RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 PDZRN3Q9UPQ7 1066 aa8.16□□□□□ -1.1
LINC01088-202ENST00000505149 AP1G2O75843 785 aa8.15□□□□□ -1.1
LINC01088-202ENST00000505149 CTHP32929 405 aa8.15□□□□□ -1.1
LINC01088-202ENST00000505149 GPKOWQ92917 476 aaPredicted RBP eCLIP8.15□□□□□ -1.1
LINC01088-202ENST00000505149 ATP1B4Q9UN42 357 aaPredicted RBP8.15□□□□□ -1.1
LINC01088-202ENST00000505149 ZC3H4Q9UPT8 1303 aaKnown RBP8.14□□□□□ -1.11
LINC01088-202ENST00000505149 USP17L8P0C7I0 530 aa8.14□□□□□ -1.11
LINC01088-202ENST00000505149 SH3BP2P78314 561 aa8.14□□□□□ -1.11
LINC01088-202ENST00000505149 ZNF511Q8NB15 262 aa8.14□□□□□ -1.11
LINC01088-202ENST00000505149 GFRA3O60609 400 aa8.13□□□□□ -1.11
LINC01088-202ENST00000505149 TMEM132AQ24JP5 1023 aa8.13□□□□□ -1.11
LINC01088-202ENST00000505149 LRRN4Q8WUT4 740 aa8.13□□□□□ -1.11
LINC01088-202ENST00000505149 TOR4AQ9NXH8 423 aa8.13□□□□□ -1.11
LINC01088-202ENST00000505149 RC3H1Q5TC82 1133 aaKnown RBP8.12□□□□□ -1.11
LINC01088-202ENST00000505149 NBPF14Q5TI25 921 aa8.12□□□□□ -1.11
LINC01088-202ENST00000505149 MPNDQ8N594 471 aa8.12□□□□□ -1.11
LINC01088-202ENST00000505149 BAP1Q92560 729 aa8.12□□□□□ -1.11
LINC01088-202ENST00000505149 MRGPRX2Q96LB1 330 aa8.11□□□□□ -1.11
LINC01088-202ENST00000505149 SIAH2O43255 324 aa8.1□□□□□ -1.11
LINC01088-202ENST00000505149 VARSP26640 1264 aaKnown RBP8.1□□□□□ -1.11
LINC01088-202ENST00000505149 SH3RF1Q7Z6J0 888 aa8.1□□□□□ -1.11
LINC01088-202ENST00000505149 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
LINC01088-202ENST00000505149 HMX1Q9NP08 348 aaPredicted RBP8.1□□□□□ -1.11
LINC01088-202ENST00000505149 FKBPLQ9UIM3 349 aa8.1□□□□□ -1.11
LINC01088-202ENST00000505149 TNFRSF10AO00220 468 aa8.09□□□□□ -1.11
LINC01088-202ENST00000505149 DGAT1O75907 488 aa8.09□□□□□ -1.11
LINC01088-202ENST00000505149 FOXC1Q12948 553 aa8.09□□□□□ -1.11
LINC01088-202ENST00000505149 PDXDC2PQ6P474 469 aa8.09□□□□□ -1.11
LINC01088-202ENST00000505149 SH3BP5LQ7L8J4 393 aa8.09□□□□□ -1.11
LINC01088-202ENST00000505149 TRIM34Q9BYJ4 488 aa8.09□□□□□ -1.11
LINC01088-202ENST00000505149 GPSM3Q9Y4H4 160 aa8.09□□□□□ -1.11
LINC01088-202ENST00000505149 NR6A1Q15406 480 aa8.08□□□□□ -1.12
LINC01088-202ENST00000505149 BPHLQ86WA6 291 aaPredicted RBP8.08□□□□□ -1.12
LINC01088-202ENST00000505149 PNMA1Q8ND90 353 aa8.08□□□□□ -1.12
LINC01088-202ENST00000505149 GJD4Q96KN9 370 aaPredicted RBP8.08□□□□□ -1.12
LINC01088-202ENST00000505149 APBB1O00213 710 aa8.07□□□□□ -1.12
LINC01088-202ENST00000505149 LINC01559Q495D7 138 aa8.07□□□□□ -1.12
LINC01088-202ENST00000505149 CYP4X1Q8N118 509 aa8.07□□□□□ -1.12
LINC01088-202ENST00000505149 EHBP1Q8NDI1 1231 aa8.07□□□□□ -1.12
LINC01088-202ENST00000505149 C1QTNF2Q9BXJ5 285 aa8.07□□□□□ -1.12
LINC01088-202ENST00000505149 AVPP01185 164 aa8.06□□□□□ -1.12
LINC01088-202ENST00000505149 MTMR14Q8NCE2 650 aa8.06□□□□□ -1.12
LINC01088-202ENST00000505149 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
LINC01088-202ENST00000505149 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
LINC01088-202ENST00000505149 EPS8L1Q8TE68 723 aa8.05□□□□□ -1.12
LINC01088-202ENST00000505149 FOXJ1Q92949 421 aa8.05□□□□□ -1.12
LINC01088-202ENST00000505149 CDK15Q96Q40 435 aa8.05□□□□□ -1.12
LINC01088-202ENST00000505149 CRIPAKQ8N1N5 446 aa8.04□□□□□ -1.12
LINC01088-202ENST00000505149 FAM174AQ8TBP5 190 aa8.04□□□□□ -1.12
LINC01088-202ENST00000505149 TTC24A2A3L6 582 aaPredicted RBP8.03□□□□□ -1.12
LINC01088-202ENST00000505149 SMPD1P17405 629 aa8.03□□□□□ -1.12
LINC01088-202ENST00000505149 MAP4K5Q9Y4K4 846 aa8.03□□□□□ -1.12
LINC01088-202ENST00000505149 LCE2BO14633 110 aa8.02□□□□□ -1.13
LINC01088-202ENST00000505149 SMCPP49901 116 aaPredicted RBP8.02□□□□□ -1.13
LINC01088-202ENST00000505149 PTK2Q05397 1052 aa8.02□□□□□ -1.13
LINC01088-202ENST00000505149 PKDCCQ504Y2 493 aa8.02□□□□□ -1.13
LINC01088-202ENST00000505149 Q6ZNB5 142 aa8.02□□□□□ -1.13
LINC01088-202ENST00000505149 SNRKQ9NRH2 765 aa8.02□□□□□ -1.13
LINC01088-202ENST00000505149 FAM187AA6NFU0 413 aa8.01□□□□□ -1.13
LINC01088-202ENST00000505149 GPR37L1O60883 481 aa8.01□□□□□ -1.13
LINC01088-202ENST00000505149 CTC1Q2NKJ3 1217 aa8.01□□□□□ -1.13
LINC01088-202ENST00000505149 OCSTAMPQ9BR26 566 aa8.01□□□□□ -1.13
LINC01088-202ENST00000505149 NDUFB9Q9Y6M9 179 aa8.01□□□□□ -1.13
LINC01088-202ENST00000505149 J3QL48 77 aa8□□□□□ -1.13
LINC01088-202ENST00000505149 AGERQ15109 404 aa8□□□□□ -1.13
LINC01088-202ENST00000505149 TRAF7Q6Q0C0 670 aa8□□□□□ -1.13
LINC01088-202ENST00000505149 ARHGAP9Q9BRR9 750 aa8□□□□□ -1.13
LINC01088-202ENST00000505149 CDV3Q9UKY7 258 aaKnown RBP8□□□□□ -1.13
LINC01088-202ENST00000505149 ADH1CP00326 375 aa7.99□□□□□ -1.13
LINC01088-202ENST00000505149 ALDH1A1P00352 501 aa7.99□□□□□ -1.13
LINC01088-202ENST00000505149 MYT1Q01538 1121 aa7.99□□□□□ -1.13
LINC01088-202ENST00000505149 MCM6Q14566 821 aa7.99□□□□□ -1.13
LINC01088-202ENST00000505149 ERFEQ4G0M1 354 aa7.99□□□□□ -1.13
LINC01088-202ENST00000505149 TLL2Q9Y6L7 1015 aa7.98□□□□□ -1.13
LINC01088-202ENST00000505149 NR5A1Q13285 461 aa7.97□□□□□ -1.13
LINC01088-202ENST00000505149 PRM3Q9NNZ6 103 aa7.97□□□□□ -1.13
LINC01088-202ENST00000505149 ZBBXA8MT70 800 aa7.96□□□□□ -1.14
LINC01088-202ENST00000505149 GRM5P41594 1212 aa7.96□□□□□ -1.14
LINC01088-202ENST00000505149 FLIIQ13045 1269 aa7.96□□□□□ -1.14
LINC01088-202ENST00000505149 ZBTB33Q86T24 672 aa7.96□□□□□ -1.14
LINC01088-202ENST00000505149 ADAM32Q8TC27 787 aa7.96□□□□□ -1.14
LINC01088-202ENST00000505149 WASF2Q9Y6W5 498 aa7.96□□□□□ -1.14
LINC01088-202ENST00000505149 MAGEB6P1A0A0J9YX57 407 aa7.95□□□□□ -1.14
LINC01088-202ENST00000505149 ZNF592Q92610 1267 aa7.95□□□□□ -1.14
LINC01088-202ENST00000505149 HPS1Q92902 700 aa7.95□□□□□ -1.14
LINC01088-202ENST00000505149 AAASQ9NRG9 546 aa7.95□□□□□ -1.14
LINC01088-202ENST00000505149 MCCD1P59942 119 aaPredicted RBP7.94□□□□□ -1.14
LINC01088-202ENST00000505149 NR1H3Q13133 447 aa7.94□□□□□ -1.14
LINC01088-202ENST00000505149 SLC10A4Q96EP9 437 aa7.94□□□□□ -1.14
LINC01088-202ENST00000505149 KLF16Q9BXK1 252 aaPredicted RBP7.94□□□□□ -1.14
LINC01088-202ENST00000505149 FBXO45P0C2W1 286 aa7.93□□□□□ -1.14
LINC01088-202ENST00000505149 NNTQ13423 1086 aa7.93□□□□□ -1.14
LINC01088-202ENST00000505149 CARD14Q9BXL6 1004 aa7.93□□□□□ -1.14
LINC01088-202ENST00000505149 AXIN1O15169 862 aa7.92□□□□□ -1.14
LINC01088-202ENST00000505149 NBPF20Q3BBV1 942 aa7.92□□□□□ -1.14
LINC01088-202ENST00000505149 VASH1Q7L8A9 365 aaPredicted RBP7.92□□□□□ -1.14
LINC01088-202ENST00000505149 TBC1D2BQ9UPU7 963 aa7.92□□□□□ -1.14
LINC01088-202ENST00000505149 IRF5Q13568 498 aa7.91□□□□□ -1.14
LINC01088-202ENST00000505149 CCDC125Q86Z20 511 aa7.91□□□□□ -1.14
LINC01088-202ENST00000505149 SEPT12Q8IYM1 358 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms