RNA–Protein interactions for RNA: ENST00000504858.5

NECAP2-209, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-209ENST00000504858 RXRBP28702 533 aa23.77■■□□□ 1.4
NECAP2-209ENST00000504858 ATAD2Q6PL18 1390 aa23.77■■□□□ 1.4
NECAP2-209ENST00000504858 ATRNO75882 1429 aa23.76■■□□□ 1.39
NECAP2-209ENST00000504858 QTRT2Q9H974 415 aaKnown RBP23.76■■□□□ 1.39
NECAP2-209ENST00000504858 USP21Q9UK80 565 aa23.76■■□□□ 1.39
NECAP2-209ENST00000504858 NWD2Q9ULI1 1742 aa23.76■■□□□ 1.39
NECAP2-209ENST00000504858 RBM6P78332 1123 aaKnown RBP23.74■■□□□ 1.39
NECAP2-209ENST00000504858 LMOD2Q6P5Q4 547 aa23.74■■□□□ 1.39
NECAP2-209ENST00000504858 PUS7Q96PZ0 661 aaKnown RBP23.74■■□□□ 1.39
NECAP2-209ENST00000504858 TRPC5Q9UL62 973 aaPredicted RBP23.74■■□□□ 1.39
NECAP2-209ENST00000504858 SLC24A1O60721 1099 aa23.73■■□□□ 1.39
NECAP2-209ENST00000504858 CABLES1Q8TDN4 633 aa23.73■■□□□ 1.39
NECAP2-209ENST00000504858 CABP1Q9NZU7 370 aa23.72■■□□□ 1.39
NECAP2-209ENST00000504858 USP6P35125 1406 aa23.72■■□□□ 1.39
NECAP2-209ENST00000504858 SSH2Q76I76 1423 aa23.71■■□□□ 1.39
NECAP2-209ENST00000504858 AKAP12Q02952 1782 aa23.7■■□□□ 1.39
NECAP2-209ENST00000504858 PLCH1Q4KWH8 1693 aa23.7■■□□□ 1.39
NECAP2-209ENST00000504858 PAK3O75914 559 aaPredicted RBP23.7■■□□□ 1.38
NECAP2-209ENST00000504858 HAP1P54257 671 aaPredicted RBP23.7■■□□□ 1.38
NECAP2-209ENST00000504858 PHRF1Q9P1Y6 1649 aaKnown RBP23.7■■□□□ 1.38
NECAP2-209ENST00000504858 UNC5CLQ8IV45 518 aa23.69■■□□□ 1.38
NECAP2-209ENST00000504858 CPSF1Q10570 1443 aaKnown RBP23.68■■□□□ 1.38
NECAP2-209ENST00000504858 COL14A1Q05707 1796 aaKnown RBP23.68■■□□□ 1.38
NECAP2-209ENST00000504858 TESK2Q96S53 571 aa23.68■■□□□ 1.38
NECAP2-209ENST00000504858 ZNF692Q9BU19 519 aaPredicted RBP23.68■■□□□ 1.38
NECAP2-209ENST00000504858 USP19O94966 1318 aa23.66■■□□□ 1.38
NECAP2-209ENST00000504858 RGS12O14924 1447 aa23.66■■□□□ 1.38
NECAP2-209ENST00000504858 NRKQ7Z2Y5 1582 aa23.65■■□□□ 1.38
NECAP2-209ENST00000504858 NRAPQ86VF7 1730 aa23.64■■□□□ 1.38
NECAP2-209ENST00000504858 ST20-MTHFSA0A0A6YYL1 179 aa23.64■■□□□ 1.37
NECAP2-209ENST00000504858 FAM83GA6ND36 823 aa23.64■■□□□ 1.37
NECAP2-209ENST00000504858 ABTB2Q8N961 1025 aa23.64■■□□□ 1.37
NECAP2-209ENST00000504858 CCER1Q8TC90 406 aaPredicted RBP23.64■■□□□ 1.37
NECAP2-209ENST00000504858 USP47Q96K76 1375 aa23.64■■□□□ 1.37
NECAP2-209ENST00000504858 MON2Q7Z3U7 1717 aa23.63■■□□□ 1.37
NECAP2-209ENST00000504858 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
NECAP2-209ENST00000504858 NLRP13Q86W25 1043 aa23.62■■□□□ 1.37
NECAP2-209ENST00000504858 NINLQ9Y2I6 1382 aa23.62■■□□□ 1.37
NECAP2-209ENST00000504858 VPS72Q15906 364 aa23.61■■□□□ 1.37
NECAP2-209ENST00000504858 CPDO75976 1380 aa23.61■■□□□ 1.37
NECAP2-209ENST00000504858 CD163L1Q9NR16 1453 aa23.61■■□□□ 1.37
NECAP2-209ENST00000504858 GLI3P10071 1580 aa23.61■■□□□ 1.37
NECAP2-209ENST00000504858 PIK3C2AO00443 1686 aa23.6■■□□□ 1.37
NECAP2-209ENST00000504858 TTC21AQ8NDW8 1320 aa23.59■■□□□ 1.37
NECAP2-209ENST00000504858 SLIT3O75094 1523 aa23.59■■□□□ 1.37
NECAP2-209ENST00000504858 TTC21BQ7Z4L5 1316 aa23.58■■□□□ 1.36
NECAP2-209ENST00000504858 USP54Q70EL1 1684 aa23.57■■□□□ 1.36
NECAP2-209ENST00000504858 KIAA0232Q92628 1395 aa23.57■■□□□ 1.36
NECAP2-209ENST00000504858 PRDM11Q9NQV5 511 aa23.57■■□□□ 1.36
NECAP2-209ENST00000504858 KTN1Q86UP2 1357 aaKnown RBP23.56■■□□□ 1.36
NECAP2-209ENST00000504858 NUTM2GQ5VZR2 741 aa23.56■■□□□ 1.36
NECAP2-209ENST00000504858 ONECUT3O60422 494 aaPredicted RBP23.55■■□□□ 1.36
NECAP2-209ENST00000504858 PLEKHG5O94827 1062 aa23.55■■□□□ 1.36
NECAP2-209ENST00000504858 BTG4Q9NY30 223 aa23.55■■□□□ 1.36
NECAP2-209ENST00000504858 LMO7Q8WWI1 1683 aa23.54■■□□□ 1.36
NECAP2-209ENST00000504858 GCP02774 474 aa23.54■■□□□ 1.36
NECAP2-209ENST00000504858 NLRP6P59044 892 aa23.53■■□□□ 1.36
NECAP2-209ENST00000504858 EDC4Q6P2E9 1401 aaKnown RBP23.52■■□□□ 1.36
NECAP2-209ENST00000504858 TMF1P82094 1093 aa23.52■■□□□ 1.36
NECAP2-209ENST00000504858 SLC12A5Q9H2X9 1139 aa23.52■■□□□ 1.36
NECAP2-209ENST00000504858 TERF2IPQ9NYB0 399 aa23.52■■□□□ 1.36
NECAP2-209ENST00000504858 USP31Q70CQ4 1352 aa23.52■■□□□ 1.36
NECAP2-209ENST00000504858 ZC3H6P61129 1189 aaKnown RBP23.5■■□□□ 1.35
NECAP2-209ENST00000504858 HDGFL2Q7Z4V5 671 aaPredicted RBP23.5■■□□□ 1.35
NECAP2-209ENST00000504858 A0A1W2PP64 1363 aa23.5■■□□□ 1.35
NECAP2-209ENST00000504858 CDCA8Q53HL2 280 aa23.49■■□□□ 1.35
NECAP2-209ENST00000504858 UPF1Q92900 1129 aaKnown RBP eCLIP23.49■■□□□ 1.35
NECAP2-209ENST00000504858 CAMTA1Q9Y6Y1 1673 aa23.48■■□□□ 1.35
NECAP2-209ENST00000504858 TMC1Q8TDI8 760 aa23.48■■□□□ 1.35
NECAP2-209ENST00000504858 SPATA31A5Q5VU36 1347 aa23.48■■□□□ 1.35
NECAP2-209ENST00000504858 SPATA31A7Q8IWB4 1347 aa23.48■■□□□ 1.35
NECAP2-209ENST00000504858 KCNH5Q8NCM2 988 aa23.47■■□□□ 1.35
NECAP2-209ENST00000504858 AATKQ6ZMQ8 1374 aa23.47■■□□□ 1.35
NECAP2-209ENST00000504858 ABCC6O95255 1503 aa23.47■■□□□ 1.35
NECAP2-209ENST00000504858 NFAT5O94916 1531 aa23.46■■□□□ 1.35
NECAP2-209ENST00000504858 CHRNA2Q15822 529 aa23.46■■□□□ 1.35
NECAP2-209ENST00000504858 COL18A1P39060 1754 aa23.45■■□□□ 1.34
NECAP2-209ENST00000504858 ANKRD36BQ8N2N9 1353 aa23.45■■□□□ 1.34
NECAP2-209ENST00000504858 BRWD3Q6RI45 1802 aa23.44■■□□□ 1.34
NECAP2-209ENST00000504858 THSD7AQ9UPZ6 1657 aa23.44■■□□□ 1.34
NECAP2-209ENST00000504858 CCDC9Q9Y3X0 531 aaKnown RBP23.43■■□□□ 1.34
NECAP2-209ENST00000504858 COL5A2P05997 1499 aaPredicted RBP23.43■■□□□ 1.34
NECAP2-209ENST00000504858 SPATA31A1Q5TZJ5 1347 aa23.42■■□□□ 1.34
NECAP2-209ENST00000504858 ARHGEF25Q86VW2 580 aa23.42■■□□□ 1.34
NECAP2-209ENST00000504858 SEPT12Q8IYM1 358 aa23.42■■□□□ 1.34
NECAP2-209ENST00000504858 OVOS2A0A0J9YW53 1432 aa23.41■■□□□ 1.34
NECAP2-209ENST00000504858 OVOS2Q6IE36 1432 aa23.41■■□□□ 1.34
NECAP2-209ENST00000504858 MYOM1P52179 1685 aa23.4■■□□□ 1.34
NECAP2-209ENST00000504858 EIF4G2P78344 907 aaKnown RBP eCLIP23.39■■□□□ 1.33
NECAP2-209ENST00000504858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.39■■□□□ 1.33
NECAP2-209ENST00000504858 EP400Q96L91 3159 aa23.39■■□□□ 1.33
NECAP2-209ENST00000504858 NME9Q86XW9 330 aa23.38■■□□□ 1.33
NECAP2-209ENST00000504858 BARGINQ6ZT62 677 aa23.37■■□□□ 1.33
NECAP2-209ENST00000504858 EVA1CP58658 441 aa23.36■■□□□ 1.33
NECAP2-209ENST00000504858 FAM98CQ17RN3 349 aaKnown RBP23.36■■□□□ 1.33
NECAP2-209ENST00000504858 CCDC125Q86Z20 511 aa23.36■■□□□ 1.33
NECAP2-209ENST00000504858 STRN4Q9NRL3 753 aa23.36■■□□□ 1.33
NECAP2-209ENST00000504858 THRAP3Q9Y2W1 955 aaKnown RBP23.36■■□□□ 1.33
NECAP2-209ENST00000504858 CRB1P82279 1406 aa23.35■■□□□ 1.33
NECAP2-209ENST00000504858 LARP1Q6PKG0 1096 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms