RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 LAMC1P11047 1609 aa13.01□□□□□ -0.33
CDH6-202ENST00000504835 PPLO60437 1756 aa13.01□□□□□ -0.33
CDH6-202ENST00000504835 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
CDH6-202ENST00000504835 ADGRL3Q9HAR2 1447 aa13□□□□□ -0.33
CDH6-202ENST00000504835 PDCD7Q8N8D1 485 aaKnown RBP13□□□□□ -0.33
CDH6-202ENST00000504835 MEX3CQ5U5Q3 659 aaKnown RBP12.99□□□□□ -0.33
CDH6-202ENST00000504835 NAIPQ13075 1403 aa12.99□□□□□ -0.33
CDH6-202ENST00000504835 ZNF326Q5BKZ1 582 aaKnown RBP12.98□□□□□ -0.33
CDH6-202ENST00000504835 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
CDH6-202ENST00000504835 ZNF772Q68DY9 489 aaPredicted RBP12.98□□□□□ -0.33
CDH6-202ENST00000504835 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
CDH6-202ENST00000504835 NUTM2BA6NNL0 878 aaPredicted RBP12.97□□□□□ -0.33
CDH6-202ENST00000504835 NUTM2EB1AL46 878 aaPredicted RBP12.97□□□□□ -0.33
CDH6-202ENST00000504835 NUTM2AQ8IVF1 878 aaPredicted RBP12.97□□□□□ -0.33
CDH6-202ENST00000504835 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
CDH6-202ENST00000504835 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
CDH6-202ENST00000504835 EMP3P54852 163 aa12.96□□□□□ -0.33
CDH6-202ENST00000504835 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDH6-202ENST00000504835 CDK12Q9NYV4 1490 aaPredicted RBP12.96□□□□□ -0.33
CDH6-202ENST00000504835 PNPLA6Q8IY17 1366 aa12.96□□□□□ -0.34
CDH6-202ENST00000504835 AFF2P51816 1311 aa12.95□□□□□ -0.34
CDH6-202ENST00000504835 C1orf167Q5SNV9 1468 aa12.95□□□□□ -0.34
CDH6-202ENST00000504835 PTCH1Q13635 1447 aa12.94□□□□□ -0.34
CDH6-202ENST00000504835 IFT172Q9UG01 1749 aa12.94□□□□□ -0.34
CDH6-202ENST00000504835 PRAG1Q86YV5 1406 aa12.94□□□□□ -0.34
CDH6-202ENST00000504835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDH6-202ENST00000504835 MARF1Q9Y4F3 1742 aaKnown RBP12.94□□□□□ -0.34
CDH6-202ENST00000504835 ROBO2Q9HCK4 1378 aa12.93□□□□□ -0.34
CDH6-202ENST00000504835 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
CDH6-202ENST00000504835 RXRBP28702 533 aa12.93□□□□□ -0.34
CDH6-202ENST00000504835 COL22A1Q8NFW1 1626 aaPredicted RBP12.93□□□□□ -0.34
CDH6-202ENST00000504835 RGS12O14924 1447 aa12.92□□□□□ -0.34
CDH6-202ENST00000504835 LRRC59Q96AG4 307 aaKnown RBP12.92□□□□□ -0.34
CDH6-202ENST00000504835 HFM1A2PYH4 1435 aa12.9□□□□□ -0.34
CDH6-202ENST00000504835 PSEN1P49768 467 aa12.9□□□□□ -0.35
CDH6-202ENST00000504835 CDC42BPGQ6DT37 1551 aa12.89□□□□□ -0.35
CDH6-202ENST00000504835 KNDC1Q76NI1 1749 aa12.89□□□□□ -0.35
CDH6-202ENST00000504835 C8orf37Q96NL8 207 aa12.89□□□□□ -0.35
CDH6-202ENST00000504835 ORAI2Q96SN7 254 aa12.89□□□□□ -0.35
CDH6-202ENST00000504835 EP400Q96L91 3159 aa12.89□□□□□ -0.35
CDH6-202ENST00000504835 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
CDH6-202ENST00000504835 VASPP50552 380 aaPredicted RBP12.88□□□□□ -0.35
CDH6-202ENST00000504835 RGPD8O14715 1765 aaPredicted RBP12.87□□□□□ -0.35
CDH6-202ENST00000504835 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
CDH6-202ENST00000504835 QTRT2Q9H974 415 aaKnown RBP12.86□□□□□ -0.35
CDH6-202ENST00000504835 RBM6P78332 1123 aaKnown RBP12.86□□□□□ -0.35
CDH6-202ENST00000504835 PXDNQ92626 1479 aa12.85□□□□□ -0.35
CDH6-202ENST00000504835 RPGRIP1LQ68CZ1 1315 aa12.85□□□□□ -0.35
CDH6-202ENST00000504835 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
CDH6-202ENST00000504835 G3V3G9 751 aa12.85□□□□□ -0.35
CDH6-202ENST00000504835 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
CDH6-202ENST00000504835 HS3ST6Q96QI5 342 aa12.85□□□□□ -0.35
CDH6-202ENST00000504835 MYOM2P54296 1465 aa12.84□□□□□ -0.35
CDH6-202ENST00000504835 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
CDH6-202ENST00000504835 PDAP1Q13442 181 aaKnown RBP12.83□□□□□ -0.36
CDH6-202ENST00000504835 ADGRF5Q8IZF2 1346 aa12.83□□□□□ -0.36
CDH6-202ENST00000504835 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.83□□□□□ -0.36
CDH6-202ENST00000504835 SPATA31E1Q6ZUB1 1445 aa12.83□□□□□ -0.36
CDH6-202ENST00000504835 SRCAPQ6ZRS2 3230 aa12.82□□□□□ -0.36
CDH6-202ENST00000504835 NGLY1Q96IV0 654 aa12.82□□□□□ -0.36
CDH6-202ENST00000504835 TECPR2O15040 1411 aa12.82□□□□□ -0.36
CDH6-202ENST00000504835 ATRNO75882 1429 aa12.82□□□□□ -0.36
CDH6-202ENST00000504835 BRWD3Q6RI45 1802 aa12.81□□□□□ -0.36
CDH6-202ENST00000504835 KIF1AQ12756 1690 aa12.8□□□□□ -0.36
CDH6-202ENST00000504835 FNBP4Q8N3X1 1017 aaPredicted RBP12.8□□□□□ -0.36
CDH6-202ENST00000504835 USP21Q9UK80 565 aa12.8□□□□□ -0.36
CDH6-202ENST00000504835 PLEKHH1Q9ULM0 1364 aa12.8□□□□□ -0.36
CDH6-202ENST00000504835 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
CDH6-202ENST00000504835 BCL9LQ86UU0 1499 aa12.79□□□□□ -0.36
CDH6-202ENST00000504835 PIK3C2GO75747 1445 aa12.78□□□□□ -0.36
CDH6-202ENST00000504835 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
CDH6-202ENST00000504835 WAPLQ7Z5K2 1190 aa12.78□□□□□ -0.36
CDH6-202ENST00000504835 KRTAP3-3Q9BYR6 98 aa12.78□□□□□ -0.36
CDH6-202ENST00000504835 KRTAP3-2Q9BYR7 98 aa12.78□□□□□ -0.36
CDH6-202ENST00000504835 CCDC144AA2RUR9 1427 aa12.78□□□□□ -0.36
CDH6-202ENST00000504835 NPHP3Q7Z494 1330 aa12.78□□□□□ -0.36
CDH6-202ENST00000504835 XPCQ01831 940 aaPredicted RBP12.77□□□□□ -0.36
CDH6-202ENST00000504835 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.36
CDH6-202ENST00000504835 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.36
CDH6-202ENST00000504835 GLI3P10071 1580 aa12.77□□□□□ -0.36
CDH6-202ENST00000504835 USP32Q8NFA0 1604 aa12.77□□□□□ -0.37
CDH6-202ENST00000504835 STK26Q9P289 416 aa12.77□□□□□ -0.37
CDH6-202ENST00000504835 PLCH1Q4KWH8 1693 aa12.76□□□□□ -0.37
CDH6-202ENST00000504835 ATAD2Q6PL18 1390 aa12.76□□□□□ -0.37
CDH6-202ENST00000504835 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
CDH6-202ENST00000504835 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
CDH6-202ENST00000504835 FOXO3O43524 673 aa12.76□□□□□ -0.37
CDH6-202ENST00000504835 RGL3Q3MIN7 710 aa12.76□□□□□ -0.37
CDH6-202ENST00000504835 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
CDH6-202ENST00000504835 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
CDH6-202ENST00000504835 ANKRD30BQ9BXX2 1392 aa12.75□□□□□ -0.37
CDH6-202ENST00000504835 YTHDC2Q9H6S0 1430 aaKnown RBP12.75□□□□□ -0.37
CDH6-202ENST00000504835 NRXN1Q9ULB1 1477 aa12.74□□□□□ -0.37
CDH6-202ENST00000504835 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
CDH6-202ENST00000504835 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
CDH6-202ENST00000504835 MPHOSPH9Q99550 1183 aa12.74□□□□□ -0.37
CDH6-202ENST00000504835 CABP2Q9NPB3 220 aa12.74□□□□□ -0.37
CDH6-202ENST00000504835 SLIT2O94813 1529 aa12.74□□□□□ -0.37
CDH6-202ENST00000504835 NWD2Q9ULI1 1742 aa12.73□□□□□ -0.37
CDH6-202ENST00000504835 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms