RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 NDUFB9Q9Y6M9 179 aa12□□□□□ -0.49
NIPBL-203ENST00000503274 TRIM32Q13049 653 aa11.99□□□□□ -0.49
NIPBL-203ENST00000503274 FKBPLQ9UIM3 349 aa11.99□□□□□ -0.49
NIPBL-203ENST00000503274 CD2BP2O95400 341 aaKnown RBP11.98□□□□□ -0.49
NIPBL-203ENST00000503274 BAP1Q92560 729 aa11.97□□□□□ -0.49
NIPBL-203ENST00000503274 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
NIPBL-203ENST00000503274 ZC3H4Q9UPT8 1303 aaKnown RBP11.96□□□□□ -0.49
NIPBL-203ENST00000503274 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
NIPBL-203ENST00000503274 GPKOWQ92917 476 aaPredicted RBP eCLIP11.96□□□□□ -0.49
NIPBL-203ENST00000503274 TBC1D2BQ9UPU7 963 aa11.96□□□□□ -0.49
NIPBL-203ENST00000503274 RAD21O60216 631 aa11.95□□□□□ -0.5
NIPBL-203ENST00000503274 LAPTM4AQ15012 233 aa11.95□□□□□ -0.5
NIPBL-203ENST00000503274 LINC01559Q495D7 138 aa11.95□□□□□ -0.5
NIPBL-203ENST00000503274 GDPD2Q9HCC8 539 aa11.95□□□□□ -0.5
NIPBL-203ENST00000503274 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
NIPBL-203ENST00000503274 SPRYD7Q5W111 196 aa11.94□□□□□ -0.5
NIPBL-203ENST00000503274 ZNF511Q8NB15 262 aa11.93□□□□□ -0.5
NIPBL-203ENST00000503274 POM121Q96HA1 1249 aa11.93□□□□□ -0.5
NIPBL-203ENST00000503274 GFRA3O60609 400 aa11.92□□□□□ -0.5
NIPBL-203ENST00000503274 WNT7BP56706 349 aa11.92□□□□□ -0.5
NIPBL-203ENST00000503274 SH3BP2P78314 561 aa11.92□□□□□ -0.5
NIPBL-203ENST00000503274 PDXDC2PQ6P474 469 aa11.92□□□□□ -0.5
NIPBL-203ENST00000503274 GPR37L1O60883 481 aa11.91□□□□□ -0.5
NIPBL-203ENST00000503274 ABL2P42684 1182 aa11.91□□□□□ -0.5
NIPBL-203ENST00000503274 CLUAP1Q96AJ1 413 aa11.91□□□□□ -0.5
NIPBL-203ENST00000503274 SKOR1P84550 965 aa11.9□□□□□ -0.5
NIPBL-203ENST00000503274 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
NIPBL-203ENST00000503274 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
NIPBL-203ENST00000503274 ERICH6Q7L0X2 663 aa11.89□□□□□ -0.51
NIPBL-203ENST00000503274 C14orf37Q86TY3 774 aa11.89□□□□□ -0.51
NIPBL-203ENST00000503274 PTK2Q05397 1052 aa11.88□□□□□ -0.51
NIPBL-203ENST00000503274 AGERQ15109 404 aa11.88□□□□□ -0.51
NIPBL-203ENST00000503274 SH3BP5LQ7L8J4 393 aa11.88□□□□□ -0.51
NIPBL-203ENST00000503274 BPHLQ86WA6 291 aaPredicted RBP11.88□□□□□ -0.51
NIPBL-203ENST00000503274 FOXJ1Q92949 421 aa11.88□□□□□ -0.51
NIPBL-203ENST00000503274 GPSM3Q9Y4H4 160 aa11.88□□□□□ -0.51
NIPBL-203ENST00000503274 IRF5Q13568 498 aa11.87□□□□□ -0.51
NIPBL-203ENST00000503274 A6NJR5 290 aa11.86□□□□□ -0.51
NIPBL-203ENST00000503274 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
NIPBL-203ENST00000503274 SH3RF1Q7Z6J0 888 aa11.86□□□□□ -0.51
NIPBL-203ENST00000503274 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
NIPBL-203ENST00000503274 ARHGAP9Q9BRR9 750 aa11.86□□□□□ -0.51
NIPBL-203ENST00000503274 ZBBXA8MT70 800 aa11.85□□□□□ -0.51
NIPBL-203ENST00000503274 ZMYND15Q9H091 742 aa11.85□□□□□ -0.51
NIPBL-203ENST00000503274 LCE2BO14633 110 aa11.84□□□□□ -0.51
NIPBL-203ENST00000503274 C4orf48Q5BLP8 95 aa11.84□□□□□ -0.51
NIPBL-203ENST00000503274 TRAF7Q6Q0C0 670 aa11.84□□□□□ -0.51
NIPBL-203ENST00000503274 MAGEB6P1A0A0J9YX57 407 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 WNT7AO00755 349 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 FBXO45P0C2W1 286 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 NR1H3Q13133 447 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 WASHC4Q2M389 1173 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 TRIM67Q6ZTA4 783 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 ZBTB33Q86T24 672 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 PROSER2Q86WR7 435 aaPredicted RBP11.83□□□□□ -0.52
NIPBL-203ENST00000503274 EHBP1Q8NDI1 1231 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 OCSTAMPQ9BR26 566 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 PDZRN3Q9UPQ7 1066 aa11.83□□□□□ -0.52
NIPBL-203ENST00000503274 NRG2O14511 850 aaPredicted RBP11.82□□□□□ -0.52
NIPBL-203ENST00000503274 VARSP26640 1264 aaKnown RBP11.82□□□□□ -0.52
NIPBL-203ENST00000503274 CARD14Q9BXL6 1004 aa11.82□□□□□ -0.52
NIPBL-203ENST00000503274 FOXC1Q12948 553 aa11.81□□□□□ -0.52
NIPBL-203ENST00000503274 FNBP4Q8N3X1 1017 aaPredicted RBP11.81□□□□□ -0.52
NIPBL-203ENST00000503274 ADAM32Q8TC27 787 aa11.81□□□□□ -0.52
NIPBL-203ENST00000503274 MRGPRX2Q96LB1 330 aa11.8□□□□□ -0.52
NIPBL-203ENST00000503274 PKD2L1Q9P0L9 805 aa11.8□□□□□ -0.52
NIPBL-203ENST00000503274 VAC14Q08AM6 782 aa11.79□□□□□ -0.52
NIPBL-203ENST00000503274 FAM174AQ8TBP5 190 aa11.79□□□□□ -0.52
NIPBL-203ENST00000503274 C1QTNF2Q9BXJ5 285 aa11.79□□□□□ -0.52
NIPBL-203ENST00000503274 TIMELESSQ9UNS1 1208 aa11.79□□□□□ -0.52
NIPBL-203ENST00000503274 GDF9O60383 454 aa11.78□□□□□ -0.52
NIPBL-203ENST00000503274 ERFEQ4G0M1 354 aa11.78□□□□□ -0.52
NIPBL-203ENST00000503274 ZNF330Q9Y3S2 320 aaPredicted RBP11.78□□□□□ -0.52
NIPBL-203ENST00000503274 SIAH2O43255 324 aa11.77□□□□□ -0.53
NIPBL-203ENST00000503274 TRAK2O60296 914 aa11.76□□□□□ -0.53
NIPBL-203ENST00000503274 TNFRSF10AO00220 468 aa11.75□□□□□ -0.53
NIPBL-203ENST00000503274 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
NIPBL-203ENST00000503274 TRMT44Q8IYL2 757 aaKnown RBP11.75□□□□□ -0.53
NIPBL-203ENST00000503274 PRR20EP86478 221 aa11.74□□□□□ -0.53
NIPBL-203ENST00000503274 PRR20CP86479 221 aa11.74□□□□□ -0.53
NIPBL-203ENST00000503274 PRR20DP86480 221 aa11.74□□□□□ -0.53
NIPBL-203ENST00000503274 PRR20BP86481 221 aa11.74□□□□□ -0.53
NIPBL-203ENST00000503274 PRR20AP86496 221 aa11.74□□□□□ -0.53
NIPBL-203ENST00000503274 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
NIPBL-203ENST00000503274 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
NIPBL-203ENST00000503274 MPNDQ8N594 471 aa11.73□□□□□ -0.53
NIPBL-203ENST00000503274 ZNF592Q92610 1267 aa11.73□□□□□ -0.53
NIPBL-203ENST00000503274 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
NIPBL-203ENST00000503274 PCDHB9Q9Y5E1 797 aa11.73□□□□□ -0.53
NIPBL-203ENST00000503274 CYP4X1Q8N118 509 aa11.72□□□□□ -0.53
NIPBL-203ENST00000503274 SNIP1Q8TAD8 396 aaKnown RBP11.72□□□□□ -0.53
NIPBL-203ENST00000503274 POM121CA8CG34 1229 aa11.71□□□□□ -0.53
NIPBL-203ENST00000503274 SOX11P35716 441 aa11.71□□□□□ -0.53
NIPBL-203ENST00000503274 ARID5BQ14865 1188 aa11.71□□□□□ -0.53
NIPBL-203ENST00000503274 CDK15Q96Q40 435 aa11.71□□□□□ -0.53
NIPBL-203ENST00000503274 CDV3Q9UKY7 258 aaKnown RBP11.71□□□□□ -0.53
NIPBL-203ENST00000503274 TLL2Q9Y6L7 1015 aa11.71□□□□□ -0.53
NIPBL-203ENST00000503274 TTC24A2A3L6 582 aaPredicted RBP11.7□□□□□ -0.54
NIPBL-203ENST00000503274 MAP4K5Q9Y4K4 846 aa11.7□□□□□ -0.54
NIPBL-203ENST00000503274 SEMA3FQ13275 785 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms