM1-206ENST00000505450 CIZ1Q9ULV3 898 aaPredicted RBP9.82□□□□□ -0.84
PROM1-206ENST00000505450 TSPOAP1O95153 1857 aa9.81□□□□□ -0.84
PROM1-206ENST00000505450 CDC45O75419 566 aa9.81□□□□□ -0.84
PROM1-206ENST00000505450 TMPOP42166 694 aaKnown RBP9.81□□□□□ -0.84
PROM1-206ENST00000505450 SYTL4Q96C24 671 aaPredicted RBP9.81□□□□□ -0.84
PROM1-206ENST00000505450 A2MP01023 1474 aa9.81□□□□□ -0.84
PROM1-206ENST00000505450 GAS2L3Q86XJ1 694 aa9.81□□□□□ -0.84
PROM1-206ENST00000505450 STRN4Q9NRL3 753 aa9.81□□□□□ -0.84
PROM1-206ENST00000505450 CCDC141Q6ZP82 1450 aa9.81□□□□□ -0.84
PROM1-206ENST00000505450 TRMT2AQ8IZ69 625 aaKnown RBP9.81□□□□□ -0.84
PROM1-206ENST00000505450 EVC2Q86UK5 1308 aa9.81□□□□□ -0.84
PROM1-206ENST00000505450 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
PROM1-206ENST00000505450 HDGFL2Q7Z4V5 671 aaPredicted RBP9.8□□□□□ -0.84
PROM1-206ENST00000505450 ZNF330Q9Y3S2 320 aaPredicted RBP9.8□□□□□ -0.84
PROM1-206ENST00000505450 MAGI2Q86UL8 1455 aa9.8□□□□□ -0.84
PROM1-206ENST00000505450 FAM135AQ9P2D6 1515 aa9.8□□□□□ -0.84
PROM1-206ENST00000505450 TERF2IPQ9NYB0 399 aa9.8□□□□□ -0.84
PROM1-206ENST00000505450 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
PROM1-206ENST00000505450 ASXL1Q8IXJ9 1541 aa9.8□□□□□ -0.84
PROM1-206ENST00000505450 RAPGEF6Q8TEU7 1601 aa9.8□□□□□ -0.84
PROM1-206ENST00000505450 UQCRHLA0A096LP55 91 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 UQCRHP07919 91 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 STAC3Q96MF2 364 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 WDR7Q9Y4E6 1490 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 FSD2A1L4K1 749 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 CEP170Q5SW79 1584 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 GPRASP1Q5JY77 1395 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 BAG4O95429 457 aaKnown RBP9.79□□□□□ -0.84
PROM1-206ENST00000505450 PRKAR2BP31323 418 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 TBC1D9Q6ZT07 1266 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
PROM1-206ENST00000505450 RILPL2Q969X0 211 aa9.78□□□□□ -0.84
PROM1-206ENST00000505450 RBM27Q9P2N5 1060 aaKnown RBP9.78□□□□□ -0.84
PROM1-206ENST00000505450 PRDM10Q9NQV6 1147 aa9.78□□□□□ -0.84
PROM1-206ENST00000505450 MCCP23508 829 aa9.78□□□□□ -0.84
PROM1-206ENST00000505450 PDCL3Q9H2J4 239 aa9.78□□□□□ -0.84
PROM1-206ENST00000505450 SYCE3A1L190 88 aa9.78□□□□□ -0.84
PROM1-206ENST00000505450 NEK4P51957 841 aa9.78□□□□□ -0.84
PROM1-206ENST00000505450 PIK3C2GO75747 1445 aa9.78□□□□□ -0.84
PROM1-206ENST00000505450 SCAF11Q99590 1463 aaKnown RBP9.78□□□□□ -0.84
PROM1-206ENST00000505450 ADGRL2O95490 1459 aa9.77□□□□□ -0.85
PROM1-206ENST00000505450 SYAP1Q96A49 352 aaPredicted RBP9.77□□□□□ -0.85
PROM1-206ENST00000505450 RABEP1Q15276 862 aa9.77□□□□□ -0.85
PROM1-206ENST00000505450 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
PROM1-206ENST00000505450 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
PROM1-206ENST00000505450 ABCC2Q92887 1545 aa9.77□□□□□ -0.85
PROM1-206ENST00000505450 NUP160Q12769 1436 aa9.77□□□□□ -0.85
PROM1-206ENST00000505450 INTS3Q68E01 1043 aaKnown RBP9.77□□□□□ -0.85
PROM1-206ENST00000505450 C8orf37Q96NL8 207 aa9.77□□□□□ -0.85
PROM1-206ENST00000505450 DISP1Q96F81 1524 aa9.77□□□□□ -0.85
PROM1-206ENST00000505450 ATP10BO94823 1461 aa9.76□□□□□ -0.85
PROM1-206ENST00000505450 A0A0U1RQG5 324 aaPredicted RBP9.76□□□□□ -0.85
PROM1-206ENST00000505450 FBLN1P23142 703 aa9.76□□□□□ -0.85
PROM1-206ENST00000505450 GCC1Q96CN9 775 aa9.76□□□□□ -0.85
PROM1-206ENST00000505450 CHAF1AQ13111 956 aaPredicted RBP9.76□□□□□ -0.85
PROM1-206ENST00000505450 HDAC1Q13547 482 aaPredicted RBP9.76□□□□□ -0.85
PROM1-206ENST00000505450 INSRP06213 1382 aa9.76□□□□□ -0.85
PROM1-206ENST00000505450 ERBB4Q15303 1308 aa9.76□□□□□ -0.85
PROM1-206ENST00000505450 REC8O95072 547 aa9.76□□□□□ -0.85
PROM1-206ENST00000505450 RAB3GAP1Q15042 981 aa9.76□□□□□ -0.85
PROM1-206ENST00000505450 DRC7Q8IY82 874 aa9.76□□□□□ -0.85
PROM1-206ENST00000505450 ANO2Q9NQ90 1003 aa9.75□□□□□ -0.85
PROM1-206ENST00000505450 CSPP1Q1MSJ5 1256 aa9.75□□□□□ -0.85
PROM1-206ENST00000505450 SMC5Q8IY18 1101 aa9.75□□□□□ -0.85
PROM1-206ENST00000505450 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
PROM1-206ENST00000505450 CT47B1P0C2W7 299 aaPredicted RBP9.75□□□□□ -0.85
PROM1-206ENST00000505450 NUCB1Q02818 461 aa9.75□□□□□ -0.85
PROM1-206ENST00000505450 FOXO3O43524 673 aa9.75□□□□□ -0.85
PROM1-206ENST00000505450 SMARCA5O60264 1052 aaPredicted RBP9.75□□□□□ -0.85
PROM1-206ENST00000505450 BMP2KLQ5H9B9 411 aa9.75□□□□□ -0.85
PROM1-206ENST00000505450 API5Q9BZZ5 524 aaKnown RBP9.75□□□□□ -0.85
PROM1-206ENST00000505450 RIMBP3CA6NJZ7 1639 aa9.74□□□□□ -0.85
PROM1-206ENST00000505450 RIMBP3BA6NNM3 1639 aa9.74□□□□□ -0.85
PROM1-206ENST00000505450 RIMBP3Q9UFD9 1639 aa9.74□□□□□ -0.85
PROM1-206ENST00000505450 KLHL40Q2TBA0 621 aa9.74□□□□□ -0.85
PROM1-206ENST00000505450 TWISTNBQ3B726 338 aaPredicted RBP9.74□□□□□ -0.85
PROM1-206ENST00000505450 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
PROM1-206ENST00000505450 SNX21Q969T3 373 aa9.74□□□□□ -0.85
PROM1-206ENST00000505450 CCDC39Q9UFE4 941 aa9.74□□□□□ -0.85
PROM1-206ENST00000505450 PRIM1P49642 420 aaKnown RBP9.73□□□□□ -0.85
PROM1-206ENST00000505450 ITSN2Q9NZM3 1697 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 HMMRO75330 724 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 CD2BP2O95400 341 aaKnown RBP9.73□□□□□ -0.85
PROM1-206ENST00000505450 KCNJ4P48050 445 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 GNAI1P63096 354 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 ZSCAN23Q3MJ62 389 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 MAP7D2Q96T17 732 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 ZBTB40Q9NUA8 1239 aa9.73□□□□□ -0.85
PROM1-206ENST00000505450 POLR3AO14802 1390 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms