RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 UNC5CLQ8IV45 518 aa17.02■□□□□ 0.32
SYNE4-206ENST00000503121 MARF1Q9Y4F3 1742 aaKnown RBP17.01■□□□□ 0.31
SYNE4-206ENST00000503121 CLSPNQ9HAW4 1339 aa17.01■□□□□ 0.31
SYNE4-206ENST00000503121 TOPAZ1Q8N9V7 1692 aa17.01■□□□□ 0.31
SYNE4-206ENST00000503121 FAM83GA6ND36 823 aa17.01■□□□□ 0.31
SYNE4-206ENST00000503121 ABTB2Q8N961 1025 aa17.01■□□□□ 0.31
SYNE4-206ENST00000503121 CDK12Q9NYV4 1490 aaPredicted RBP17■□□□□ 0.31
SYNE4-206ENST00000503121 ATRNO75882 1429 aa17■□□□□ 0.31
SYNE4-206ENST00000503121 CCER1Q8TC90 406 aaPredicted RBP17■□□□□ 0.31
SYNE4-206ENST00000503121 ALS2Q96Q42 1657 aa17■□□□□ 0.31
SYNE4-206ENST00000503121 GJD4Q96KN9 370 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-206ENST00000503121 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
SYNE4-206ENST00000503121 SLIT2O94813 1529 aa16.99■□□□□ 0.31
SYNE4-206ENST00000503121 CCDC9Q9Y3X0 531 aaKnown RBP16.98■□□□□ 0.31
SYNE4-206ENST00000503121 RGS12O14924 1447 aa16.97■□□□□ 0.31
SYNE4-206ENST00000503121 PRDM11Q9NQV5 511 aa16.97■□□□□ 0.31
SYNE4-206ENST00000503121 ATAD2Q6PL18 1390 aa16.97■□□□□ 0.31
SYNE4-206ENST00000503121 SBNO2Q9Y2G9 1366 aa16.97■□□□□ 0.31
SYNE4-206ENST00000503121 ST20-MTHFSA0A0A6YYL1 179 aa16.96■□□□□ 0.31
SYNE4-206ENST00000503121 ZC3H6P61129 1189 aaKnown RBP16.96■□□□□ 0.31
SYNE4-206ENST00000503121 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
SYNE4-206ENST00000503121 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
SYNE4-206ENST00000503121 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
SYNE4-206ENST00000503121 ABCA3Q99758 1704 aa16.96■□□□□ 0.3
SYNE4-206ENST00000503121 BRD4O60885 1362 aaPredicted RBP16.95■□□□□ 0.3
SYNE4-206ENST00000503121 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
SYNE4-206ENST00000503121 NLRP6P59044 892 aa16.94■□□□□ 0.3
SYNE4-206ENST00000503121 VPS72Q15906 364 aa16.94■□□□□ 0.3
SYNE4-206ENST00000503121 USP6P35125 1406 aa16.94■□□□□ 0.3
SYNE4-206ENST00000503121 KIAA0232Q92628 1395 aa16.93■□□□□ 0.3
SYNE4-206ENST00000503121 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
SYNE4-206ENST00000503121 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
SYNE4-206ENST00000503121 UPF1Q92900 1129 aaKnown RBP eCLIP16.92■□□□□ 0.3
SYNE4-206ENST00000503121 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.91■□□□□ 0.3
SYNE4-206ENST00000503121 GCP02774 474 aa16.91■□□□□ 0.3
SYNE4-206ENST00000503121 TESK2Q96S53 571 aa16.91■□□□□ 0.3
SYNE4-206ENST00000503121 KTN1Q86UP2 1357 aaKnown RBP16.9■□□□□ 0.3
SYNE4-206ENST00000503121 PLCH1Q4KWH8 1693 aa16.9■□□□□ 0.3
SYNE4-206ENST00000503121 USP19O94966 1318 aa16.9■□□□□ 0.3
SYNE4-206ENST00000503121 TTC21BQ7Z4L5 1316 aa16.9■□□□□ 0.3
SYNE4-206ENST00000503121 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
SYNE4-206ENST00000503121 USP47Q96K76 1375 aa16.89■□□□□ 0.3
SYNE4-206ENST00000503121 HDGFL2Q7Z4V5 671 aaPredicted RBP16.89■□□□□ 0.29
SYNE4-206ENST00000503121 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.29
SYNE4-206ENST00000503121 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
SYNE4-206ENST00000503121 COL14A1Q05707 1796 aaKnown RBP16.89■□□□□ 0.29
SYNE4-206ENST00000503121 SSH2Q76I76 1423 aa16.88■□□□□ 0.29
SYNE4-206ENST00000503121 CRYBG1Q9Y4K1 1723 aa16.88■□□□□ 0.29
SYNE4-206ENST00000503121 A0A0G2JS52 829 aa16.88■□□□□ 0.29
SYNE4-206ENST00000503121 ZBTB7CA1YPR0 619 aa16.88■□□□□ 0.29
SYNE4-206ENST00000503121 EVA1CP58658 441 aa16.88■□□□□ 0.29
SYNE4-206ENST00000503121 MYT1Q01538 1121 aa16.88■□□□□ 0.29
SYNE4-206ENST00000503121 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
SYNE4-206ENST00000503121 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
SYNE4-206ENST00000503121 GLI3P10071 1580 aa16.87■□□□□ 0.29
SYNE4-206ENST00000503121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.87■□□□□ 0.29
SYNE4-206ENST00000503121 SEPT12Q8IYM1 358 aa16.87■□□□□ 0.29
SYNE4-206ENST00000503121 TERF2IPQ9NYB0 399 aa16.87■□□□□ 0.29
SYNE4-206ENST00000503121 TTC21AQ8NDW8 1320 aa16.87■□□□□ 0.29
SYNE4-206ENST00000503121 PHRF1Q9P1Y6 1649 aaKnown RBP16.86■□□□□ 0.29
SYNE4-206ENST00000503121 TMF1P82094 1093 aa16.86■□□□□ 0.29
SYNE4-206ENST00000503121 SOX12O15370 315 aa16.85■□□□□ 0.29
SYNE4-206ENST00000503121 ONECUT3O60422 494 aaPredicted RBP16.85■□□□□ 0.29
SYNE4-206ENST00000503121 FAM98CQ17RN3 349 aaKnown RBP16.85■□□□□ 0.29
SYNE4-206ENST00000503121 CPDO75976 1380 aa16.85■□□□□ 0.29
SYNE4-206ENST00000503121 SPATA31A5Q5VU36 1347 aa16.84■□□□□ 0.29
SYNE4-206ENST00000503121 SPATA31A7Q8IWB4 1347 aa16.84■□□□□ 0.29
SYNE4-206ENST00000503121 AKAP12Q02952 1782 aa16.83■□□□□ 0.28
SYNE4-206ENST00000503121 NRKQ7Z2Y5 1582 aa16.83■□□□□ 0.28
SYNE4-206ENST00000503121 KCNH5Q8NCM2 988 aa16.83■□□□□ 0.28
SYNE4-206ENST00000503121 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
SYNE4-206ENST00000503121 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
SYNE4-206ENST00000503121 CD163L1Q9NR16 1453 aa16.81■□□□□ 0.28
SYNE4-206ENST00000503121 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
SYNE4-206ENST00000503121 NME9Q86XW9 330 aa16.81■□□□□ 0.28
SYNE4-206ENST00000503121 ZRANB1Q9UGI0 708 aa16.81■□□□□ 0.28
SYNE4-206ENST00000503121 PIK3C2AO00443 1686 aa16.81■□□□□ 0.28
SYNE4-206ENST00000503121 A0A1W2PP64 1363 aa16.8■□□□□ 0.28
SYNE4-206ENST00000503121 NINLQ9Y2I6 1382 aa16.8■□□□□ 0.28
SYNE4-206ENST00000503121 SPATA31A1Q5TZJ5 1347 aa16.8■□□□□ 0.28
SYNE4-206ENST00000503121 LARP1Q6PKG0 1096 aaKnown RBP16.8■□□□□ 0.28
SYNE4-206ENST00000503121 KRT27Q7Z3Y8 459 aa16.8■□□□□ 0.28
SYNE4-206ENST00000503121 SLIT3O75094 1523 aa16.8■□□□□ 0.28
SYNE4-206ENST00000503121 CAMTA1Q9Y6Y1 1673 aa16.79■□□□□ 0.28
SYNE4-206ENST00000503121 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
SYNE4-206ENST00000503121 AATKQ6ZMQ8 1374 aa16.78■□□□□ 0.28
SYNE4-206ENST00000503121 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
SYNE4-206ENST00000503121 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
SYNE4-206ENST00000503121 CCDC125Q86Z20 511 aa16.77■□□□□ 0.28
SYNE4-206ENST00000503121 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
SYNE4-206ENST00000503121 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
SYNE4-206ENST00000503121 TCP11L2Q8N4U5 519 aa16.75■□□□□ 0.27
SYNE4-206ENST00000503121 AXIN2Q9Y2T1 843 aa16.75■□□□□ 0.27
SYNE4-206ENST00000503121 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
SYNE4-206ENST00000503121 COL5A2P05997 1499 aaPredicted RBP16.74■□□□□ 0.27
SYNE4-206ENST00000503121 CSB-PGBD3P0DP91 1061 aa16.74■□□□□ 0.27
SYNE4-206ENST00000503121 BARGINQ6ZT62 677 aa16.74■□□□□ 0.27
SYNE4-206ENST00000503121 TOM1L2Q6ZVM7 507 aa16.74■□□□□ 0.27
SYNE4-206ENST00000503121 LMO7Q8WWI1 1683 aa16.74■□□□□ 0.27
SYNE4-206ENST00000503121 ANKRD36BQ8N2N9 1353 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms