RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 PNMA1Q8ND90 353 aa10.91□□□□□ -0.66
TRAPPC13-206ENST00000504751 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.66
TRAPPC13-206ENST00000504751 ZC3H4Q9UPT8 1303 aaKnown RBP10.89□□□□□ -0.67
TRAPPC13-206ENST00000504751 WASHC4Q2M389 1173 aa10.89□□□□□ -0.67
TRAPPC13-206ENST00000504751 FCF1Q9Y324 198 aaKnown RBP10.89□□□□□ -0.67
TRAPPC13-206ENST00000504751 VAC14Q08AM6 782 aa10.88□□□□□ -0.67
TRAPPC13-206ENST00000504751 PTCRAQ6ISU1 281 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC13-206ENST00000504751 CCDC24Q8N4L8 307 aa10.87□□□□□ -0.67
TRAPPC13-206ENST00000504751 UNC93B1Q9H1C4 597 aa10.87□□□□□ -0.67
TRAPPC13-206ENST00000504751 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
TRAPPC13-206ENST00000504751 ADAMTS19Q8TE59 1207 aa10.86□□□□□ -0.67
TRAPPC13-206ENST00000504751 FBXO45P0C2W1 286 aa10.85□□□□□ -0.67
TRAPPC13-206ENST00000504751 ARMC2Q8NEN0 867 aa10.85□□□□□ -0.67
TRAPPC13-206ENST00000504751 GLMNQ92990 594 aa10.85□□□□□ -0.67
TRAPPC13-206ENST00000504751 RNF223E7ERA6 249 aa10.84□□□□□ -0.67
TRAPPC13-206ENST00000504751 NBPF14Q5TI25 921 aa10.84□□□□□ -0.67
TRAPPC13-206ENST00000504751 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.67
TRAPPC13-206ENST00000504751 ZBBXA8MT70 800 aa10.83□□□□□ -0.68
TRAPPC13-206ENST00000504751 PPEF1O14829 653 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC13-206ENST00000504751 NR1H3Q13133 447 aa10.83□□□□□ -0.68
TRAPPC13-206ENST00000504751 OCSTAMPQ9BR26 566 aa10.83□□□□□ -0.68
TRAPPC13-206ENST00000504751 GPSM3Q9Y4H4 160 aa10.82□□□□□ -0.68
TRAPPC13-206ENST00000504751 PLA2G2CQ5R387 149 aa10.81□□□□□ -0.68
TRAPPC13-206ENST00000504751 PDXDC2PQ6P474 469 aa10.81□□□□□ -0.68
TRAPPC13-206ENST00000504751 ANKLE1Q8NAG6 615 aa10.81□□□□□ -0.68
TRAPPC13-206ENST00000504751 GGCXP38435 758 aa10.8□□□□□ -0.68
TRAPPC13-206ENST00000504751 SH3BP5LQ7L8J4 393 aa10.8□□□□□ -0.68
TRAPPC13-206ENST00000504751 CALR3Q96L12 384 aaKnown RBP10.8□□□□□ -0.68
TRAPPC13-206ENST00000504751 ARID3AQ99856 593 aa10.8□□□□□ -0.68
TRAPPC13-206ENST00000504751 ALG2Q9H553 416 aa10.8□□□□□ -0.68
TRAPPC13-206ENST00000504751 SOX11P35716 441 aa10.79□□□□□ -0.68
TRAPPC13-206ENST00000504751 HDGFL1Q5TGJ6 251 aa10.79□□□□□ -0.68
TRAPPC13-206ENST00000504751 PPP1R18Q6NYC8 613 aa10.79□□□□□ -0.68
TRAPPC13-206ENST00000504751 PTK2Q05397 1052 aa10.78□□□□□ -0.68
TRAPPC13-206ENST00000504751 IFFO2Q5TF58 517 aa10.78□□□□□ -0.68
TRAPPC13-206ENST00000504751 SERPINA10Q9UK55 444 aa10.78□□□□□ -0.68
TRAPPC13-206ENST00000504751 ZNF511Q8NB15 262 aa10.77□□□□□ -0.69
TRAPPC13-206ENST00000504751 BAP1Q92560 729 aa10.77□□□□□ -0.69
TRAPPC13-206ENST00000504751 CCDC97Q96F63 343 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC13-206ENST00000504751 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.77□□□□□ -0.69
TRAPPC13-206ENST00000504751 EIF4G2P78344 907 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAPPC13-206ENST00000504751 LINC01559Q495D7 138 aa10.76□□□□□ -0.69
TRAPPC13-206ENST00000504751 SH3RF1Q7Z6J0 888 aa10.76□□□□□ -0.69
TRAPPC13-206ENST00000504751 TRIM32Q13049 653 aa10.75□□□□□ -0.69
TRAPPC13-206ENST00000504751 ARHGAP9Q9BRR9 750 aa10.75□□□□□ -0.69
TRAPPC13-206ENST00000504751 ADAM32Q8TC27 787 aa10.74□□□□□ -0.69
TRAPPC13-206ENST00000504751 UCN2Q96RP3 112 aa10.74□□□□□ -0.69
TRAPPC13-206ENST00000504751 SEMA3FQ13275 785 aa10.73□□□□□ -0.69
TRAPPC13-206ENST00000504751 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
TRAPPC13-206ENST00000504751 FOXJ1Q92949 421 aa10.73□□□□□ -0.69
TRAPPC13-206ENST00000504751 SH3BP2P78314 561 aa10.72□□□□□ -0.69
TRAPPC13-206ENST00000504751 EMID1Q96A84 441 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC13-206ENST00000504751 ARXQ96QS3 562 aa10.72□□□□□ -0.69
TRAPPC13-206ENST00000504751 BPHLQ86WA6 291 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC13-206ENST00000504751 CARD14Q9BXL6 1004 aa10.71□□□□□ -0.69
TRAPPC13-206ENST00000504751 MAGEB6P1A0A0J9YX57 407 aa10.7□□□□□ -0.7
TRAPPC13-206ENST00000504751 ZBTB24O43167 697 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC13-206ENST00000504751 RPIAP49247 311 aa10.7□□□□□ -0.7
TRAPPC13-206ENST00000504751 C1QTNF2Q9BXJ5 285 aa10.7□□□□□ -0.7
TRAPPC13-206ENST00000504751 SKOR1P84550 965 aa10.69□□□□□ -0.7
TRAPPC13-206ENST00000504751 ERFEQ4G0M1 354 aa10.69□□□□□ -0.7
TRAPPC13-206ENST00000504751 PCDHB9Q9Y5E1 797 aa10.69□□□□□ -0.7
TRAPPC13-206ENST00000504751 WNT7BP56706 349 aa10.68□□□□□ -0.7
TRAPPC13-206ENST00000504751 ZBTB33Q86T24 672 aa10.68□□□□□ -0.7
TRAPPC13-206ENST00000504751 PPP1R12CQ9BZL4 782 aa10.68□□□□□ -0.7
TRAPPC13-206ENST00000504751 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
TRAPPC13-206ENST00000504751 AGERQ15109 404 aa10.67□□□□□ -0.7
TRAPPC13-206ENST00000504751 CFAP70Q5T0N1 1121 aa10.67□□□□□ -0.7
TRAPPC13-206ENST00000504751 LIAT1Q6ZQX7 453 aa10.67□□□□□ -0.7
TRAPPC13-206ENST00000504751 ZNF592Q92610 1267 aa10.67□□□□□ -0.7
TRAPPC13-206ENST00000504751 A0A0G2JS52 829 aa10.66□□□□□ -0.7
TRAPPC13-206ENST00000504751 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC13-206ENST00000504751 PIK3CDO00329 1044 aa10.66□□□□□ -0.7
TRAPPC13-206ENST00000504751 MCCD1P59942 119 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC13-206ENST00000504751 TRMT44Q8IYL2 757 aaKnown RBP10.65□□□□□ -0.7
TRAPPC13-206ENST00000504751 TBC1D9Q6ZT07 1266 aa10.64□□□□□ -0.71
TRAPPC13-206ENST00000504751 NFATC2IPQ8NCF5 419 aa10.64□□□□□ -0.71
TRAPPC13-206ENST00000504751 FAM174AQ8TBP5 190 aa10.64□□□□□ -0.71
TRAPPC13-206ENST00000504751 CEP126Q9P2H0 1117 aa10.64□□□□□ -0.71
TRAPPC13-206ENST00000504751 DZIP3Q86Y13 1208 aaKnown RBP10.63□□□□□ -0.71
TRAPPC13-206ENST00000504751 SLC10A4Q96EP9 437 aa10.63□□□□□ -0.71
TRAPPC13-206ENST00000504751 TFIP11Q9UBB9 837 aaKnown RBP10.63□□□□□ -0.71
TRAPPC13-206ENST00000504751 MAFBQ9Y5Q3 323 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC13-206ENST00000504751 ATP9BO43861 1147 aa10.62□□□□□ -0.71
TRAPPC13-206ENST00000504751 CD2BP2O95400 341 aaKnown RBP10.62□□□□□ -0.71
TRAPPC13-206ENST00000504751 HOMEZQ8IX15 550 aa10.62□□□□□ -0.71
TRAPPC13-206ENST00000504751 PHTF2Q8N3S3 785 aa10.62□□□□□ -0.71
TRAPPC13-206ENST00000504751 VARSP26640 1264 aaKnown RBP10.61□□□□□ -0.71
TRAPPC13-206ENST00000504751 SLC19A1P41440 591 aa10.61□□□□□ -0.71
TRAPPC13-206ENST00000504751 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
TRAPPC13-206ENST00000504751 SRPK2P78362 688 aaKnown RBP10.59□□□□□ -0.71
TRAPPC13-206ENST00000504751 NBPF20Q3BBV1 942 aa10.59□□□□□ -0.71
TRAPPC13-206ENST00000504751 SLFNL1Q499Z3 407 aa10.59□□□□□ -0.71
TRAPPC13-206ENST00000504751 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
TRAPPC13-206ENST00000504751 EHBP1Q8NDI1 1231 aa10.59□□□□□ -0.71
TRAPPC13-206ENST00000504751 USP17L5A8MUK1 530 aa10.58□□□□□ -0.72
TRAPPC13-206ENST00000504751 ESPNB1AK53 854 aa10.58□□□□□ -0.72
TRAPPC13-206ENST00000504751 LMOD1P29536 600 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC13-206ENST00000504751 RNF135Q8IUD6 432 aa10.58□□□□□ -0.72
TRAPPC13-206ENST00000504751 PBXIP1Q96AQ6 731 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms