RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 GTF2F1P35269 517 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDH9-202ENST00000505020 HDLBPQ00341 1268 aaKnown RBP9.33□□□□□ -0.92
CDH9-202ENST00000505020 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
CDH9-202ENST00000505020 SENP7Q9BQF6 1050 aa9.33□□□□□ -0.92
CDH9-202ENST00000505020 FBXO9Q9UK97 447 aaPredicted RBP9.33□□□□□ -0.92
CDH9-202ENST00000505020 SSFA2P28290 1259 aa9.32□□□□□ -0.92
CDH9-202ENST00000505020 CREBZFQ9NS37 354 aa9.32□□□□□ -0.92
CDH9-202ENST00000505020 BIN2Q9UBW5 565 aaPredicted RBP9.32□□□□□ -0.92
CDH9-202ENST00000505020 CCDC189A1A4V9 331 aa9.31□□□□□ -0.92
CDH9-202ENST00000505020 OSBPP22059 807 aa9.31□□□□□ -0.92
CDH9-202ENST00000505020 PPP2R2DQ66LE6 453 aa9.31□□□□□ -0.92
CDH9-202ENST00000505020 FBXO33Q7Z6M2 555 aa9.31□□□□□ -0.92
CDH9-202ENST00000505020 SCYL1Q96KG9 808 aa9.31□□□□□ -0.92
CDH9-202ENST00000505020 FARP1Q9Y4F1 1045 aaPredicted RBP9.31□□□□□ -0.92
CDH9-202ENST00000505020 UCN2Q96RP3 112 aa9.31□□□□□ -0.92
CDH9-202ENST00000505020 TMX4Q9H1E5 349 aaPredicted RBP9.31□□□□□ -0.92
CDH9-202ENST00000505020 BSDC1Q9NW68 430 aaPredicted RBP9.31□□□□□ -0.92
CDH9-202ENST00000505020 ATP2B1P20020 1258 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 SERPINB4P48594 390 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 EVA1CP58658 441 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 RAD51AP2Q09MP3 1159 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 RNF187Q5TA31 235 aaPredicted RBP9.3□□□□□ -0.92
CDH9-202ENST00000505020 CXorf38Q8TB03 319 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 TINF2Q9BSI4 451 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 TRIM34Q9BYJ4 488 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 BACH2Q9BYV9 841 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 CABP2Q9NPB3 220 aa9.3□□□□□ -0.92
CDH9-202ENST00000505020 TMEM164Q5U3C3 297 aa9.29□□□□□ -0.92
CDH9-202ENST00000505020 ZNF280DQ6N043 979 aa9.29□□□□□ -0.92
CDH9-202ENST00000505020 POTEGQ6S5H5 508 aa9.29□□□□□ -0.92
CDH9-202ENST00000505020 PMFBP1Q8TBY8 1022 aa9.29□□□□□ -0.92
CDH9-202ENST00000505020 CHMP4BQ9H444 224 aaKnown RBP9.29□□□□□ -0.92
CDH9-202ENST00000505020 ZSWIM4Q9H7M6 989 aa9.29□□□□□ -0.92
CDH9-202ENST00000505020 PCDH12Q9NPG4 1184 aa9.29□□□□□ -0.92
CDH9-202ENST00000505020 LIMD1Q9UGP4 676 aa9.29□□□□□ -0.92
CDH9-202ENST00000505020 VAC14Q08AM6 782 aa9.28□□□□□ -0.92
CDH9-202ENST00000505020 BMS1Q14692 1282 aaKnown RBP9.28□□□□□ -0.92
CDH9-202ENST00000505020 JAZF1Q86VZ6 243 aa9.28□□□□□ -0.92
CDH9-202ENST00000505020 FMNL3Q8IVF7 1028 aa9.28□□□□□ -0.92
CDH9-202ENST00000505020 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
CDH9-202ENST00000505020 SWAP70Q9UH65 585 aa9.28□□□□□ -0.92
CDH9-202ENST00000505020 STK32AQ8WU08 396 aa9.28□□□□□ -0.92
CDH9-202ENST00000505020 SPC25Q9HBM1 224 aa9.28□□□□□ -0.92
CDH9-202ENST00000505020 ARHGEF10LQ9HCE6 1279 aa9.28□□□□□ -0.92
CDH9-202ENST00000505020 DMGDHQ9UI17 866 aaKnown RBP9.28□□□□□ -0.92
CDH9-202ENST00000505020 STK10O94804 968 aaKnown RBP9.27□□□□□ -0.93
CDH9-202ENST00000505020 XPCQ01831 940 aaPredicted RBP9.27□□□□□ -0.93
CDH9-202ENST00000505020 TMC2Q8TDI7 906 aa9.27□□□□□ -0.93
CDH9-202ENST00000505020 ANP32EQ9BTT0 268 aa9.27□□□□□ -0.93
CDH9-202ENST00000505020 GABBR2O75899 941 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 S100BP04271 92 aaPredicted RBP9.26□□□□□ -0.93
CDH9-202ENST00000505020 STAG1Q8WVM7 1258 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 ZNF622Q969S3 477 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDH9-202ENST00000505020 MS4A4AQ96JQ5 239 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 ALG2Q9H553 416 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDH9-202ENST00000505020 FAM217BQ9NTX9 383 aaPredicted RBP9.26□□□□□ -0.93
CDH9-202ENST00000505020 IFT57Q9NWB7 429 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
CDH9-202ENST00000505020 CFAP69A5D8W1 941 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 CLGNO14967 610 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 LMOD3Q0VAK6 560 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 PTGDRQ13258 359 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 NRBP1Q9UHY1 535 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 ZMIZ1Q9ULJ6 1067 aa9.26□□□□□ -0.93
CDH9-202ENST00000505020 WASHC4Q2M389 1173 aa9.25□□□□□ -0.93
CDH9-202ENST00000505020 ZNF746Q6NUN9 644 aaPredicted RBP9.25□□□□□ -0.93
CDH9-202ENST00000505020 FILIP1Q7Z7B0 1213 aa9.25□□□□□ -0.93
CDH9-202ENST00000505020 QTRT2Q9H974 415 aaKnown RBP9.25□□□□□ -0.93
CDH9-202ENST00000505020 DDX56Q9NY93 547 aaKnown RBP9.25□□□□□ -0.93
CDH9-202ENST00000505020 SOCS7O14512 581 aa9.24□□□□□ -0.93
CDH9-202ENST00000505020 SCAMP3O14828 347 aaKnown RBP9.24□□□□□ -0.93
CDH9-202ENST00000505020 PRC1O43663 620 aa9.24□□□□□ -0.93
CDH9-202ENST00000505020 COPB2P35606 906 aa9.24□□□□□ -0.93
CDH9-202ENST00000505020 CCDC96Q2M329 555 aa9.24□□□□□ -0.93
CDH9-202ENST00000505020 AP1G2O75843 785 aa9.24□□□□□ -0.93
CDH9-202ENST00000505020 HSD3B2P26439 372 aa9.24□□□□□ -0.93
CDH9-202ENST00000505020 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
CDH9-202ENST00000505020 ARMC5Q96C12 935 aa9.24□□□□□ -0.93
CDH9-202ENST00000505020 ZRANB2O95218 330 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDH9-202ENST00000505020 TTC36A6NLP5 189 aa9.22□□□□□ -0.93
CDH9-202ENST00000505020 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
CDH9-202ENST00000505020 SLC43A3Q8NBI5 491 aa9.22□□□□□ -0.93
CDH9-202ENST00000505020 MAP3K20Q9NYL2 800 aaKnown RBP9.22□□□□□ -0.93
CDH9-202ENST00000505020 SLAIN2Q9P270 581 aa9.22□□□□□ -0.93
CDH9-202ENST00000505020 ZKSCAN2Q63HK3 967 aa9.21□□□□□ -0.93
CDH9-202ENST00000505020 GET4Q7L5D6 327 aaPredicted RBP9.21□□□□□ -0.93
CDH9-202ENST00000505020 SALL2Q9Y467 1007 aaPredicted RBP9.21□□□□□ -0.93
CDH9-202ENST00000505020 MRPL42Q9Y6G3 142 aaKnown RBP9.21□□□□□ -0.93
CDH9-202ENST00000505020 NDUFB9Q9Y6M9 179 aa9.21□□□□□ -0.93
CDH9-202ENST00000505020 RPGRIP1LQ68CZ1 1315 aa9.21□□□□□ -0.94
CDH9-202ENST00000505020 PITPNM1O00562 1244 aa9.21□□□□□ -0.94
CDH9-202ENST00000505020 POLD1P28340 1107 aa9.21□□□□□ -0.94
CDH9-202ENST00000505020 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
CDH9-202ENST00000505020 PRR7Q8TB68 274 aa9.21□□□□□ -0.94
CDH9-202ENST00000505020 NLRP7Q8WX94 980 aa9.21□□□□□ -0.94
CDH9-202ENST00000505020 JDP2Q8WYK2 163 aa9.21□□□□□ -0.94
CDH9-202ENST00000505020 CAPN10Q9HC96 672 aa9.21□□□□□ -0.94
CDH9-202ENST00000505020 GPHNQ9NQX3 736 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms