RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 C11orf95C9JLR9 678 aaPredicted RBP6.83□□□□□ -1.32
CPNE4-204ENST00000505331 PLSCR1O15162 318 aa6.83□□□□□ -1.32
CPNE4-204ENST00000505331 PDE3BQ13370 1112 aa6.83□□□□□ -1.32
CPNE4-204ENST00000505331 CABLES1Q8TDN4 633 aa6.83□□□□□ -1.32
CPNE4-204ENST00000505331 BCL11BQ9C0K0 894 aaPredicted RBP6.83□□□□□ -1.32
CPNE4-204ENST00000505331 RRP7BPQ9NSQ0 103 aa6.83□□□□□ -1.32
CPNE4-204ENST00000505331 CFAP65Q6ZU64 1925 aaKnown RBP6.83□□□□□ -1.32
CPNE4-204ENST00000505331 NALCNQ8IZF0 1738 aa6.82□□□□□ -1.32
CPNE4-204ENST00000505331 NWD2Q9ULI1 1742 aa6.82□□□□□ -1.32
CPNE4-204ENST00000505331 CCDC144AA2RUR9 1427 aa6.82□□□□□ -1.32
CPNE4-204ENST00000505331 CASZ1Q86V15 1759 aa6.82□□□□□ -1.32
CPNE4-204ENST00000505331 KIF3CO14782 793 aa6.81□□□□□ -1.32
CPNE4-204ENST00000505331 KRT28Q7Z3Y7 464 aa6.81□□□□□ -1.32
CPNE4-204ENST00000505331 ZNF526Q8TF50 670 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-204ENST00000505331 STK32BQ9NY57 414 aa6.81□□□□□ -1.32
CPNE4-204ENST00000505331 THSD7AQ9UPZ6 1657 aa6.81□□□□□ -1.32
CPNE4-204ENST00000505331 SPATA31A1Q5TZJ5 1347 aa6.8□□□□□ -1.32
CPNE4-204ENST00000505331 PSME1Q06323 249 aa6.8□□□□□ -1.32
CPNE4-204ENST00000505331 FAM161AQ3B820 660 aa6.8□□□□□ -1.32
CPNE4-204ENST00000505331 TNS3Q68CZ2 1445 aa6.8□□□□□ -1.32
CPNE4-204ENST00000505331 RRBP1Q9P2E9 1410 aaKnown RBP6.8□□□□□ -1.32
CPNE4-204ENST00000505331 ADCY9O60503 1353 aa6.8□□□□□ -1.32
CPNE4-204ENST00000505331 ROBO2Q9HCK4 1378 aa6.8□□□□□ -1.32
CPNE4-204ENST00000505331 HFM1A2PYH4 1435 aa6.79□□□□□ -1.32
CPNE4-204ENST00000505331 TOMM70O94826 608 aa6.79□□□□□ -1.32
CPNE4-204ENST00000505331 PLEKHG5O94827 1062 aa6.79□□□□□ -1.32
CPNE4-204ENST00000505331 SLC15A2Q16348 729 aa6.79□□□□□ -1.32
CPNE4-204ENST00000505331 PLCH1Q4KWH8 1693 aa6.79□□□□□ -1.32
CPNE4-204ENST00000505331 ARHGEF10O15013 1369 aa6.79□□□□□ -1.32
CPNE4-204ENST00000505331 YBX3P16989 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
CPNE4-204ENST00000505331 BARGINQ6ZT62 677 aa6.78□□□□□ -1.32
CPNE4-204ENST00000505331 GCC2Q8IWJ2 1684 aa6.77□□□□□ -1.32
CPNE4-204ENST00000505331 MYOM3Q5VTT5 1437 aa6.77□□□□□ -1.33
CPNE4-204ENST00000505331 TNS2Q63HR2 1409 aa6.77□□□□□ -1.33
CPNE4-204ENST00000505331 LMOD2Q6P5Q4 547 aa6.77□□□□□ -1.33
CPNE4-204ENST00000505331 KLHL34Q8N239 644 aa6.77□□□□□ -1.33
CPNE4-204ENST00000505331 PROM2Q8N271 834 aa6.77□□□□□ -1.33
CPNE4-204ENST00000505331 SBNO1A3KN83 1393 aa6.77□□□□□ -1.33
CPNE4-204ENST00000505331 CROCC2H7BZ55 1655 aa6.77□□□□□ -1.33
CPNE4-204ENST00000505331 PRAG1Q86YV5 1406 aa6.76□□□□□ -1.33
CPNE4-204ENST00000505331 NRXN3Q9Y4C0 1643 aa6.76□□□□□ -1.33
CPNE4-204ENST00000505331 HSPA1AP0DMV8 641 aaKnown RBP6.76□□□□□ -1.33
CPNE4-204ENST00000505331 HSPA1BP0DMV9 641 aaKnown RBP6.76□□□□□ -1.33
CPNE4-204ENST00000505331 POLD1P28340 1107 aa6.76□□□□□ -1.33
CPNE4-204ENST00000505331 CDC42BPGQ6DT37 1551 aa6.75□□□□□ -1.33
CPNE4-204ENST00000505331 DHX57Q6P158 1386 aaKnown RBP6.75□□□□□ -1.33
CPNE4-204ENST00000505331 NUTM2FA1L443 756 aa6.75□□□□□ -1.33
CPNE4-204ENST00000505331 NLGN2Q8NFZ4 835 aa6.75□□□□□ -1.33
CPNE4-204ENST00000505331 RBM42Q9BTD8 480 aaKnown RBP6.75□□□□□ -1.33
CPNE4-204ENST00000505331 NRAPQ86VF7 1730 aa6.75□□□□□ -1.33
CPNE4-204ENST00000505331 MYCNP04198 464 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-204ENST00000505331 HTRA3P83110 453 aa6.74□□□□□ -1.33
CPNE4-204ENST00000505331 MLLT1Q03111 559 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-204ENST00000505331 TXNRD1Q16881 649 aa6.74□□□□□ -1.33
CPNE4-204ENST00000505331 POLA2Q14181 598 aa6.73□□□□□ -1.33
CPNE4-204ENST00000505331 ZNF326Q5BKZ1 582 aaKnown RBP6.73□□□□□ -1.33
CPNE4-204ENST00000505331 SLC16A10Q8TF71 515 aa6.73□□□□□ -1.33
CPNE4-204ENST00000505331 PRDM11Q9NQV5 511 aa6.73□□□□□ -1.33
CPNE4-204ENST00000505331 STRN4Q9NRL3 753 aa6.73□□□□□ -1.33
CPNE4-204ENST00000505331 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
CPNE4-204ENST00000505331 ANKRD30AQ9BXX3 1397 aa6.72□□□□□ -1.33
CPNE4-204ENST00000505331 FSTL1Q12841 308 aa6.72□□□□□ -1.33
CPNE4-204ENST00000505331 TCP11L2Q8N4U5 519 aa6.72□□□□□ -1.33
CPNE4-204ENST00000505331 RBM46Q8TBY0 533 aaKnown RBP6.72□□□□□ -1.33
CPNE4-204ENST00000505331 PHF8Q9UPP1 1060 aa6.72□□□□□ -1.33
CPNE4-204ENST00000505331 OVOS2A0A0G2JMS6 1433 aa6.72□□□□□ -1.33
CPNE4-204ENST00000505331 OVOS2A0A0J9YW53 1432 aa6.72□□□□□ -1.33
CPNE4-204ENST00000505331 TECPR2O15040 1411 aa6.72□□□□□ -1.33
CPNE4-204ENST00000505331 NAIPQ13075 1403 aa6.72□□□□□ -1.33
CPNE4-204ENST00000505331 OVOS2Q6IE36 1432 aa6.72□□□□□ -1.33
CPNE4-204ENST00000505331 COL14A1Q05707 1796 aaKnown RBP6.72□□□□□ -1.33
CPNE4-204ENST00000505331 GOLGB1Q14789 3259 aaKnown RBP6.72□□□□□ -1.33
CPNE4-204ENST00000505331 MYO5BQ9ULV0 1848 aa6.71□□□□□ -1.33
CPNE4-204ENST00000505331 THRAP3Q9Y2W1 955 aaKnown RBP6.71□□□□□ -1.34
CPNE4-204ENST00000505331 RGPD3A6NKT7 1758 aaPredicted RBP6.71□□□□□ -1.34
CPNE4-204ENST00000505331 RGPD4Q7Z3J3 1758 aa6.71□□□□□ -1.34
CPNE4-204ENST00000505331 USP19O94966 1318 aa6.71□□□□□ -1.34
CPNE4-204ENST00000505331 RGS19P49795 217 aa6.7□□□□□ -1.34
CPNE4-204ENST00000505331 EVA1CP58658 441 aa6.7□□□□□ -1.34
CPNE4-204ENST00000505331 PMFBP1Q8TBY8 1022 aa6.7□□□□□ -1.34
CPNE4-204ENST00000505331 IQGAP3Q86VI3 1631 aa6.69□□□□□ -1.34
CPNE4-204ENST00000505331 KIF1AQ12756 1690 aa6.69□□□□□ -1.34
CPNE4-204ENST00000505331 CHRDL2Q6WN34 429 aa6.69□□□□□ -1.34
CPNE4-204ENST00000505331 PTF1AQ7RTS3 328 aa6.69□□□□□ -1.34
CPNE4-204ENST00000505331 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
CPNE4-204ENST00000505331 WDR90Q96KV7 1748 aa6.68□□□□□ -1.34
CPNE4-204ENST00000505331 VGFO15240 615 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-204ENST00000505331 C16orf71Q8IYS4 520 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-204ENST00000505331 SSH2Q76I76 1423 aa6.67□□□□□ -1.34
CPNE4-204ENST00000505331 NRXN1Q9ULB1 1477 aa6.67□□□□□ -1.34
CPNE4-204ENST00000505331 CHRNA2Q15822 529 aa6.67□□□□□ -1.34
CPNE4-204ENST00000505331 ABHD8Q96I13 439 aa6.67□□□□□ -1.34
CPNE4-204ENST00000505331 CHIC2Q9UKJ5 165 aa6.67□□□□□ -1.34
CPNE4-204ENST00000505331 KIAA0232Q92628 1395 aa6.67□□□□□ -1.34
CPNE4-204ENST00000505331 ABCA3Q99758 1704 aa6.67□□□□□ -1.34
CPNE4-204ENST00000505331 BCL9O00512 1426 aa6.67□□□□□ -1.34
CPNE4-204ENST00000505331 DAPK1P53355 1430 aa6.67□□□□□ -1.34
CPNE4-204ENST00000505331 LARP1Q6PKG0 1096 aaKnown RBP6.66□□□□□ -1.34
CPNE4-204ENST00000505331 WAPLQ7Z5K2 1190 aa6.66□□□□□ -1.34
CPNE4-204ENST00000505331 CD2APQ9Y5K6 639 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms