RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 SNRKQ9NRH2 765 aa9.55□□□□□ -0.88
TRAPPC13-205ENST00000504243 APBB1O00213 710 aa9.54□□□□□ -0.88
TRAPPC13-205ENST00000504243 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
TRAPPC13-205ENST00000504243 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
TRAPPC13-205ENST00000504243 WNT7BP56706 349 aa9.53□□□□□ -0.88
TRAPPC13-205ENST00000504243 ARID3CA6NKF2 412 aa9.51□□□□□ -0.89
TRAPPC13-205ENST00000504243 NR6A1Q15406 480 aa9.51□□□□□ -0.89
TRAPPC13-205ENST00000504243 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
TRAPPC13-205ENST00000504243 BAP1Q92560 729 aa9.51□□□□□ -0.89
TRAPPC13-205ENST00000504243 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.89
TRAPPC13-205ENST00000504243 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
TRAPPC13-205ENST00000504243 ARID3AQ99856 593 aa9.51□□□□□ -0.89
TRAPPC13-205ENST00000504243 HMX1Q9NP08 348 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC13-205ENST00000504243 A6NJR5 290 aa9.5□□□□□ -0.89
TRAPPC13-205ENST00000504243 PRM3Q9NNZ6 103 aa9.5□□□□□ -0.89
TRAPPC13-205ENST00000504243 ZC3H4Q9UPT8 1303 aaKnown RBP9.5□□□□□ -0.89
TRAPPC13-205ENST00000504243 ZNF511Q8NB15 262 aa9.49□□□□□ -0.89
TRAPPC13-205ENST00000504243 FKBPLQ9UIM3 349 aa9.49□□□□□ -0.89
TRAPPC13-205ENST00000504243 TRAK2O60296 914 aa9.48□□□□□ -0.89
TRAPPC13-205ENST00000504243 SH3BP2P78314 561 aa9.48□□□□□ -0.89
TRAPPC13-205ENST00000504243 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
TRAPPC13-205ENST00000504243 PROSER2Q86WR7 435 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC13-205ENST00000504243 WNT7AO00755 349 aa9.47□□□□□ -0.89
TRAPPC13-205ENST00000504243 SKOR1P84550 965 aa9.47□□□□□ -0.89
TRAPPC13-205ENST00000504243 RC3H1Q5TC82 1133 aaKnown RBP9.47□□□□□ -0.89
TRAPPC13-205ENST00000504243 MTMR14Q8NCE2 650 aa9.47□□□□□ -0.89
TRAPPC13-205ENST00000504243 GJD4Q96KN9 370 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC13-205ENST00000504243 ARXQ96QS3 562 aa9.47□□□□□ -0.89
TRAPPC13-205ENST00000504243 TRIM34Q9BYJ4 488 aa9.47□□□□□ -0.89
TRAPPC13-205ENST00000504243 PRR20EP86478 221 aa9.46□□□□□ -0.9
TRAPPC13-205ENST00000504243 PRR20CP86479 221 aa9.46□□□□□ -0.9
TRAPPC13-205ENST00000504243 PRR20DP86480 221 aa9.46□□□□□ -0.9
TRAPPC13-205ENST00000504243 PRR20BP86481 221 aa9.46□□□□□ -0.9
TRAPPC13-205ENST00000504243 PRR20AP86496 221 aa9.46□□□□□ -0.9
TRAPPC13-205ENST00000504243 PDXDC2PQ6P474 469 aa9.46□□□□□ -0.9
TRAPPC13-205ENST00000504243 WWC1Q8IX03 1113 aa9.46□□□□□ -0.9
TRAPPC13-205ENST00000504243 EPS8L1Q8TE68 723 aa9.46□□□□□ -0.9
TRAPPC13-205ENST00000504243 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
TRAPPC13-205ENST00000504243 GDF9O60383 454 aa9.45□□□□□ -0.9
TRAPPC13-205ENST00000504243 VARSP26640 1264 aaKnown RBP9.45□□□□□ -0.9
TRAPPC13-205ENST00000504243 ABL2P42684 1182 aa9.45□□□□□ -0.9
TRAPPC13-205ENST00000504243 FOXC1Q12948 553 aa9.45□□□□□ -0.9
TRAPPC13-205ENST00000504243 BPHLQ86WA6 291 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC13-205ENST00000504243 GDPD2Q9HCC8 539 aa9.45□□□□□ -0.9
TRAPPC13-205ENST00000504243 PKD2L1Q9P0L9 805 aa9.45□□□□□ -0.9
TRAPPC13-205ENST00000504243 ZNF777Q9ULD5 760 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC13-205ENST00000504243 NDUFB9Q9Y6M9 179 aa9.45□□□□□ -0.9
TRAPPC13-205ENST00000504243 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
TRAPPC13-205ENST00000504243 AGERQ15109 404 aa9.44□□□□□ -0.9
TRAPPC13-205ENST00000504243 EHBP1Q8NDI1 1231 aa9.44□□□□□ -0.9
TRAPPC13-205ENST00000504243 PDZRN3Q9UPQ7 1066 aa9.44□□□□□ -0.9
TRAPPC13-205ENST00000504243 PTK2Q05397 1052 aa9.43□□□□□ -0.9
TRAPPC13-205ENST00000504243 HOMEZQ8IX15 550 aa9.43□□□□□ -0.9
TRAPPC13-205ENST00000504243 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC13-205ENST00000504243 GPSM3Q9Y4H4 160 aa9.43□□□□□ -0.9
TRAPPC13-205ENST00000504243 TRIM67Q6ZTA4 783 aa9.42□□□□□ -0.9
TRAPPC13-205ENST00000504243 FOXJ1Q92949 421 aa9.42□□□□□ -0.9
TRAPPC13-205ENST00000504243 MRGPRX2Q96LB1 330 aa9.42□□□□□ -0.9
TRAPPC13-205ENST00000504243 ZNF330Q9Y3S2 320 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC13-205ENST00000504243 TNFRSF10AO00220 468 aa9.41□□□□□ -0.9
TRAPPC13-205ENST00000504243 GFRA3O60609 400 aa9.41□□□□□ -0.9
TRAPPC13-205ENST00000504243 SH3BP5LQ7L8J4 393 aa9.41□□□□□ -0.9
TRAPPC13-205ENST00000504243 SH3RF1Q7Z6J0 888 aa9.41□□□□□ -0.9
TRAPPC13-205ENST00000504243 CYP4X1Q8N118 509 aa9.41□□□□□ -0.9
TRAPPC13-205ENST00000504243 FAM174AQ8TBP5 190 aa9.41□□□□□ -0.9
TRAPPC13-205ENST00000504243 NRG2O14511 850 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC13-205ENST00000504243 SNIP1Q8TAD8 396 aaKnown RBP9.4□□□□□ -0.9
TRAPPC13-205ENST00000504243 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
TRAPPC13-205ENST00000504243 C1orf115Q9H7X2 142 aa9.4□□□□□ -0.9
TRAPPC13-205ENST00000504243 TBC1D2BQ9UPU7 963 aa9.4□□□□□ -0.9
TRAPPC13-205ENST00000504243 TTC24A2A3L6 582 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC13-205ENST00000504243 MAGEB6P1A0A0J9YX57 407 aa9.38□□□□□ -0.91
TRAPPC13-205ENST00000504243 SIAH2O43255 324 aa9.38□□□□□ -0.91
TRAPPC13-205ENST00000504243 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
TRAPPC13-205ENST00000504243 MPNDQ8N594 471 aa9.38□□□□□ -0.91
TRAPPC13-205ENST00000504243 TOR4AQ9NXH8 423 aa9.38□□□□□ -0.91
TRAPPC13-205ENST00000504243 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
TRAPPC13-205ENST00000504243 FNBP4Q8N3X1 1017 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC13-205ENST00000504243 ZBBXA8MT70 800 aa9.36□□□□□ -0.91
TRAPPC13-205ENST00000504243 C1QTNF2Q9BXJ5 285 aa9.36□□□□□ -0.91
TRAPPC13-205ENST00000504243 CARD14Q9BXL6 1004 aa9.36□□□□□ -0.91
TRAPPC13-205ENST00000504243 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
TRAPPC13-205ENST00000504243 CCDC82Q8N4S0 544 aa9.35□□□□□ -0.91
TRAPPC13-205ENST00000504243 CCDC97Q96F63 343 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC13-205ENST00000504243 ERFEQ4G0M1 354 aa9.34□□□□□ -0.91
TRAPPC13-205ENST00000504243 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
TRAPPC13-205ENST00000504243 CDV3Q9UKY7 258 aaKnown RBP9.34□□□□□ -0.91
TRAPPC13-205ENST00000504243 ALDH1A1P00352 501 aa9.33□□□□□ -0.92
TRAPPC13-205ENST00000504243 NR1H3Q13133 447 aa9.33□□□□□ -0.92
TRAPPC13-205ENST00000504243 ADAM32Q8TC27 787 aa9.33□□□□□ -0.92
TRAPPC13-205ENST00000504243 CDK15Q96Q40 435 aa9.33□□□□□ -0.92
TRAPPC13-205ENST00000504243 OCSTAMPQ9BR26 566 aa9.33□□□□□ -0.92
TRAPPC13-205ENST00000504243 WASF2Q9Y6W5 498 aa9.33□□□□□ -0.92
TRAPPC13-205ENST00000504243 GPR37L1O60883 481 aa9.32□□□□□ -0.92
TRAPPC13-205ENST00000504243 DGAT1O75907 488 aa9.32□□□□□ -0.92
TRAPPC13-205ENST00000504243 MCCD1P59942 119 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC13-205ENST00000504243 PKDCCQ504Y2 493 aa9.32□□□□□ -0.92
TRAPPC13-205ENST00000504243 SLC10A4Q96EP9 437 aa9.32□□□□□ -0.92
TRAPPC13-205ENST00000504243 MAP4K5Q9Y4K4 846 aa9.32□□□□□ -0.92
TRAPPC13-205ENST00000504243 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms