RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ERCC4Q92889 916 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-204ENST00000504131 CARD10Q9BWT7 1032 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 PRDM4Q9UKN5 801 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 NF2P35240 595 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 CCDC173Q0VFZ6 552 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 LEKR1Q6ZMV7 388 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 GPBP1L1Q9HC44 474 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-204ENST00000504131 INCENPQ9NQS7 918 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 MRE11P49959 708 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 ZHX3Q9H4I2 956 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 FYB1O15117 783 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 FMNL3Q8IVF7 1028 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 ARL10Q8N8L6 244 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 RBM33Q96EV2 1170 aaKnown RBP7.48□□□□□ -1.21
CLCN3-204ENST00000504131 RBBP5Q15291 538 aaKnown RBP7.48□□□□□ -1.21
CLCN3-204ENST00000504131 CCDC65Q8IXS2 484 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 ZMAT2Q96NC0 199 aaKnown RBP7.48□□□□□ -1.21
CLCN3-204ENST00000504131 STK31Q9BXU1 1019 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 PPME1Q9Y570 386 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 SHTN1A0MZ66 631 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 ERCC3P19447 782 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 ABCD1P33897 745 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 FAM114A1Q8IWE2 563 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 CHCHD3Q9NX63 227 aaKnown RBP7.48□□□□□ -1.21
CLCN3-204ENST00000504131 FEZ2Q9UHY8 353 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-204ENST00000504131 TOP2AP11388 1531 aaKnown RBP7.48□□□□□ -1.21
CLCN3-204ENST00000504131 SPDYE4A6NLX3 237 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 RNF217Q8TC41 542 aa7.48□□□□□ -1.21
CLCN3-204ENST00000504131 PAX3P23760 479 aa7.47□□□□□ -1.21
CLCN3-204ENST00000504131 KIAA1328Q86T90 577 aa7.47□□□□□ -1.21
CLCN3-204ENST00000504131 ZNF777Q9ULD5 760 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-204ENST00000504131 ERBB3P21860 1342 aa7.47□□□□□ -1.21
CLCN3-204ENST00000504131 SAFB2Q14151 953 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLCN3-204ENST00000504131 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
CLCN3-204ENST00000504131 BIN2Q9UBW5 565 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-204ENST00000504131 U2AF1L5P0DN76 240 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-204ENST00000504131 ATICP31939 592 aa7.47□□□□□ -1.21
CLCN3-204ENST00000504131 U2AF1Q01081 240 aaKnown RBP eCLIP7.47□□□□□ -1.218e-8■■■■□ 19.8
CLCN3-204ENST00000504131 ARMC9Q7Z3E5 817 aa7.47□□□□□ -1.21
CLCN3-204ENST00000504131 FOXD1Q16676 465 aa7.46□□□□□ -1.21
CLCN3-204ENST00000504131 CTAGE5O15320 804 aa7.46□□□□□ -1.21
CLCN3-204ENST00000504131 KIAA0754O94854 1291 aa7.46□□□□□ -1.21
CLCN3-204ENST00000504131 GIGYF2Q6Y7W6 1299 aaKnown RBP7.46□□□□□ -1.21
CLCN3-204ENST00000504131 SUFUQ9UMX1 484 aa7.46□□□□□ -1.21
CLCN3-204ENST00000504131 KIF3CO14782 793 aa7.46□□□□□ -1.22
CLCN3-204ENST00000504131 NPM3O75607 178 aaKnown RBP7.46□□□□□ -1.22
CLCN3-204ENST00000504131 LMNB1P20700 586 aa7.46□□□□□ -1.22
CLCN3-204ENST00000504131 IRX5P78411 483 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-204ENST00000504131 WWC2Q6AWC2 1192 aa7.46□□□□□ -1.22
CLCN3-204ENST00000504131 NBPF10Q6P3W6 841 aaKnown RBP7.46□□□□□ -1.22
CLCN3-204ENST00000504131 G3BP2Q9UN86 482 aaKnown RBP7.46□□□□□ -1.22
CLCN3-204ENST00000504131 MROH2BQ7Z745 1585 aa7.46□□□□□ -1.22
CLCN3-204ENST00000504131 A0A1B0GUL7 405 aa7.46□□□□□ -1.22
CLCN3-204ENST00000504131 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
CLCN3-204ENST00000504131 VIMP08670 466 aaKnown RBP7.46□□□□□ -1.22
CLCN3-204ENST00000504131 PSMD2Q13200 908 aa7.46□□□□□ -1.22
CLCN3-204ENST00000504131 MRFAP1Q9Y605 127 aa7.46□□□□□ -1.22
CLCN3-204ENST00000504131 CCDC47Q96A33 483 aaKnown RBP7.46□□□□□ -1.22
CLCN3-204ENST00000504131 VTI1AQ96AJ9 217 aa7.46□□□□□ -1.22
CLCN3-204ENST00000504131 ANKRD24Q8TF21 1146 aa7.45□□□□□ -1.22
CLCN3-204ENST00000504131 WHAMMQ8TF30 809 aa7.45□□□□□ -1.22
CLCN3-204ENST00000504131 NCAPGQ9BPX3 1015 aa7.45□□□□□ -1.22
CLCN3-204ENST00000504131 MTA3Q9BTC8 594 aa7.45□□□□□ -1.22
CLCN3-204ENST00000504131 RRAGDQ9NQL2 400 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-204ENST00000504131 EPB41L2O43491 1005 aaKnown RBP7.45□□□□□ -1.22
CLCN3-204ENST00000504131 SPATS2LQ9NUQ6 558 aaKnown RBP7.45□□□□□ -1.22
CLCN3-204ENST00000504131 IKBKGQ9Y6K9 419 aa7.45□□□□□ -1.22
CLCN3-204ENST00000504131 EIF3JO75822 258 aaKnown RBP7.45□□□□□ -1.22
CLCN3-204ENST00000504131 KRI1Q8N9T8 703 aaKnown RBP7.45□□□□□ -1.22
CLCN3-204ENST00000504131 MYO6Q9UM54 1294 aa7.45□□□□□ -1.22
CLCN3-204ENST00000504131 RSF1Q96T23 1441 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-204ENST00000504131 hCG_2014768A0A024R1R8 64 aa7.45□□□□□ -1.22
CLCN3-204ENST00000504131 GBP2P32456 591 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-204ENST00000504131 USP5P45974 858 aa7.45□□□□□ -1.22
CLCN3-204ENST00000504131 JAKMIP3Q5VZ66 844 aa7.45□□□□□ -1.22
CLCN3-204ENST00000504131 SASS6Q6UVJ0 657 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 CCAR1Q8IX12 1150 aaKnown RBP7.44□□□□□ -1.22
CLCN3-204ENST00000504131 C10orf67Q8IYJ2 551 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 NUP133Q8WUM0 1156 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 DIAPH3Q9NSV4 1193 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 WASHC2CQ9Y4E1 1318 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 SETDB1Q15047 1291 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 RMDN2Q96LZ7 410 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 TCEAL9Q9UHQ7 104 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 MICALCLQ6ZW33 695 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 GTF2F1P35269 517 aaKnown RBP eCLIP7.44□□□□□ -1.22
CLCN3-204ENST00000504131 SPC24Q8NBT2 197 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 ATRIPQ8WXE1 791 aa7.44□□□□□ -1.22
CLCN3-204ENST00000504131 IQCGQ9H095 443 aaKnown RBP7.44□□□□□ -1.22
CLCN3-204ENST00000504131 IPO5O00410 1097 aaKnown RBP7.43□□□□□ -1.22
CLCN3-204ENST00000504131 PRPF4BQ13523 1007 aaKnown RBP7.43□□□□□ -1.22
CLCN3-204ENST00000504131 CCDC92Q53HC0 331 aaPredicted RBP7.43□□□□□ -1.22
CLCN3-204ENST00000504131 TRIM11Q96F44 468 aa7.43□□□□□ -1.22
CLCN3-204ENST00000504131 RIOK3O14730 519 aaKnown RBP7.43□□□□□ -1.22
CLCN3-204ENST00000504131 SCP2P22307 547 aa7.43□□□□□ -1.22
CLCN3-204ENST00000504131 TPX2Q9ULW0 747 aaKnown RBP7.43□□□□□ -1.22
CLCN3-204ENST00000504131 SMAPO00193 183 aa7.43□□□□□ -1.22
CLCN3-204ENST00000504131 WDR66Q8TBY9 1149 aa7.43□□□□□ -1.22
CLCN3-204ENST00000504131 SEPT11Q9NVA2 429 aaKnown RBP7.43□□□□□ -1.22
CLCN3-204ENST00000504131 WIZO95785 1651 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms