RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 ABTB2Q8N961 1025 aa8.36□□□□□ -1.07
SPOP-208ENST00000504889 TMC1Q8TDI8 760 aa8.36□□□□□ -1.07
SPOP-208ENST00000504889 CABP1Q9NZU7 370 aa8.36□□□□□ -1.07
SPOP-208ENST00000504889 MARF1Q9Y4F3 1742 aaKnown RBP8.35□□□□□ -1.07
SPOP-208ENST00000504889 TRPC5Q9UL62 973 aaPredicted RBP8.35□□□□□ -1.07
SPOP-208ENST00000504889 TRPM3Q9HCF6 1732 aaPredicted RBP8.34□□□□□ -1.07
SPOP-208ENST00000504889 RBM6P78332 1123 aaKnown RBP8.34□□□□□ -1.07
SPOP-208ENST00000504889 ABCA3Q99758 1704 aa8.34□□□□□ -1.07
SPOP-208ENST00000504889 ATAD2Q6PL18 1390 aa8.34□□□□□ -1.07
SPOP-208ENST00000504889 ST20-MTHFSA0A0A6YYL1 179 aa8.33□□□□□ -1.08
SPOP-208ENST00000504889 PLEKHG3A1L390 1219 aa8.33□□□□□ -1.08
SPOP-208ENST00000504889 PRDM11Q9NQV5 511 aa8.33□□□□□ -1.08
SPOP-208ENST00000504889 TIMELESSQ9UNS1 1208 aa8.33□□□□□ -1.08
SPOP-208ENST00000504889 ALS2Q96Q42 1657 aa8.33□□□□□ -1.08
SPOP-208ENST00000504889 POLR3AO14802 1390 aaPredicted RBP8.33□□□□□ -1.08
SPOP-208ENST00000504889 SOX12O15370 315 aa8.32□□□□□ -1.08
SPOP-208ENST00000504889 SLC24A1O60721 1099 aa8.32□□□□□ -1.08
SPOP-208ENST00000504889 ZC3H6P61129 1189 aaKnown RBP8.32□□□□□ -1.08
SPOP-208ENST00000504889 HDGFL2Q7Z4V5 671 aaPredicted RBP8.32□□□□□ -1.08
SPOP-208ENST00000504889 NLRP13Q86W25 1043 aa8.32□□□□□ -1.08
SPOP-208ENST00000504889 UNC5CLQ8IV45 518 aa8.32□□□□□ -1.08
SPOP-208ENST00000504889 FNBP4Q8N3X1 1017 aaPredicted RBP8.32□□□□□ -1.08
SPOP-208ENST00000504889 POLR3GLQ9BT43 218 aa8.32□□□□□ -1.08
SPOP-208ENST00000504889 BTG4Q9NY30 223 aa8.32□□□□□ -1.08
SPOP-208ENST00000504889 PLCH1Q4KWH8 1693 aa8.32□□□□□ -1.08
SPOP-208ENST00000504889 KTN1Q86UP2 1357 aaKnown RBP8.32□□□□□ -1.08
SPOP-208ENST00000504889 USP47Q96K76 1375 aa8.32□□□□□ -1.08
SPOP-208ENST00000504889 NLRP6P59044 892 aa8.31□□□□□ -1.08
SPOP-208ENST00000504889 TMF1P82094 1093 aa8.31□□□□□ -1.08
SPOP-208ENST00000504889 ZNF692Q9BU19 519 aaPredicted RBP8.31□□□□□ -1.08
SPOP-208ENST00000504889 STRN4Q9NRL3 753 aa8.31□□□□□ -1.08
SPOP-208ENST00000504889 PHRF1Q9P1Y6 1649 aaKnown RBP8.31□□□□□ -1.08
SPOP-208ENST00000504889 SBNO2Q9Y2G9 1366 aa8.31□□□□□ -1.08
SPOP-208ENST00000504889 USP6P35125 1406 aa8.3□□□□□ -1.08
SPOP-208ENST00000504889 EVA1CP58658 441 aa8.3□□□□□ -1.08
SPOP-208ENST00000504889 CHRNA2Q15822 529 aa8.3□□□□□ -1.08
SPOP-208ENST00000504889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.3□□□□□ -1.082e-6■■□□□ 12.3
SPOP-208ENST00000504889 GJD4Q96KN9 370 aaPredicted RBP8.3□□□□□ -1.08
SPOP-208ENST00000504889 TERF2IPQ9NYB0 399 aa8.3□□□□□ -1.08
SPOP-208ENST00000504889 COL14A1Q05707 1796 aaKnown RBP8.3□□□□□ -1.08
SPOP-208ENST00000504889 RGS12O14924 1447 aa8.29□□□□□ -1.08
SPOP-208ENST00000504889 ATRNO75882 1429 aa8.29□□□□□ -1.08
SPOP-208ENST00000504889 FAM83GA6ND36 823 aa8.29□□□□□ -1.08
SPOP-208ENST00000504889 BRD4O60885 1362 aaPredicted RBP8.29□□□□□ -1.08
SPOP-208ENST00000504889 KIAA0232Q92628 1395 aa8.29□□□□□ -1.08
SPOP-208ENST00000504889 BCL9LQ86UU0 1499 aa8.29□□□□□ -1.08
SPOP-208ENST00000504889 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.29□□□□□ -1.08
SPOP-208ENST00000504889 NWD2Q9ULI1 1742 aa8.29□□□□□ -1.08
SPOP-208ENST00000504889 SLIT2O94813 1529 aa8.29□□□□□ -1.08
SPOP-208ENST00000504889 CDK12Q9NYV4 1490 aaPredicted RBP8.28□□□□□ -1.08
SPOP-208ENST00000504889 CDCA8Q53HL2 280 aa8.28□□□□□ -1.08
SPOP-208ENST00000504889 USP35Q9P2H5 1018 aa8.28□□□□□ -1.08
SPOP-208ENST00000504889 TTC21BQ7Z4L5 1316 aa8.28□□□□□ -1.08
SPOP-208ENST00000504889 TTC21AQ8NDW8 1320 aa8.28□□□□□ -1.08
SPOP-208ENST00000504889 AKAP12Q02952 1782 aa8.27□□□□□ -1.08
SPOP-208ENST00000504889 NRKQ7Z2Y5 1582 aa8.27□□□□□ -1.09
SPOP-208ENST00000504889 CRYBG1Q9Y4K1 1723 aa8.27□□□□□ -1.09
SPOP-208ENST00000504889 GCP02774 474 aa8.27□□□□□ -1.09
SPOP-208ENST00000504889 VPS72Q15906 364 aa8.27□□□□□ -1.09
SPOP-208ENST00000504889 KCNH5Q8NCM2 988 aa8.27□□□□□ -1.09
SPOP-208ENST00000504889 SLC12A5Q9H2X9 1139 aa8.27□□□□□ -1.09
SPOP-208ENST00000504889 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
SPOP-208ENST00000504889 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
SPOP-208ENST00000504889 PIK3C2AO00443 1686 aa8.26□□□□□ -1.09
SPOP-208ENST00000504889 MON2Q7Z3U7 1717 aa8.26□□□□□ -1.09
SPOP-208ENST00000504889 A0A1W2PP64 1363 aa8.25□□□□□ -1.09
SPOP-208ENST00000504889 NINLQ9Y2I6 1382 aa8.25□□□□□ -1.09
SPOP-208ENST00000504889 CSB-PGBD3P0DP91 1061 aa8.25□□□□□ -1.09
SPOP-208ENST00000504889 SEPT12Q8IYM1 358 aa8.25□□□□□ -1.09
SPOP-208ENST00000504889 TESK2Q96S53 571 aa8.25□□□□□ -1.09
SPOP-208ENST00000504889 CPSF1Q10570 1443 aaKnown RBP8.25□□□□□ -1.09
SPOP-208ENST00000504889 GLI3P10071 1580 aa8.25□□□□□ -1.09
SPOP-208ENST00000504889 NRAPQ86VF7 1730 aa8.25□□□□□ -1.09
SPOP-208ENST00000504889 USP19O94966 1318 aa8.25□□□□□ -1.09
SPOP-208ENST00000504889 EDC4Q6P2E9 1401 aaKnown RBP8.24□□□□□ -1.09
SPOP-208ENST00000504889 SF3B2Q13435 895 aaKnown RBP8.24□□□□□ -1.09
SPOP-208ENST00000504889 NME9Q86XW9 330 aa8.24□□□□□ -1.09
SPOP-208ENST00000504889 PUS7Q96PZ0 661 aaKnown RBP8.24□□□□□ -1.09
SPOP-208ENST00000504889 SLIT3O75094 1523 aa8.24□□□□□ -1.09
SPOP-208ENST00000504889 HSPA5P11021 654 aaKnown RBP8.23□□□□□ -1.09
SPOP-208ENST00000504889 TOM1L2Q6ZVM7 507 aa8.23□□□□□ -1.09
SPOP-208ENST00000504889 KRT27Q7Z3Y8 459 aa8.23□□□□□ -1.09
SPOP-208ENST00000504889 UPF1Q92900 1129 aaKnown RBP eCLIP8.23□□□□□ -1.09
SPOP-208ENST00000504889 COG3Q96JB2 828 aa8.23□□□□□ -1.09
SPOP-208ENST00000504889 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
SPOP-208ENST00000504889 CPDO75976 1380 aa8.22□□□□□ -1.09
SPOP-208ENST00000504889 ANKRD36BQ8N2N9 1353 aa8.22□□□□□ -1.09
SPOP-208ENST00000504889 SSH2Q76I76 1423 aa8.22□□□□□ -1.09
SPOP-208ENST00000504889 CD163L1Q9NR16 1453 aa8.22□□□□□ -1.09
SPOP-208ENST00000504889 LARP1Q6PKG0 1096 aaKnown RBP8.22□□□□□ -1.09
SPOP-208ENST00000504889 SPATA31A5Q5VU36 1347 aa8.22□□□□□ -1.09
SPOP-208ENST00000504889 SPATA31A7Q8IWB4 1347 aa8.22□□□□□ -1.09
SPOP-208ENST00000504889 CAMTA1Q9Y6Y1 1673 aa8.21□□□□□ -1.09
SPOP-208ENST00000504889 PDE3BQ13370 1112 aa8.21□□□□□ -1.1
SPOP-208ENST00000504889 SPATA31A1Q5TZJ5 1347 aa8.21□□□□□ -1.1
SPOP-208ENST00000504889 CRB1P82279 1406 aa8.2□□□□□ -1.1
SPOP-208ENST00000504889 COL5A2P05997 1499 aaPredicted RBP8.2□□□□□ -1.1
SPOP-208ENST00000504889 TCP11L2Q8N4U5 519 aa8.2□□□□□ -1.1
SPOP-208ENST00000504889 GGNBP2Q9H3C7 697 aa8.2□□□□□ -1.1
SPOP-208ENST00000504889 LMO7Q8WWI1 1683 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms