RNA–Protein interactions for RNA: ENST00000502878.6

HMCES-204, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-204ENST00000502878 TTC21BQ7Z4L5 1316 aa31.96■■■□□ 2.71
HMCES-204ENST00000502878 ORAI2Q96SN7 254 aa31.96■■■□□ 2.71
HMCES-204ENST00000502878 NRKQ7Z2Y5 1582 aa31.95■■■□□ 2.71
HMCES-204ENST00000502878 C1orf167Q5SNV9 1468 aa31.95■■■□□ 2.7
HMCES-204ENST00000502878 FAM9BQ8IZU0 186 aa31.94■■■□□ 2.7
HMCES-204ENST00000502878 SSH2Q76I76 1423 aa31.94■■■□□ 2.7
HMCES-204ENST00000502878 ZRANB1Q9UGI0 708 aa31.93■■■□□ 2.7
HMCES-204ENST00000502878 MST1RQ04912 1400 aa31.92■■■□□ 2.7
HMCES-204ENST00000502878 CADPS2Q86UW7 1296 aa31.92■■■□□ 2.7
HMCES-204ENST00000502878 ANKRD26Q9UPS8 1709 aa31.92■■■□□ 2.7
HMCES-204ENST00000502878 PNISRQ8TF01 805 aaKnown RBP31.91■■■□□ 2.7
HMCES-204ENST00000502878 AEBP2Q6ZN18 517 aaPredicted RBP31.88■■■□□ 2.69
HMCES-204ENST00000502878 TTC21AQ8NDW8 1320 aa31.86■■■□□ 2.69
HMCES-204ENST00000502878 COG3Q96JB2 828 aa31.85■■■□□ 2.69
HMCES-204ENST00000502878 FOXO3O43524 673 aa31.83■■■□□ 2.69
HMCES-204ENST00000502878 MTHFSP49914 203 aa31.83■■■□□ 2.69
HMCES-204ENST00000502878 PSME1Q06323 249 aa31.83■■■□□ 2.69
HMCES-204ENST00000502878 FBLN1P23142 703 aa31.8■■■□□ 2.68
HMCES-204ENST00000502878 PAK3O75914 559 aaPredicted RBP31.79■■■□□ 2.68
HMCES-204ENST00000502878 OVOS2A0A0J9YW53 1432 aa31.79■■■□□ 2.68
HMCES-204ENST00000502878 OVOS2Q6IE36 1432 aa31.79■■■□□ 2.68
HMCES-204ENST00000502878 LTBP4Q8N2S1 1624 aa31.78■■■□□ 2.68
HMCES-204ENST00000502878 KIF1AQ12756 1690 aa31.78■■■□□ 2.68
HMCES-204ENST00000502878 XPCQ01831 940 aaPredicted RBP31.77■■■□□ 2.68
HMCES-204ENST00000502878 SCAF1Q9H7N4 1312 aaKnown RBP31.77■■■□□ 2.68
HMCES-204ENST00000502878 PIK3C2AO00443 1686 aa31.76■■■□□ 2.67
HMCES-204ENST00000502878 SLAIN2Q9P270 581 aa31.74■■■□□ 2.67
HMCES-204ENST00000502878 USP31Q70CQ4 1352 aa31.74■■■□□ 2.67
HMCES-204ENST00000502878 ABTB2Q8N961 1025 aa31.73■■■□□ 2.67
HMCES-204ENST00000502878 NUTM2GQ5VZR2 741 aa31.72■■■□□ 2.67
HMCES-204ENST00000502878 KRT28Q7Z3Y7 464 aa31.72■■■□□ 2.67
HMCES-204ENST00000502878 NLRP6P59044 892 aa31.72■■■□□ 2.67
HMCES-204ENST00000502878 DDX17Q92841 729 aaKnown RBP31.72■■■□□ 2.67
HMCES-204ENST00000502878 POLKQ9UBT6 870 aa31.72■■■□□ 2.67
HMCES-204ENST00000502878 AATKQ6ZMQ8 1374 aa31.71■■■□□ 2.67
HMCES-204ENST00000502878 HNRNPUQ00839 825 aaKnown RBP eCLIP31.7■■■□□ 2.67
HMCES-204ENST00000502878 BRINP3Q76B58 766 aa31.7■■■□□ 2.67
HMCES-204ENST00000502878 CFAP53Q96M91 514 aa31.7■■■□□ 2.66
HMCES-204ENST00000502878 WDR43Q15061 677 aaKnown RBP eCLIP31.68■■■□□ 2.66
HMCES-204ENST00000502878 ADAMTS8Q9UP79 889 aa31.68■■■□□ 2.66
HMCES-204ENST00000502878 EMILIN1Q9Y6C2 1016 aa31.68■■■□□ 2.66
HMCES-204ENST00000502878 RRS1Q15050 365 aaKnown RBP31.67■■■□□ 2.66
HMCES-204ENST00000502878 PPM1GO15355 546 aaPredicted RBP31.66■■■□□ 2.66
HMCES-204ENST00000502878 SOX12O15370 315 aa31.65■■■□□ 2.66
HMCES-204ENST00000502878 NPHP3Q7Z494 1330 aa31.65■■■□□ 2.66
HMCES-204ENST00000502878 TRPM3Q9HCF6 1732 aaPredicted RBP31.65■■■□□ 2.66
HMCES-204ENST00000502878 MAP2P11137 1827 aaKnown RBP31.65■■■□□ 2.66
HMCES-204ENST00000502878 MARF1Q9Y4F3 1742 aaKnown RBP31.63■■■□□ 2.65
HMCES-204ENST00000502878 PNPLA6Q8IY17 1366 aa31.63■■■□□ 2.65
HMCES-204ENST00000502878 SMG6Q86US8 1419 aaKnown RBP31.62■■■□□ 2.65
HMCES-204ENST00000502878 USP54Q70EL1 1684 aa31.62■■■□□ 2.65
HMCES-204ENST00000502878 CENPBP07199 599 aaPredicted RBP31.62■■■□□ 2.65
HMCES-204ENST00000502878 COL3A1P02461 1466 aaPredicted RBP31.62■■■□□ 2.65
HMCES-204ENST00000502878 SHPRHQ149N8 1683 aa31.62■■■□□ 2.65
HMCES-204ENST00000502878 LMOD2Q6P5Q4 547 aa31.6■■■□□ 2.65
HMCES-204ENST00000502878 SENP3-EIF4A1A0A087X0R7 540 aa31.58■■■□□ 2.65
HMCES-204ENST00000502878 PXDNQ92626 1479 aa31.58■■■□□ 2.65
HMCES-204ENST00000502878 INSRP06213 1382 aa31.58■■■□□ 2.65
HMCES-204ENST00000502878 BLMP54132 1417 aaPredicted RBP31.57■■■□□ 2.64
HMCES-204ENST00000502878 SBNO1A3KN83 1393 aa31.57■■■□□ 2.64
HMCES-204ENST00000502878 CDK12Q9NYV4 1490 aaPredicted RBP31.56■■■□□ 2.64
HMCES-204ENST00000502878 DIAPH1O60610 1272 aaKnown RBP31.54■■■□□ 2.64
HMCES-204ENST00000502878 MAP3K19Q56UN5 1328 aa31.54■■■□□ 2.64
HMCES-204ENST00000502878 ALS2Q96Q42 1657 aa31.53■■■□□ 2.64
HMCES-204ENST00000502878 PLEKHG5O94827 1062 aa31.52■■■□□ 2.64
HMCES-204ENST00000502878 NUDCQ9Y266 331 aa31.51■■■□□ 2.63
HMCES-204ENST00000502878 PEAK1Q9H792 1746 aa31.51■■■□□ 2.63
HMCES-204ENST00000502878 TNS3Q68CZ2 1445 aa31.5■■■□□ 2.63
HMCES-204ENST00000502878 CCDC146Q8IYE0 955 aa31.5■■■□□ 2.63
HMCES-204ENST00000502878 SOS2Q07890 1332 aaPredicted RBP31.5■■■□□ 2.63
HMCES-204ENST00000502878 SPATA31A3Q5VYP0 1347 aa31.5■■■□□ 2.63
HMCES-204ENST00000502878 U2SURPO15042 1029 aaKnown RBP31.49■■■□□ 2.63
HMCES-204ENST00000502878 U2AF1L5P0DN76 240 aaPredicted RBP31.49■■■□□ 2.63
HMCES-204ENST00000502878 U2AF1Q01081 240 aaKnown RBP eCLIP31.49■■■□□ 2.63
HMCES-204ENST00000502878 USP19O94966 1318 aa31.49■■■□□ 2.63
HMCES-204ENST00000502878 ZBED9Q6R2W3 1325 aa31.48■■■□□ 2.63
HMCES-204ENST00000502878 NFAT5O94916 1531 aa31.47■■■□□ 2.63
HMCES-204ENST00000502878 KCNH5Q8NCM2 988 aa31.47■■■□□ 2.63
HMCES-204ENST00000502878 SLIT3O75094 1523 aa31.47■■■□□ 2.63
HMCES-204ENST00000502878 IL13P35225 146 aa31.47■■■□□ 2.63
HMCES-204ENST00000502878 HSP90AB2PQ58FF8 381 aa31.47■■■□□ 2.63
HMCES-204ENST00000502878 GCP02774 474 aa31.46■■■□□ 2.63
HMCES-204ENST00000502878 AMPHP49418 695 aa31.45■■■□□ 2.63
HMCES-204ENST00000502878 NHSL1Q5SYE7 1610 aa31.44■■■□□ 2.62
HMCES-204ENST00000502878 FLT4P35916 1363 aa31.44■■■□□ 2.62
HMCES-204ENST00000502878 SALL2Q9Y467 1007 aaPredicted RBP31.43■■■□□ 2.62
HMCES-204ENST00000502878 ROBO1Q9Y6N7 1651 aa31.43■■■□□ 2.62
HMCES-204ENST00000502878 MED1Q15648 1581 aaPredicted RBP31.42■■■□□ 2.62
HMCES-204ENST00000502878 ARHGEF10O15013 1369 aa31.42■■■□□ 2.62
HMCES-204ENST00000502878 EIF4A2Q14240 407 aaKnown RBP31.41■■■□□ 2.62
HMCES-204ENST00000502878 HOXC9P31274 260 aa31.39■■■□□ 2.62
HMCES-204ENST00000502878 KIF24Q5T7B8 1368 aa31.39■■■□□ 2.62
HMCES-204ENST00000502878 CABLES1Q8TDN4 633 aa31.39■■■□□ 2.62
HMCES-204ENST00000502878 ZBTB7CA1YPR0 619 aa31.37■■■□□ 2.61
HMCES-204ENST00000502878 APAF1O14727 1248 aa31.37■■■□□ 2.61
HMCES-204ENST00000502878 RUNDC1Q96C34 613 aa31.37■■■□□ 2.61
HMCES-204ENST00000502878 TOM1O60784 492 aa31.37■■■□□ 2.61
HMCES-204ENST00000502878 LTN1O94822 1766 aa31.37■■■□□ 2.61
HMCES-204ENST00000502878 ARHGEF25Q86VW2 580 aa31.36■■■□□ 2.61
HMCES-204ENST00000502878 RTL1A6NKG5 1358 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 749 ms