RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 GLI3P10071 1580 aa17.83■□□□□ 0.44
PDGFRA-204ENST00000504461 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
PDGFRA-204ENST00000504461 COL14A1Q05707 1796 aaKnown RBP17.82■□□□□ 0.44
PDGFRA-204ENST00000504461 FAM83GA6ND36 823 aa17.82■□□□□ 0.44
PDGFRA-204ENST00000504461 CRYBG1Q9Y4K1 1723 aa17.81■□□□□ 0.44
PDGFRA-204ENST00000504461 CENPJQ9HC77 1338 aaPredicted RBP17.81■□□□□ 0.44
PDGFRA-204ENST00000504461 TRPM1Q7Z4N2 1603 aa17.81■□□□□ 0.44
PDGFRA-204ENST00000504461 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
PDGFRA-204ENST00000504461 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
PDGFRA-204ENST00000504461 VPS72Q15906 364 aa17.8■□□□□ 0.44
PDGFRA-204ENST00000504461 NRAPQ86VF7 1730 aa17.78■□□□□ 0.44
PDGFRA-204ENST00000504461 ACEP12821 1306 aa17.78■□□□□ 0.44
PDGFRA-204ENST00000504461 NBPF8Q3BBV2 869 aa17.78■□□□□ 0.44
PDGFRA-204ENST00000504461 BTG4Q9NY30 223 aa17.78■□□□□ 0.44
PDGFRA-204ENST00000504461 PHRF1Q9P1Y6 1649 aaKnown RBP17.77■□□□□ 0.44
PDGFRA-204ENST00000504461 PLEKHG3A1L390 1219 aa17.77■□□□□ 0.44
PDGFRA-204ENST00000504461 CCDC125Q86Z20 511 aa17.76■□□□□ 0.43
PDGFRA-204ENST00000504461 POLR3AO14802 1390 aaPredicted RBP17.76■□□□□ 0.43
PDGFRA-204ENST00000504461 NUTM2GQ5VZR2 741 aa17.75■□□□□ 0.43
PDGFRA-204ENST00000504461 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
PDGFRA-204ENST00000504461 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
PDGFRA-204ENST00000504461 PRDM11Q9NQV5 511 aa17.75■□□□□ 0.43
PDGFRA-204ENST00000504461 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
PDGFRA-204ENST00000504461 A0A0G2JS52 829 aa17.74■□□□□ 0.43
PDGFRA-204ENST00000504461 MYT1Q01538 1121 aa17.74■□□□□ 0.43
PDGFRA-204ENST00000504461 ABTB2Q8N961 1025 aa17.73■□□□□ 0.43
PDGFRA-204ENST00000504461 ROCK2O75116 1388 aaKnown RBP17.73■□□□□ 0.43
PDGFRA-204ENST00000504461 ONECUT3O60422 494 aaPredicted RBP17.72■□□□□ 0.43
PDGFRA-204ENST00000504461 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.43
PDGFRA-204ENST00000504461 EVC2Q86UK5 1308 aa17.71■□□□□ 0.42
PDGFRA-204ENST00000504461 CLSPNQ9HAW4 1339 aa17.71■□□□□ 0.42
PDGFRA-204ENST00000504461 FAM98CQ17RN3 349 aaKnown RBP17.7■□□□□ 0.42
PDGFRA-204ENST00000504461 KRT27Q7Z3Y8 459 aa17.7■□□□□ 0.42
PDGFRA-204ENST00000504461 KIAA0232Q92628 1395 aa17.69■□□□□ 0.42
PDGFRA-204ENST00000504461 SF3B2Q13435 895 aaKnown RBP17.69■□□□□ 0.42
PDGFRA-204ENST00000504461 CHRNA2Q15822 529 aa17.69■□□□□ 0.42
PDGFRA-204ENST00000504461 CABP1Q9NZU7 370 aa17.69■□□□□ 0.42
PDGFRA-204ENST00000504461 NLRP13Q86W25 1043 aa17.68■□□□□ 0.42
PDGFRA-204ENST00000504461 EVA1CP58658 441 aa17.67■□□□□ 0.42
PDGFRA-204ENST00000504461 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
PDGFRA-204ENST00000504461 SPATA31A5Q5VU36 1347 aa17.67■□□□□ 0.42
PDGFRA-204ENST00000504461 SPATA31A7Q8IWB4 1347 aa17.67■□□□□ 0.42
PDGFRA-204ENST00000504461 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
PDGFRA-204ENST00000504461 BLMP54132 1417 aaPredicted RBP17.66■□□□□ 0.42
PDGFRA-204ENST00000504461 AKAP12Q02952 1782 aa17.66■□□□□ 0.42
PDGFRA-204ENST00000504461 NRKQ7Z2Y5 1582 aa17.66■□□□□ 0.42
PDGFRA-204ENST00000504461 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
PDGFRA-204ENST00000504461 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
PDGFRA-204ENST00000504461 USP6P35125 1406 aa17.64■□□□□ 0.41
PDGFRA-204ENST00000504461 GCP02774 474 aa17.63■□□□□ 0.41
PDGFRA-204ENST00000504461 EP400Q96L91 3159 aa17.63■□□□□ 0.41
PDGFRA-204ENST00000504461 NLRP6P59044 892 aa17.62■□□□□ 0.41
PDGFRA-204ENST00000504461 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
PDGFRA-204ENST00000504461 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
PDGFRA-204ENST00000504461 CARD11Q9BXL7 1154 aa17.62■□□□□ 0.41
PDGFRA-204ENST00000504461 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
PDGFRA-204ENST00000504461 SPATA31A1Q5TZJ5 1347 aa17.62■□□□□ 0.41
PDGFRA-204ENST00000504461 THSD7AQ9UPZ6 1657 aa17.61■□□□□ 0.41
PDGFRA-204ENST00000504461 USP35Q9P2H5 1018 aa17.61■□□□□ 0.41
PDGFRA-204ENST00000504461 USP19O94966 1318 aa17.61■□□□□ 0.41
PDGFRA-204ENST00000504461 RGPD1P0DJD0 1748 aa17.61■□□□□ 0.41
PDGFRA-204ENST00000504461 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
PDGFRA-204ENST00000504461 CPDO75976 1380 aa17.6■□□□□ 0.41
PDGFRA-204ENST00000504461 PIK3C2AO00443 1686 aa17.6■□□□□ 0.41
PDGFRA-204ENST00000504461 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
PDGFRA-204ENST00000504461 CAMTA1Q9Y6Y1 1673 aa17.6■□□□□ 0.41
PDGFRA-204ENST00000504461 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
PDGFRA-204ENST00000504461 SSH2Q76I76 1423 aa17.58■□□□□ 0.41
PDGFRA-204ENST00000504461 RGPD5Q99666 1765 aa17.58■□□□□ 0.4
PDGFRA-204ENST00000504461 FAM182BQ5T319 152 aa17.57■□□□□ 0.4
PDGFRA-204ENST00000504461 MON2Q7Z3U7 1717 aa17.56■□□□□ 0.4
PDGFRA-204ENST00000504461 BAG6P46379 1132 aa17.56■□□□□ 0.4
PDGFRA-204ENST00000504461 LARP1Q6PKG0 1096 aaKnown RBP17.56■□□□□ 0.4
PDGFRA-204ENST00000504461 SLIT3O75094 1523 aa17.56■□□□□ 0.4
PDGFRA-204ENST00000504461 KTN1Q86UP2 1357 aaKnown RBP17.55■□□□□ 0.4
PDGFRA-204ENST00000504461 SBNO2Q9Y2G9 1366 aa17.55■□□□□ 0.4
PDGFRA-204ENST00000504461 TTC21BQ7Z4L5 1316 aa17.55■□□□□ 0.4
PDGFRA-204ENST00000504461 TTC21AQ8NDW8 1320 aa17.54■□□□□ 0.4
PDGFRA-204ENST00000504461 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
PDGFRA-204ENST00000504461 BARGINQ6ZT62 677 aa17.54■□□□□ 0.4
PDGFRA-204ENST00000504461 TCP11L2Q8N4U5 519 aa17.54■□□□□ 0.4
PDGFRA-204ENST00000504461 COL5A2P05997 1499 aaPredicted RBP17.53■□□□□ 0.4
PDGFRA-204ENST00000504461 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
PDGFRA-204ENST00000504461 TMC1Q8TDI8 760 aa17.53■□□□□ 0.4
PDGFRA-204ENST00000504461 THRAP3Q9Y2W1 955 aaKnown RBP17.53■□□□□ 0.4
PDGFRA-204ENST00000504461 COL18A1P39060 1754 aa17.53■□□□□ 0.4
PDGFRA-204ENST00000504461 TNS1Q9HBL0 1735 aaKnown RBP17.52■□□□□ 0.4
PDGFRA-204ENST00000504461 FAM196AQ6ZSG2 479 aa17.52■□□□□ 0.4
PDGFRA-204ENST00000504461 CPSF1Q10570 1443 aaKnown RBP17.52■□□□□ 0.4
PDGFRA-204ENST00000504461 AATKQ6ZMQ8 1374 aa17.52■□□□□ 0.39
PDGFRA-204ENST00000504461 SOX12O15370 315 aa17.51■□□□□ 0.39
PDGFRA-204ENST00000504461 PARP4Q9UKK3 1724 aaKnown RBP17.51■□□□□ 0.39
PDGFRA-204ENST00000504461 CRB1P82279 1406 aa17.5■□□□□ 0.39
PDGFRA-204ENST00000504461 HDGFL2Q7Z4V5 671 aaPredicted RBP17.5■□□□□ 0.39
PDGFRA-204ENST00000504461 EN1Q05925 392 aaPredicted RBP17.49■□□□□ 0.39
PDGFRA-204ENST00000504461 TOM1L2Q6ZVM7 507 aa17.49■□□□□ 0.39
PDGFRA-204ENST00000504461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.49■□□□□ 0.39
PDGFRA-204ENST00000504461 TRIM37O94972 964 aa17.48■□□□□ 0.39
PDGFRA-204ENST00000504461 WNK3Q9BYP7 1800 aa17.48■□□□□ 0.39
PDGFRA-204ENST00000504461 LTN1O94822 1766 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms