RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 NWD2Q9ULI1 1742 aa26.21■■□□□ 1.79
RNF4-204ENST00000503659 TONSLQ96HA7 1378 aa26.2■■□□□ 1.78
RNF4-204ENST00000503659 PLEKHG5O94827 1062 aa26.19■■□□□ 1.78
RNF4-204ENST00000503659 CCDC61Q9Y6R9 512 aa26.19■■□□□ 1.78
RNF4-204ENST00000503659 RALGAPBQ86X10 1494 aa26.18■■□□□ 1.78
RNF4-204ENST00000503659 PLEKHG3A1L390 1219 aa26.17■■□□□ 1.78
RNF4-204ENST00000503659 PHRF1Q9P1Y6 1649 aaKnown RBP26.17■■□□□ 1.78
RNF4-204ENST00000503659 ACEP12821 1306 aa26.16■■□□□ 1.78
RNF4-204ENST00000503659 PPIP5K1Q6PFW1 1433 aa26.16■■□□□ 1.78
RNF4-204ENST00000503659 SRPK2P78362 688 aaKnown RBP26.16■■□□□ 1.78
RNF4-204ENST00000503659 NRAPQ86VF7 1730 aa26.15■■□□□ 1.78
RNF4-204ENST00000503659 CABP2Q9NPB3 220 aa26.15■■□□□ 1.78
RNF4-204ENST00000503659 GLI3P10071 1580 aa26.15■■□□□ 1.78
RNF4-204ENST00000503659 PAK3O75914 559 aaPredicted RBP26.14■■□□□ 1.78
RNF4-204ENST00000503659 COL14A1Q05707 1796 aaKnown RBP26.12■■□□□ 1.77
RNF4-204ENST00000503659 VPS72Q15906 364 aa26.11■■□□□ 1.77
RNF4-204ENST00000503659 FAM83GA6ND36 823 aa26.09■■□□□ 1.77
RNF4-204ENST00000503659 EVC2Q86UK5 1308 aa26.09■■□□□ 1.77
RNF4-204ENST00000503659 CCDC125Q86Z20 511 aa26.08■■□□□ 1.77
RNF4-204ENST00000503659 AKAP12Q02952 1782 aa26.07■■□□□ 1.76
RNF4-204ENST00000503659 SBNO2Q9Y2G9 1366 aa26.07■■□□□ 1.76
RNF4-204ENST00000503659 CARD11Q9BXL7 1154 aa26.06■■□□□ 1.76
RNF4-204ENST00000503659 NRKQ7Z2Y5 1582 aa26.06■■□□□ 1.76
RNF4-204ENST00000503659 ONECUT3O60422 494 aaPredicted RBP26.04■■□□□ 1.76
RNF4-204ENST00000503659 CABP1Q9NZU7 370 aa26.04■■□□□ 1.76
RNF4-204ENST00000503659 USP6P35125 1406 aa26.04■■□□□ 1.76
RNF4-204ENST00000503659 EP400Q96L91 3159 aa26.03■■□□□ 1.76
RNF4-204ENST00000503659 BRWD3Q6RI45 1802 aa26.03■■□□□ 1.76
RNF4-204ENST00000503659 NUTM2GQ5VZR2 741 aa26.02■■□□□ 1.76
RNF4-204ENST00000503659 PIK3C2AO00443 1686 aa26.01■■□□□ 1.75
RNF4-204ENST00000503659 CCDC9Q9Y3X0 531 aaKnown RBP26.01■■□□□ 1.75
RNF4-204ENST00000503659 SSH2Q76I76 1423 aa26■■□□□ 1.75
RNF4-204ENST00000503659 BRD4O60885 1362 aaPredicted RBP26■■□□□ 1.75
RNF4-204ENST00000503659 SEPT12Q8IYM1 358 aa26■■□□□ 1.75
RNF4-204ENST00000503659 BTG4Q9NY30 223 aa26■■□□□ 1.75
RNF4-204ENST00000503659 KIAA0232Q92628 1395 aa25.99■■□□□ 1.75
RNF4-204ENST00000503659 ABTB2Q8N961 1025 aa25.99■■□□□ 1.75
RNF4-204ENST00000503659 USP19O94966 1318 aa25.98■■□□□ 1.75
RNF4-204ENST00000503659 MON2Q7Z3U7 1717 aa25.97■■□□□ 1.75
RNF4-204ENST00000503659 PRDM11Q9NQV5 511 aa25.97■■□□□ 1.75
RNF4-204ENST00000503659 LMO7Q8WWI1 1683 aa25.96■■□□□ 1.75
RNF4-204ENST00000503659 SLIT3O75094 1523 aa25.94■■□□□ 1.74
RNF4-204ENST00000503659 CPSF1Q10570 1443 aaKnown RBP25.94■■□□□ 1.74
RNF4-204ENST00000503659 PCGF6Q9BYE7 350 aa25.93■■□□□ 1.74
RNF4-204ENST00000503659 BLMP54132 1417 aaPredicted RBP25.93■■□□□ 1.74
RNF4-204ENST00000503659 ZC3H6P61129 1189 aaKnown RBP25.92■■□□□ 1.74
RNF4-204ENST00000503659 CHRNA2Q15822 529 aa25.92■■□□□ 1.74
RNF4-204ENST00000503659 CPDO75976 1380 aa25.92■■□□□ 1.74
RNF4-204ENST00000503659 KRT27Q7Z3Y8 459 aa25.91■■□□□ 1.74
RNF4-204ENST00000503659 NLRP13Q86W25 1043 aa25.91■■□□□ 1.74
RNF4-204ENST00000503659 CD163L1Q9NR16 1453 aa25.91■■□□□ 1.74
RNF4-204ENST00000503659 SPATA31A5Q5VU36 1347 aa25.9■■□□□ 1.74
RNF4-204ENST00000503659 SPATA31A7Q8IWB4 1347 aa25.9■■□□□ 1.74
RNF4-204ENST00000503659 CAMTA1Q9Y6Y1 1673 aa25.9■■□□□ 1.74
RNF4-204ENST00000503659 CLSPNQ9HAW4 1339 aa25.89■■□□□ 1.74
RNF4-204ENST00000503659 THSD7AQ9UPZ6 1657 aa25.89■■□□□ 1.73
RNF4-204ENST00000503659 GCP02774 474 aa25.88■■□□□ 1.73
RNF4-204ENST00000503659 FAM98CQ17RN3 349 aaKnown RBP25.88■■□□□ 1.73
RNF4-204ENST00000503659 ZNF692Q9BU19 519 aaPredicted RBP25.88■■□□□ 1.73
RNF4-204ENST00000503659 TESK2Q96S53 571 aa25.87■■□□□ 1.73
RNF4-204ENST00000503659 TTC21BQ7Z4L5 1316 aa25.87■■□□□ 1.73
RNF4-204ENST00000503659 KTN1Q86UP2 1357 aaKnown RBP25.86■■□□□ 1.73
RNF4-204ENST00000503659 A0A0G2JS52 829 aa25.86■■□□□ 1.73
RNF4-204ENST00000503659 NLRP6P59044 892 aa25.86■■□□□ 1.73
RNF4-204ENST00000503659 MYT1Q01538 1121 aa25.86■■□□□ 1.73
RNF4-204ENST00000503659 USP54Q70EL1 1684 aa25.86■■□□□ 1.73
RNF4-204ENST00000503659 ST20-MTHFSA0A0A6YYL1 179 aa25.85■■□□□ 1.73
RNF4-204ENST00000503659 SF3B2Q13435 895 aaKnown RBP25.85■■□□□ 1.73
RNF4-204ENST00000503659 ZRANB1Q9UGI0 708 aa25.85■■□□□ 1.73
RNF4-204ENST00000503659 COL18A1P39060 1754 aa25.84■■□□□ 1.73
RNF4-204ENST00000503659 TTC21AQ8NDW8 1320 aa25.83■■□□□ 1.73
RNF4-204ENST00000503659 SPATA31A1Q5TZJ5 1347 aa25.82■■□□□ 1.72
RNF4-204ENST00000503659 USP47Q96K76 1375 aa25.82■■□□□ 1.72
RNF4-204ENST00000503659 PUS7Q96PZ0 661 aaKnown RBP25.81■■□□□ 1.72
RNF4-204ENST00000503659 STRN4Q9NRL3 753 aa25.81■■□□□ 1.72
RNF4-204ENST00000503659 TIMELESSQ9UNS1 1208 aa25.81■■□□□ 1.72
RNF4-204ENST00000503659 COL5A2P05997 1499 aaPredicted RBP25.8■■□□□ 1.72
RNF4-204ENST00000503659 NFAT5O94916 1531 aa25.8■■□□□ 1.72
RNF4-204ENST00000503659 SLC12A5Q9H2X9 1139 aa25.8■■□□□ 1.72
RNF4-204ENST00000503659 TMC1Q8TDI8 760 aa25.79■■□□□ 1.72
RNF4-204ENST00000503659 RGPD5Q99666 1765 aa25.77■■□□□ 1.72
RNF4-204ENST00000503659 EVA1CP58658 441 aa25.77■■□□□ 1.72
RNF4-204ENST00000503659 A0A1W2PP64 1363 aa25.77■■□□□ 1.72
RNF4-204ENST00000503659 AATKQ6ZMQ8 1374 aa25.77■■□□□ 1.72
RNF4-204ENST00000503659 LARP1Q6PKG0 1096 aaKnown RBP25.76■■□□□ 1.71
RNF4-204ENST00000503659 EDC4Q6P2E9 1401 aaKnown RBP25.75■■□□□ 1.71
RNF4-204ENST00000503659 BARGINQ6ZT62 677 aa25.75■■□□□ 1.71
RNF4-204ENST00000503659 USP31Q70CQ4 1352 aa25.74■■□□□ 1.71
RNF4-204ENST00000503659 NINLQ9Y2I6 1382 aa25.74■■□□□ 1.71
RNF4-204ENST00000503659 DEFB132Q7Z7B7 95 aa25.74■■□□□ 1.71
RNF4-204ENST00000503659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.73■■□□□ 1.71
RNF4-204ENST00000503659 ZBTB7CA1YPR0 619 aa25.72■■□□□ 1.71
RNF4-204ENST00000503659 BAG6P46379 1132 aa25.72■■□□□ 1.71
RNF4-204ENST00000503659 HDGFL2Q7Z4V5 671 aaPredicted RBP25.72■■□□□ 1.71
RNF4-204ENST00000503659 LTN1O94822 1766 aa25.72■■□□□ 1.71
RNF4-204ENST00000503659 SLC24A1O60721 1099 aa25.71■■□□□ 1.71
RNF4-204ENST00000503659 ARHGEF25Q86VW2 580 aa25.71■■□□□ 1.71
RNF4-204ENST00000503659 NME9Q86XW9 330 aa25.71■■□□□ 1.71
RNF4-204ENST00000503659 KCNH5Q8NCM2 988 aa25.71■■□□□ 1.71
RNF4-204ENST00000503659 TERF2IPQ9NYB0 399 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms