RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 R3HDM1Q15032 1099 aaKnown RBP10.27□□□□□ -0.77
NPIPB3-203ENST00000504841 POGKQ9P215 609 aa10.27□□□□□ -0.77
NPIPB3-203ENST00000504841 HIRIP3Q9BW71 556 aaPredicted RBP10.26□□□□□ -0.77
NPIPB3-203ENST00000504841 C14orf93Q9H972 538 aaKnown RBP10.26□□□□□ -0.77
NPIPB3-203ENST00000504841 ANKARQ7Z5J8 1434 aa10.25□□□□□ -0.77
NPIPB3-203ENST00000504841 RGPD1P0DJD0 1748 aa10.25□□□□□ -0.77
NPIPB3-203ENST00000504841 COL14A1Q05707 1796 aaKnown RBP10.25□□□□□ -0.77
NPIPB3-203ENST00000504841 SIRT1Q96EB6 747 aa10.25□□□□□ -0.77
NPIPB3-203ENST00000504841 GPRASP1Q5JY77 1395 aa10.25□□□□□ -0.77
NPIPB3-203ENST00000504841 TRPM3Q9HCF6 1732 aaPredicted RBP10.24□□□□□ -0.77
NPIPB3-203ENST00000504841 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
NPIPB3-203ENST00000504841 MINK1Q8N4C8 1332 aaPredicted RBP10.24□□□□□ -0.77
NPIPB3-203ENST00000504841 ADGRB2O60241 1585 aa10.23□□□□□ -0.77
NPIPB3-203ENST00000504841 PRDM11Q9NQV5 511 aa10.23□□□□□ -0.77
NPIPB3-203ENST00000504841 TRAK1Q9UPV9 953 aa10.23□□□□□ -0.77
NPIPB3-203ENST00000504841 SPATA31A5Q5VU36 1347 aa10.23□□□□□ -0.77
NPIPB3-203ENST00000504841 SPATA31A7Q8IWB4 1347 aa10.23□□□□□ -0.77
NPIPB3-203ENST00000504841 ACIN1Q9UKV3 1341 aaKnown RBP10.23□□□□□ -0.77
NPIPB3-203ENST00000504841 DLC1Q96QB1 1528 aa10.23□□□□□ -0.77
NPIPB3-203ENST00000504841 ALS2Q96Q42 1657 aa10.22□□□□□ -0.77
NPIPB3-203ENST00000504841 TNS1Q9HBL0 1735 aaKnown RBP10.22□□□□□ -0.77
NPIPB3-203ENST00000504841 EZH2Q15910 746 aaKnown RBP10.22□□□□□ -0.77
NPIPB3-203ENST00000504841 STRN4Q9NRL3 753 aa10.22□□□□□ -0.77
NPIPB3-203ENST00000504841 PRR36Q9H6K5 1346 aa10.22□□□□□ -0.77
NPIPB3-203ENST00000504841 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
NPIPB3-203ENST00000504841 TRIM37O94972 964 aa10.21□□□□□ -0.77
NPIPB3-203ENST00000504841 CHRNA2Q15822 529 aa10.21□□□□□ -0.77
NPIPB3-203ENST00000504841 NGDNQ8NEJ9 315 aaKnown RBP10.21□□□□□ -0.77
NPIPB3-203ENST00000504841 EIF3AQ14152 1382 aaKnown RBP10.21□□□□□ -0.78
NPIPB3-203ENST00000504841 TULP4Q9NRJ4 1543 aa10.21□□□□□ -0.78
NPIPB3-203ENST00000504841 DISP2A7MBM2 1401 aa10.2□□□□□ -0.78
NPIPB3-203ENST00000504841 ADGRB1O14514 1584 aa10.2□□□□□ -0.78
NPIPB3-203ENST00000504841 KIAA0232Q92628 1395 aa10.2□□□□□ -0.78
NPIPB3-203ENST00000504841 USP35Q9P2H5 1018 aa10.2□□□□□ -0.78
NPIPB3-203ENST00000504841 CRYBG1Q9Y4K1 1723 aa10.19□□□□□ -0.78
NPIPB3-203ENST00000504841 APBA3O96018 575 aa10.19□□□□□ -0.78
NPIPB3-203ENST00000504841 NUTM2GQ5VZR2 741 aa10.19□□□□□ -0.78
NPIPB3-203ENST00000504841 KDM2AQ9Y2K7 1162 aa10.19□□□□□ -0.78
NPIPB3-203ENST00000504841 SPATA31A1Q5TZJ5 1347 aa10.18□□□□□ -0.78
NPIPB3-203ENST00000504841 WASLO00401 505 aaPredicted RBP10.18□□□□□ -0.78
NPIPB3-203ENST00000504841 ZC3H6P61129 1189 aaKnown RBP10.18□□□□□ -0.78
NPIPB3-203ENST00000504841 PHRF1Q9P1Y6 1649 aaKnown RBP10.18□□□□□ -0.78
NPIPB3-203ENST00000504841 FAM196AQ6ZSG2 479 aa10.17□□□□□ -0.78
NPIPB3-203ENST00000504841 CAMKK2Q96RR4 588 aa10.17□□□□□ -0.78
NPIPB3-203ENST00000504841 EVA1CP58658 441 aa10.16□□□□□ -0.78
NPIPB3-203ENST00000504841 PDE3BQ13370 1112 aa10.16□□□□□ -0.78
NPIPB3-203ENST00000504841 ATP7BP35670 1465 aa10.16□□□□□ -0.78
NPIPB3-203ENST00000504841 ITSN1Q15811 1721 aa10.16□□□□□ -0.78
NPIPB3-203ENST00000504841 YY1P25490 414 aa10.15□□□□□ -0.78
NPIPB3-203ENST00000504841 DCAF11Q8TEB1 546 aa10.15□□□□□ -0.78
NPIPB3-203ENST00000504841 PPP1R1BQ9UD71 204 aaPredicted RBP10.15□□□□□ -0.78
NPIPB3-203ENST00000504841 SSH2Q76I76 1423 aa10.15□□□□□ -0.79
NPIPB3-203ENST00000504841 PARD3Q8TEW0 1356 aa10.14□□□□□ -0.79
NPIPB3-203ENST00000504841 NUP188Q5SRE5 1749 aa10.14□□□□□ -0.79
NPIPB3-203ENST00000504841 NBPF8Q3BBV2 869 aa10.14□□□□□ -0.79
NPIPB3-203ENST00000504841 NBPF14Q5TI25 921 aa10.14□□□□□ -0.79
NPIPB3-203ENST00000504841 NUDT16Q96DE0 195 aaKnown RBP10.14□□□□□ -0.79
NPIPB3-203ENST00000504841 ARHGEF28Q8N1W1 1705 aaKnown RBP10.13□□□□□ -0.79
NPIPB3-203ENST00000504841 RREB1Q92766 1687 aa10.13□□□□□ -0.79
NPIPB3-203ENST00000504841 ZBTB7CA1YPR0 619 aa10.13□□□□□ -0.79
NPIPB3-203ENST00000504841 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
NPIPB3-203ENST00000504841 LARP1Q6PKG0 1096 aaKnown RBP10.13□□□□□ -0.79
NPIPB3-203ENST00000504841 NRKQ7Z2Y5 1582 aa10.13□□□□□ -0.79
NPIPB3-203ENST00000504841 TCP11L2Q8N4U5 519 aa10.12□□□□□ -0.79
NPIPB3-203ENST00000504841 RNF39Q9H2S5 420 aa10.12□□□□□ -0.79
NPIPB3-203ENST00000504841 RAB3GAP2Q9H2M9 1393 aa10.12□□□□□ -0.79
NPIPB3-203ENST00000504841 CAMTA1Q9Y6Y1 1673 aa10.12□□□□□ -0.79
NPIPB3-203ENST00000504841 BARGINQ6ZT62 677 aa10.11□□□□□ -0.79
NPIPB3-203ENST00000504841 CDK19Q9BWU1 502 aa10.11□□□□□ -0.79
NPIPB3-203ENST00000504841 SPON1Q9HCB6 807 aa10.11□□□□□ -0.79
NPIPB3-203ENST00000504841 ACEP12821 1306 aa10.1□□□□□ -0.79
NPIPB3-203ENST00000504841 TOPAZ1Q8N9V7 1692 aa10.1□□□□□ -0.79
NPIPB3-203ENST00000504841 ABTB2Q8N961 1025 aa10.1□□□□□ -0.79
NPIPB3-203ENST00000504841 LMO7Q8WWI1 1683 aa10.09□□□□□ -0.79
NPIPB3-203ENST00000504841 KCNQ2O43526 872 aa10.08□□□□□ -0.8
NPIPB3-203ENST00000504841 CCDC61Q9Y6R9 512 aa10.08□□□□□ -0.8
NPIPB3-203ENST00000504841 POLR3AO14802 1390 aaPredicted RBP10.08□□□□□ -0.8
NPIPB3-203ENST00000504841 CPDO75976 1380 aa10.08□□□□□ -0.8
NPIPB3-203ENST00000504841 USP19O94966 1318 aa10.07□□□□□ -0.8
NPIPB3-203ENST00000504841 COL5A2P05997 1499 aaPredicted RBP10.07□□□□□ -0.8
NPIPB3-203ENST00000504841 NINLQ9Y2I6 1382 aa10.07□□□□□ -0.8
NPIPB3-203ENST00000504841 PARP4Q9UKK3 1724 aaKnown RBP10.07□□□□□ -0.8
NPIPB3-203ENST00000504841 OVOS2A0A0G2JMS6 1433 aa10.07□□□□□ -0.8
NPIPB3-203ENST00000504841 OVOS2A0A0J9YW53 1432 aa10.07□□□□□ -0.8
NPIPB3-203ENST00000504841 OVOS2Q6IE36 1432 aa10.07□□□□□ -0.8
NPIPB3-203ENST00000504841 GCP02774 474 aa10.06□□□□□ -0.8
NPIPB3-203ENST00000504841 SRPK2P78362 688 aaKnown RBP10.06□□□□□ -0.8
NPIPB3-203ENST00000504841 NLRP13Q86W25 1043 aa10.06□□□□□ -0.8
NPIPB3-203ENST00000504841 ANO8Q9HCE9 1232 aaPredicted RBP10.06□□□□□ -0.8
NPIPB3-203ENST00000504841 THRAP3Q9Y2W1 955 aaKnown RBP10.06□□□□□ -0.8
NPIPB3-203ENST00000504841 LRRC37A3O60309 1634 aa10.06□□□□□ -0.8
NPIPB3-203ENST00000504841 CRB1P82279 1406 aa10.06□□□□□ -0.8
NPIPB3-203ENST00000504841 PPIP5K1Q6PFW1 1433 aa10.06□□□□□ -0.8
NPIPB3-203ENST00000504841 PTF1AQ7RTS3 328 aa10.05□□□□□ -0.8
NPIPB3-203ENST00000504841 BCL11BQ9C0K0 894 aaPredicted RBP10.05□□□□□ -0.8
NPIPB3-203ENST00000504841 PEAK1Q9H792 1746 aa10.04□□□□□ -0.8
NPIPB3-203ENST00000504841 PLEKHG3A1L390 1219 aa10.04□□□□□ -0.8
NPIPB3-203ENST00000504841 ZBTB7AO95365 584 aa10.04□□□□□ -0.8
NPIPB3-203ENST00000504841 DDB1Q16531 1140 aa10.04□□□□□ -0.8
NPIPB3-203ENST00000504841 TOM1L2Q6ZVM7 507 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms