RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-218ENST00000503547 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
NR1I3-218ENST00000503547 BTG4Q9NY30 223 aa13.09□□□□□ -0.31
NR1I3-218ENST00000503547 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
NR1I3-218ENST00000503547 RAB3GAP2Q9H2M9 1393 aa13.08□□□□□ -0.31
NR1I3-218ENST00000503547 BAG6P46379 1132 aa13.08□□□□□ -0.32
NR1I3-218ENST00000503547 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
NR1I3-218ENST00000503547 PHRF1Q9P1Y6 1649 aaKnown RBP13.07□□□□□ -0.32
NR1I3-218ENST00000503547 ONECUT3O60422 494 aaPredicted RBP13.07□□□□□ -0.32
NR1I3-218ENST00000503547 TNS1Q9HBL0 1735 aaKnown RBP13.07□□□□□ -0.32
NR1I3-218ENST00000503547 DCAF11Q8TEB1 546 aa13.06□□□□□ -0.32
NR1I3-218ENST00000503547 PRR36Q9H6K5 1346 aa13.06□□□□□ -0.32
NR1I3-218ENST00000503547 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
NR1I3-218ENST00000503547 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
NR1I3-218ENST00000503547 WASLO00401 505 aaPredicted RBP13.05□□□□□ -0.32
NR1I3-218ENST00000503547 PRDM11Q9NQV5 511 aa13.05□□□□□ -0.32
NR1I3-218ENST00000503547 FAM182BQ5T319 152 aa13.04□□□□□ -0.32
NR1I3-218ENST00000503547 TOPAZ1Q8N9V7 1692 aa13.03□□□□□ -0.32
NR1I3-218ENST00000503547 SPATA31A5Q5VU36 1347 aa13.03□□□□□ -0.32
NR1I3-218ENST00000503547 SPATA31A7Q8IWB4 1347 aa13.03□□□□□ -0.32
NR1I3-218ENST00000503547 ATP7BP35670 1465 aa13.02□□□□□ -0.33
NR1I3-218ENST00000503547 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
NR1I3-218ENST00000503547 STRN4Q9NRL3 753 aa13.01□□□□□ -0.33
NR1I3-218ENST00000503547 KIAA0232Q92628 1395 aa13.01□□□□□ -0.33
NR1I3-218ENST00000503547 KIAA1210Q9ULL0 1709 aa13□□□□□ -0.33
NR1I3-218ENST00000503547 CHRNA2Q15822 529 aa13□□□□□ -0.33
NR1I3-218ENST00000503547 NUDT16Q96DE0 195 aaKnown RBP13□□□□□ -0.33
NR1I3-218ENST00000503547 HRCP23327 699 aa12.99□□□□□ -0.33
NR1I3-218ENST00000503547 NUTM2GQ5VZR2 741 aa12.99□□□□□ -0.33
NR1I3-218ENST00000503547 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
NR1I3-218ENST00000503547 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
NR1I3-218ENST00000503547 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
NR1I3-218ENST00000503547 USP35Q9P2H5 1018 aa12.98□□□□□ -0.33
NR1I3-218ENST00000503547 SPATA31A1Q5TZJ5 1347 aa12.97□□□□□ -0.33
NR1I3-218ENST00000503547 EVA1CP58658 441 aa12.97□□□□□ -0.33
NR1I3-218ENST00000503547 R3HDM1Q15032 1099 aaKnown RBP12.97□□□□□ -0.33
NR1I3-218ENST00000503547 RREB1Q92766 1687 aa12.96□□□□□ -0.33
NR1I3-218ENST00000503547 TRIM37O94972 964 aa12.96□□□□□ -0.33
NR1I3-218ENST00000503547 CDK19Q9BWU1 502 aa12.96□□□□□ -0.33
NR1I3-218ENST00000503547 NUP188Q5SRE5 1749 aa12.96□□□□□ -0.34
NR1I3-218ENST00000503547 DISP2A7MBM2 1401 aa12.96□□□□□ -0.34
NR1I3-218ENST00000503547 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.34
NR1I3-218ENST00000503547 ACEP12821 1306 aa12.95□□□□□ -0.34
NR1I3-218ENST00000503547 EZH2Q15910 746 aaKnown RBP12.95□□□□□ -0.34
NR1I3-218ENST00000503547 FAM196AQ6ZSG2 479 aa12.95□□□□□ -0.34
NR1I3-218ENST00000503547 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
NR1I3-218ENST00000503547 LMO7Q8WWI1 1683 aa12.94□□□□□ -0.34
NR1I3-218ENST00000503547 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
NR1I3-218ENST00000503547 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
NR1I3-218ENST00000503547 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
NR1I3-218ENST00000503547 APBA3O96018 575 aa12.93□□□□□ -0.34
NR1I3-218ENST00000503547 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
NR1I3-218ENST00000503547 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
NR1I3-218ENST00000503547 CAMTA1Q9Y6Y1 1673 aa12.93□□□□□ -0.34
NR1I3-218ENST00000503547 NBPF8Q3BBV2 869 aa12.92□□□□□ -0.34
NR1I3-218ENST00000503547 SBF2Q86WG5 1849 aa12.92□□□□□ -0.34
NR1I3-218ENST00000503547 PPIP5K1Q6PFW1 1433 aa12.91□□□□□ -0.34
NR1I3-218ENST00000503547 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
NR1I3-218ENST00000503547 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
NR1I3-218ENST00000503547 LARP1Q6PKG0 1096 aaKnown RBP12.91□□□□□ -0.34
NR1I3-218ENST00000503547 AKAP12Q02952 1782 aa12.91□□□□□ -0.34
NR1I3-218ENST00000503547 PARD3Q8TEW0 1356 aa12.91□□□□□ -0.34
NR1I3-218ENST00000503547 WNK3Q9BYP7 1800 aa12.9□□□□□ -0.34
NR1I3-218ENST00000503547 RGPD5Q99666 1765 aa12.9□□□□□ -0.34
NR1I3-218ENST00000503547 BARGINQ6ZT62 677 aa12.9□□□□□ -0.34
NR1I3-218ENST00000503547 TCP11L2Q8N4U5 519 aa12.9□□□□□ -0.34
NR1I3-218ENST00000503547 CAMKK2Q96RR4 588 aa12.9□□□□□ -0.34
NR1I3-218ENST00000503547 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
NR1I3-218ENST00000503547 CPDO75976 1380 aa12.89□□□□□ -0.35
NR1I3-218ENST00000503547 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
NR1I3-218ENST00000503547 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
NR1I3-218ENST00000503547 KAT6BQ8WYB5 2073 aa12.88□□□□□ -0.35
NR1I3-218ENST00000503547 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
NR1I3-218ENST00000503547 USP19O94966 1318 aa12.88□□□□□ -0.35
NR1I3-218ENST00000503547 CENPJQ9HC77 1338 aaPredicted RBP12.88□□□□□ -0.35
NR1I3-218ENST00000503547 RGPD3A6NKT7 1758 aaPredicted RBP12.87□□□□□ -0.35
NR1I3-218ENST00000503547 RGPD4Q7Z3J3 1758 aa12.87□□□□□ -0.35
NR1I3-218ENST00000503547 NBPF1Q3BBV0 1214 aa12.87□□□□□ -0.35
NR1I3-218ENST00000503547 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
NR1I3-218ENST00000503547 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
NR1I3-218ENST00000503547 PIK3C2AO00443 1686 aa12.86□□□□□ -0.35
NR1I3-218ENST00000503547 GCP02774 474 aa12.86□□□□□ -0.35
NR1I3-218ENST00000503547 THRAP3Q9Y2W1 955 aaKnown RBP12.86□□□□□ -0.35
NR1I3-218ENST00000503547 CRB1P82279 1406 aa12.86□□□□□ -0.35
NR1I3-218ENST00000503547 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
NR1I3-218ENST00000503547 NLRP6P59044 892 aa12.84□□□□□ -0.35
NR1I3-218ENST00000503547 PPP1R1BQ9UD71 204 aaPredicted RBP12.84□□□□□ -0.35
NR1I3-218ENST00000503547 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
NR1I3-218ENST00000503547 OVOS2A0A0J9YW53 1432 aa12.84□□□□□ -0.35
NR1I3-218ENST00000503547 USP6P35125 1406 aa12.84□□□□□ -0.35
NR1I3-218ENST00000503547 OVOS2Q6IE36 1432 aa12.84□□□□□ -0.35
NR1I3-218ENST00000503547 TRPM1Q7Z4N2 1603 aa12.84□□□□□ -0.35
NR1I3-218ENST00000503547 COL18A1P39060 1754 aa12.84□□□□□ -0.35
NR1I3-218ENST00000503547 SLIT3O75094 1523 aa12.83□□□□□ -0.35
NR1I3-218ENST00000503547 BRD4O60885 1362 aaPredicted RBP12.83□□□□□ -0.36
NR1I3-218ENST00000503547 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
NR1I3-218ENST00000503547 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
NR1I3-218ENST00000503547 CABP1Q9NZU7 370 aa12.82□□□□□ -0.36
NR1I3-218ENST00000503547 DDB1Q16531 1140 aa12.81□□□□□ -0.36
NR1I3-218ENST00000503547 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
NR1I3-218ENST00000503547 SOX12O15370 315 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms