RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 FMN2Q9NZ56 1722 aa13.56□□□□□ -0.24
PDGFC-204ENST00000504672 DISP2A7MBM2 1401 aa13.56□□□□□ -0.24
PDGFC-204ENST00000504672 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
PDGFC-204ENST00000504672 ZC3H6P61129 1189 aaKnown RBP13.55□□□□□ -0.24
PDGFC-204ENST00000504672 PDE3BQ13370 1112 aa13.55□□□□□ -0.24
PDGFC-204ENST00000504672 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
PDGFC-204ENST00000504672 ANKRD30BQ9BXX2 1392 aa13.55□□□□□ -0.24
PDGFC-204ENST00000504672 NWD2Q9ULI1 1742 aa13.54□□□□□ -0.24
PDGFC-204ENST00000504672 PPLO60437 1756 aa13.54□□□□□ -0.24
PDGFC-204ENST00000504672 EVA1CP58658 441 aa13.54□□□□□ -0.24
PDGFC-204ENST00000504672 NGDNQ8NEJ9 315 aaKnown RBP13.54□□□□□ -0.24
PDGFC-204ENST00000504672 GPRASP1Q5JY77 1395 aa13.54□□□□□ -0.24
PDGFC-204ENST00000504672 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
PDGFC-204ENST00000504672 ACIN1Q9UKV3 1341 aaKnown RBP13.53□□□□□ -0.24
PDGFC-204ENST00000504672 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
PDGFC-204ENST00000504672 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.25
PDGFC-204ENST00000504672 PRR36Q9H6K5 1346 aa13.52□□□□□ -0.25
PDGFC-204ENST00000504672 KIAA0232Q92628 1395 aa13.52□□□□□ -0.25
PDGFC-204ENST00000504672 SPATA31E1Q6ZUB1 1445 aa13.52□□□□□ -0.25
PDGFC-204ENST00000504672 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
PDGFC-204ENST00000504672 PIK3C2GO75747 1445 aa13.51□□□□□ -0.25
PDGFC-204ENST00000504672 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
PDGFC-204ENST00000504672 PDGFDQ9GZP0 370 aaPredicted RBP13.51□□□□□ -0.25
PDGFC-204ENST00000504672 TRAK1Q9UPV9 953 aa13.51□□□□□ -0.25
PDGFC-204ENST00000504672 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
PDGFC-204ENST00000504672 LARP1Q6PKG0 1096 aaKnown RBP13.5□□□□□ -0.25
PDGFC-204ENST00000504672 MPHOSPH9Q99550 1183 aa13.5□□□□□ -0.25
PDGFC-204ENST00000504672 NRAPQ86VF7 1730 aa13.5□□□□□ -0.25
PDGFC-204ENST00000504672 PARD3Q8TEW0 1356 aa13.49□□□□□ -0.25
PDGFC-204ENST00000504672 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
PDGFC-204ENST00000504672 ZBTB7AO95365 584 aa13.48□□□□□ -0.25
PDGFC-204ENST00000504672 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
PDGFC-204ENST00000504672 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
PDGFC-204ENST00000504672 TNS1Q9HBL0 1735 aaKnown RBP13.47□□□□□ -0.25
PDGFC-204ENST00000504672 WASLO00401 505 aaPredicted RBP13.47□□□□□ -0.25
PDGFC-204ENST00000504672 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
PDGFC-204ENST00000504672 COL14A1Q05707 1796 aaKnown RBP13.47□□□□□ -0.25
PDGFC-204ENST00000504672 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
PDGFC-204ENST00000504672 BARGINQ6ZT62 677 aa13.46□□□□□ -0.25
PDGFC-204ENST00000504672 TCP11L2Q8N4U5 519 aa13.46□□□□□ -0.25
PDGFC-204ENST00000504672 ANKARQ7Z5J8 1434 aa13.46□□□□□ -0.26
PDGFC-204ENST00000504672 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
PDGFC-204ENST00000504672 ANO8Q9HCE9 1232 aaPredicted RBP13.45□□□□□ -0.26
PDGFC-204ENST00000504672 UTRNP46939 3433 aa13.44□□□□□ -0.26
PDGFC-204ENST00000504672 ZBTB7CA1YPR0 619 aa13.43□□□□□ -0.26
PDGFC-204ENST00000504672 ADGRB2O60241 1585 aa13.43□□□□□ -0.26
PDGFC-204ENST00000504672 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
PDGFC-204ENST00000504672 NUDT16Q96DE0 195 aaKnown RBP13.43□□□□□ -0.26
PDGFC-204ENST00000504672 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
PDGFC-204ENST00000504672 IFT172Q9UG01 1749 aa13.43□□□□□ -0.26
PDGFC-204ENST00000504672 KDM2AQ9Y2K7 1162 aa13.43□□□□□ -0.26
PDGFC-204ENST00000504672 PTGER2P43116 358 aa13.42□□□□□ -0.26
PDGFC-204ENST00000504672 C1QTNF8P60827 252 aa13.42□□□□□ -0.26
PDGFC-204ENST00000504672 PROM2Q8N271 834 aa13.42□□□□□ -0.26
PDGFC-204ENST00000504672 TRPM3Q9HCF6 1732 aaPredicted RBP13.42□□□□□ -0.26
PDGFC-204ENST00000504672 CAMTA1Q9Y6Y1 1673 aa13.41□□□□□ -0.26
PDGFC-204ENST00000504672 SSH2Q76I76 1423 aa13.41□□□□□ -0.26
PDGFC-204ENST00000504672 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
PDGFC-204ENST00000504672 FHDC1Q9C0D6 1143 aaPredicted RBP13.41□□□□□ -0.26
PDGFC-204ENST00000504672 ADRA2BP18089 450 aa13.4□□□□□ -0.26
PDGFC-204ENST00000504672 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
PDGFC-204ENST00000504672 SYT17Q9BSW7 474 aa13.4□□□□□ -0.26
PDGFC-204ENST00000504672 ALS2Q96Q42 1657 aa13.4□□□□□ -0.26
PDGFC-204ENST00000504672 PLSCR1O15162 318 aa13.39□□□□□ -0.27
PDGFC-204ENST00000504672 CDK19Q9BWU1 502 aa13.39□□□□□ -0.27
PDGFC-204ENST00000504672 NUP188Q5SRE5 1749 aa13.38□□□□□ -0.27
PDGFC-204ENST00000504672 ACEP12821 1306 aa13.38□□□□□ -0.27
PDGFC-204ENST00000504672 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
PDGFC-204ENST00000504672 EIF3AQ14152 1382 aaKnown RBP13.36□□□□□ -0.27
PDGFC-204ENST00000504672 GCP02774 474 aa13.36□□□□□ -0.27
PDGFC-204ENST00000504672 DDB1Q16531 1140 aa13.36□□□□□ -0.27
PDGFC-204ENST00000504672 RREB1Q92766 1687 aa13.36□□□□□ -0.27
PDGFC-204ENST00000504672 TULP4Q9NRJ4 1543 aa13.35□□□□□ -0.27
PDGFC-204ENST00000504672 MARCH10Q8NA82 808 aaPredicted RBP13.35□□□□□ -0.27
PDGFC-204ENST00000504672 DCAF11Q8TEB1 546 aa13.35□□□□□ -0.27
PDGFC-204ENST00000504672 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
PDGFC-204ENST00000504672 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
PDGFC-204ENST00000504672 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
PDGFC-204ENST00000504672 CEP350Q5VT06 3117 aa13.33□□□□□ -0.27
PDGFC-204ENST00000504672 NRKQ7Z2Y5 1582 aa13.33□□□□□ -0.28
PDGFC-204ENST00000504672 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
PDGFC-204ENST00000504672 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
PDGFC-204ENST00000504672 C11orf95C9JLR9 678 aaPredicted RBP13.32□□□□□ -0.28
PDGFC-204ENST00000504672 GPR162Q16538 588 aa13.32□□□□□ -0.28
PDGFC-204ENST00000504672 NLRP13Q86W25 1043 aa13.32□□□□□ -0.28
PDGFC-204ENST00000504672 CCDC61Q9Y6R9 512 aa13.32□□□□□ -0.28
PDGFC-204ENST00000504672 CRYBG1Q9Y4K1 1723 aa13.32□□□□□ -0.28
PDGFC-204ENST00000504672 CPDO75976 1380 aa13.32□□□□□ -0.28
PDGFC-204ENST00000504672 OVOS2A0A0G2JMS6 1433 aa13.31□□□□□ -0.28
PDGFC-204ENST00000504672 OVOS2A0A0J9YW53 1432 aa13.31□□□□□ -0.28
PDGFC-204ENST00000504672 OVOS2Q6IE36 1432 aa13.31□□□□□ -0.28
PDGFC-204ENST00000504672 PLEKHG3A1L390 1219 aa13.31□□□□□ -0.28
PDGFC-204ENST00000504672 ARXQ96QS3 562 aa13.31□□□□□ -0.28
PDGFC-204ENST00000504672 ADGRB1O14514 1584 aa13.31□□□□□ -0.28
PDGFC-204ENST00000504672 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
PDGFC-204ENST00000504672 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
PDGFC-204ENST00000504672 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
PDGFC-204ENST00000504672 MTFR1LQ9H019 292 aa13.3□□□□□ -0.28
PDGFC-204ENST00000504672 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
PDGFC-204ENST00000504672 USP19O94966 1318 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms