RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 TRPM3Q9HCF6 1732 aaPredicted RBP31.18■■■□□ 2.58
CCHCR1-217ENST00000503420 MARF1Q9Y4F3 1742 aaKnown RBP31.17■■■□□ 2.58
CCHCR1-217ENST00000503420 BCL9LQ86UU0 1499 aa31.16■■■□□ 2.58
CCHCR1-217ENST00000503420 ABTB2Q8N961 1025 aa31.16■■■□□ 2.58
CCHCR1-217ENST00000503420 ATRNO75882 1429 aa31.15■■■□□ 2.58
CCHCR1-217ENST00000503420 TIMELESSQ9UNS1 1208 aa31.15■■■□□ 2.58
CCHCR1-217ENST00000503420 TOPAZ1Q8N9V7 1692 aa31.15■■■□□ 2.58
CCHCR1-217ENST00000503420 FAM83GA6ND36 823 aa31.14■■■□□ 2.58
CCHCR1-217ENST00000503420 NUTM2GQ5VZR2 741 aa31.14■■■□□ 2.58
CCHCR1-217ENST00000503420 GJD4Q96KN9 370 aaPredicted RBP31.13■■■□□ 2.57
CCHCR1-217ENST00000503420 ALS2Q96Q42 1657 aa31.13■■■□□ 2.57
CCHCR1-217ENST00000503420 SLIT2O94813 1529 aa31.12■■■□□ 2.57
CCHCR1-217ENST00000503420 BRD4O60885 1362 aaPredicted RBP31.11■■■□□ 2.57
CCHCR1-217ENST00000503420 ATAD2Q6PL18 1390 aa31.11■■■□□ 2.57
CCHCR1-217ENST00000503420 CCER1Q8TC90 406 aaPredicted RBP31.11■■■□□ 2.57
CCHCR1-217ENST00000503420 SBNO2Q9Y2G9 1366 aa31.1■■■□□ 2.57
CCHCR1-217ENST00000503420 ZNF692Q9BU19 519 aaPredicted RBP31.1■■■□□ 2.57
CCHCR1-217ENST00000503420 CCDC9Q9Y3X0 531 aaKnown RBP31.1■■■□□ 2.57
CCHCR1-217ENST00000503420 NLRP13Q86W25 1043 aa31.09■■■□□ 2.57
CCHCR1-217ENST00000503420 PRDM11Q9NQV5 511 aa31.09■■■□□ 2.57
CCHCR1-217ENST00000503420 SLC24A1O60721 1099 aa31.08■■■□□ 2.57
CCHCR1-217ENST00000503420 RGS12O14924 1447 aa31.07■■■□□ 2.57
CCHCR1-217ENST00000503420 VPS72Q15906 364 aa31.06■■■□□ 2.56
CCHCR1-217ENST00000503420 BTG4Q9NY30 223 aa31.06■■■□□ 2.56
CCHCR1-217ENST00000503420 ABCA3Q99758 1704 aa31.04■■■□□ 2.56
CCHCR1-217ENST00000503420 ST20-MTHFSA0A0A6YYL1 179 aa31.03■■■□□ 2.56
CCHCR1-217ENST00000503420 ZC3H6P61129 1189 aaKnown RBP31.03■■■□□ 2.56
CCHCR1-217ENST00000503420 TMC1Q8TDI8 760 aa31.03■■■□□ 2.56
CCHCR1-217ENST00000503420 USP6P35125 1406 aa31.03■■■□□ 2.56
CCHCR1-217ENST00000503420 NLRP6P59044 892 aa31.01■■■□□ 2.55
CCHCR1-217ENST00000503420 KIAA0232Q92628 1395 aa31■■■□□ 2.55
CCHCR1-217ENST00000503420 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.99■■■□□ 2.55
CCHCR1-217ENST00000503420 UPF1Q92900 1129 aaKnown RBP eCLIP30.99■■■□□ 2.55
CCHCR1-217ENST00000503420 PUS7Q96PZ0 661 aaKnown RBP30.98■■■□□ 2.55
CCHCR1-217ENST00000503420 CHRNA2Q15822 529 aa30.97■■■□□ 2.55
CCHCR1-217ENST00000503420 NWD2Q9ULI1 1742 aa30.97■■■□□ 2.55
CCHCR1-217ENST00000503420 GCP02774 474 aa30.96■■■□□ 2.55
CCHCR1-217ENST00000503420 HDGFL2Q7Z4V5 671 aaPredicted RBP30.96■■■□□ 2.55
CCHCR1-217ENST00000503420 COL14A1Q05707 1796 aaKnown RBP30.96■■■□□ 2.55
CCHCR1-217ENST00000503420 USP19O94966 1318 aa30.96■■■□□ 2.55
CCHCR1-217ENST00000503420 KTN1Q86UP2 1357 aaKnown RBP30.95■■■□□ 2.55
CCHCR1-217ENST00000503420 PLCH1Q4KWH8 1693 aa30.95■■■□□ 2.55
CCHCR1-217ENST00000503420 TTC21BQ7Z4L5 1316 aa30.95■■■□□ 2.54
CCHCR1-217ENST00000503420 TESK2Q96S53 571 aa30.94■■■□□ 2.54
CCHCR1-217ENST00000503420 EVA1CP58658 441 aa30.93■■■□□ 2.54
CCHCR1-217ENST00000503420 TTC21AQ8NDW8 1320 aa30.93■■■□□ 2.54
CCHCR1-217ENST00000503420 USP47Q96K76 1375 aa30.92■■■□□ 2.54
CCHCR1-217ENST00000503420 A0A0G2JS52 829 aa30.92■■■□□ 2.54
CCHCR1-217ENST00000503420 MYT1Q01538 1121 aa30.92■■■□□ 2.54
CCHCR1-217ENST00000503420 TERF2IPQ9NYB0 399 aa30.92■■■□□ 2.54
CCHCR1-217ENST00000503420 SLC12A5Q9H2X9 1139 aa30.91■■■□□ 2.54
CCHCR1-217ENST00000503420 STRN4Q9NRL3 753 aa30.91■■■□□ 2.54
CCHCR1-217ENST00000503420 CPSF1Q10570 1443 aaKnown RBP30.9■■■□□ 2.54
CCHCR1-217ENST00000503420 SSH2Q76I76 1423 aa30.9■■■□□ 2.54
CCHCR1-217ENST00000503420 CRYBG1Q9Y4K1 1723 aa30.9■■■□□ 2.54
CCHCR1-217ENST00000503420 TMF1P82094 1093 aa30.9■■■□□ 2.54
CCHCR1-217ENST00000503420 SEPT12Q8IYM1 358 aa30.9■■■□□ 2.54
CCHCR1-217ENST00000503420 ZBTB7CA1YPR0 619 aa30.89■■■□□ 2.54
CCHCR1-217ENST00000503420 PHRF1Q9P1Y6 1649 aaKnown RBP30.88■■■□□ 2.53
CCHCR1-217ENST00000503420 CPDO75976 1380 aa30.88■■■□□ 2.53
CCHCR1-217ENST00000503420 GLI3P10071 1580 aa30.88■■■□□ 2.53
CCHCR1-217ENST00000503420 ONECUT3O60422 494 aaPredicted RBP30.87■■■□□ 2.53
CCHCR1-217ENST00000503420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.87■■■□□ 2.53
CCHCR1-217ENST00000503420 KCNH5Q8NCM2 988 aa30.86■■■□□ 2.53
CCHCR1-217ENST00000503420 SPATA31A5Q5VU36 1347 aa30.85■■■□□ 2.53
CCHCR1-217ENST00000503420 SPATA31A7Q8IWB4 1347 aa30.85■■■□□ 2.53
CCHCR1-217ENST00000503420 FAM98CQ17RN3 349 aaKnown RBP30.85■■■□□ 2.53
CCHCR1-217ENST00000503420 CDCA8Q53HL2 280 aa30.84■■■□□ 2.53
CCHCR1-217ENST00000503420 NRKQ7Z2Y5 1582 aa30.83■■■□□ 2.53
CCHCR1-217ENST00000503420 NINLQ9Y2I6 1382 aa30.82■■■□□ 2.52
CCHCR1-217ENST00000503420 AKAP12Q02952 1782 aa30.82■■■□□ 2.52
CCHCR1-217ENST00000503420 SOX12O15370 315 aa30.81■■■□□ 2.52
CCHCR1-217ENST00000503420 NRAPQ86VF7 1730 aa30.81■■■□□ 2.52
CCHCR1-217ENST00000503420 KRT27Q7Z3Y8 459 aa30.79■■■□□ 2.52
CCHCR1-217ENST00000503420 SPATA31A1Q5TZJ5 1347 aa30.78■■■□□ 2.52
CCHCR1-217ENST00000503420 USP35Q9P2H5 1018 aa30.78■■■□□ 2.52
CCHCR1-217ENST00000503420 CCDC125Q86Z20 511 aa30.77■■■□□ 2.52
CCHCR1-217ENST00000503420 PIK3C2AO00443 1686 aa30.77■■■□□ 2.52
CCHCR1-217ENST00000503420 NME9Q86XW9 330 aa30.76■■■□□ 2.51
CCHCR1-217ENST00000503420 SLIT3O75094 1523 aa30.76■■■□□ 2.51
CCHCR1-217ENST00000503420 A0A1W2PP64 1363 aa30.76■■■□□ 2.51
CCHCR1-217ENST00000503420 CD163L1Q9NR16 1453 aa30.76■■■□□ 2.51
CCHCR1-217ENST00000503420 EDC4Q6P2E9 1401 aaKnown RBP30.75■■■□□ 2.51
CCHCR1-217ENST00000503420 LARP1Q6PKG0 1096 aaKnown RBP30.75■■■□□ 2.51
CCHCR1-217ENST00000503420 AATKQ6ZMQ8 1374 aa30.75■■■□□ 2.51
CCHCR1-217ENST00000503420 ARHGEF25Q86VW2 580 aa30.73■■■□□ 2.51
CCHCR1-217ENST00000503420 ZRANB1Q9UGI0 708 aa30.73■■■□□ 2.51
CCHCR1-217ENST00000503420 CAMTA1Q9Y6Y1 1673 aa30.73■■■□□ 2.51
CCHCR1-217ENST00000503420 USP31Q70CQ4 1352 aa30.72■■■□□ 2.51
CCHCR1-217ENST00000503420 MON2Q7Z3U7 1717 aa30.72■■■□□ 2.51
CCHCR1-217ENST00000503420 TCP11L2Q8N4U5 519 aa30.71■■■□□ 2.51
CCHCR1-217ENST00000503420 EIF4G2P78344 907 aaKnown RBP eCLIP30.69■■■□□ 2.5
CCHCR1-217ENST00000503420 SF3B2Q13435 895 aaKnown RBP30.69■■■□□ 2.5
CCHCR1-217ENST00000503420 BARGINQ6ZT62 677 aa30.68■■■□□ 2.5
CCHCR1-217ENST00000503420 THRAP3Q9Y2W1 955 aaKnown RBP30.68■■■□□ 2.5
CCHCR1-217ENST00000503420 TOM1L2Q6ZVM7 507 aa30.67■■■□□ 2.5
CCHCR1-217ENST00000503420 ANKRD36BQ8N2N9 1353 aa30.66■■■□□ 2.5
CCHCR1-217ENST00000503420 COL5A2P05997 1499 aaPredicted RBP30.66■■■□□ 2.5
CCHCR1-217ENST00000503420 CSB-PGBD3P0DP91 1061 aa30.66■■■□□ 2.5
CCHCR1-217ENST00000503420 LMO7Q8WWI1 1683 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms