RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 SF3B2Q13435 895 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 CCDC158Q5M9N0 1113 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 PLEKHH2Q8IVE3 1493 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 GNL3LQ9NVN8 582 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 ADAMTS8Q9UP79 889 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 CLASRPQ8N2M8 674 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 PDILTQ8N807 584 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 PPP2R1AP30153 589 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 RRP12Q5JTH9 1297 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 AFAP1Q8N556 730 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 CDK5RAP3Q96JB5 506 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 PPP1R1BQ9UD71 204 aaPredicted RBP8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 RUFY1Q96T51 708 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 HSP90AB2PQ58FF8 381 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 TWISTNBQ3B726 338 aaPredicted RBP8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 AK7Q96M32 723 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 ERICH3Q5RHP9 1530 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 WWC2Q6AWC2 1192 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 TOM1L2Q6ZVM7 507 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 C1orf115Q9H7X2 142 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 SPG7Q9UQ90 795 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 C9orf84Q5VXU9 1444 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 HSP90AA2PQ14568 343 aaPredicted RBP8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 IFT57Q9NWB7 429 aa8.61□□□□□ -1.03
SYNPO2-205ENST00000504178 GNAI2P04899 355 aa8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 CCAR1Q8IX12 1150 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 NOB1Q9ULX3 412 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 EXOSC9Q06265 439 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 ZNF771Q7L3S4 317 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 TCP11L2Q8N4U5 519 aa8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 IFT140Q96RY7 1462 aa8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 ZFYVE27Q5T4F4 411 aa8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 TEX35Q5T0J7 233 aa8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 THEMISQ8N1K5 641 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 EFCAB5A4FU69 1503 aa8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 DDX54Q8TDD1 881 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-205ENST00000504178 CFTRP13569 1480 aa8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 RTEL1-TNFRSF6BF6WH68 1400 aa8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 CAGE1Q8TC20 777 aa8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 PNISRQ8TF01 805 aaKnown RBP8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 ERBINQ96RT1 1412 aa8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 MNS1Q8NEH6 495 aa8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 LETM1O95202 739 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 STK11IPQ8N1F8 1099 aa8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 MAGEC2Q9UBF1 373 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 SUPT6HQ7KZ85 1726 aaKnown RBP8.59□□□□□ -1.03
SYNPO2-205ENST00000504178 OFD1O75665 1012 aa8.59□□□□□ -1.04
SYNPO2-205ENST00000504178 CDR1P51861 262 aa8.59□□□□□ -1.04
SYNPO2-205ENST00000504178 ATP2B2Q01814 1243 aa8.59□□□□□ -1.04
SYNPO2-205ENST00000504178 KRT18P05783 430 aaKnown RBP8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 MYL6BP14649 208 aa8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 ZNF396Q96N95 335 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 TXLNAP40222 546 aa8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 ZNF692Q9BU19 519 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 SNAPC4Q5SXM2 1469 aa8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 HFM1A2PYH4 1435 aa8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 SLC4A2P04920 1241 aa8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 SIL1Q9H173 461 aa8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 MAP4K4O95819 1239 aaPredicted RBP8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 ZNF428Q96B54 188 aa8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 GCC1Q96CN9 775 aa8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 SDF4Q9BRK5 362 aa8.58□□□□□ -1.04
SYNPO2-205ENST00000504178 ATP2B1P20020 1258 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 CCT4P50991 539 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 RBM5P52756 815 aaKnown RBP eCLIP8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 HDGFL1Q5TGJ6 251 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 SULT6B1Q6IMI4 303 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 ZNF530Q6P9A1 599 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 ACBD3Q9H3P7 528 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 CABP1Q9NZU7 370 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 CCDC39Q9UFE4 941 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 NCAPD3P42695 1498 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 ARGLU1Q9NWB6 273 aaPredicted RBP8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 CCDC69A6NI79 296 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 SMC2O95347 1197 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 KIAA1107Q9UPP5 1409 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 PIP4K2BP78356 416 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 CCDC173Q0VFZ6 552 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 TTLL5Q6EMB2 1281 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 PDZRN3Q9UPQ7 1066 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 FANCIQ9NVI1 1328 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 TSR2Q969E8 191 aaKnown RBP8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 POGZQ7Z3K3 1410 aa8.57□□□□□ -1.04
SYNPO2-205ENST00000504178 LRRCC1Q9C099 1032 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 BCL11BQ9C0K0 894 aaPredicted RBP8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 SMARCE1Q969G3 411 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 NACAP1Q9BZK3 213 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 SYCP1Q15431 976 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 FILIP1LQ4L180 1135 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 ANKLE2Q86XL3 938 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 BTBD11A6QL63 1104 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 RDXP35241 583 aaKnown RBP8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 ZSCAN25Q6NSZ9 544 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 CDCA7LQ96GN5 454 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 TSPY26PQ9H489 355 aa8.56□□□□□ -1.04
SYNPO2-205ENST00000504178 SYNJ1O43426 1573 aa8.55□□□□□ -1.04
SYNPO2-205ENST00000504178 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms