RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 TESK2Q96S53 571 aa36.26■■■■□ 3.4
PROM1-202ENST00000502501 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.25■■■■□ 3.39
PROM1-202ENST00000502501 SOCS7O14512 581 aa36.25■■■■□ 3.39
PROM1-202ENST00000502501 CABP1Q9NZU7 370 aa36.25■■■■□ 3.39
PROM1-202ENST00000502501 AKAP12Q02952 1782 aa36.25■■■■□ 3.39
PROM1-202ENST00000502501 USP6P35125 1406 aa36.25■■■■□ 3.39
PROM1-202ENST00000502501 CDK12Q9NYV4 1490 aaPredicted RBP36.23■■■■□ 3.39
PROM1-202ENST00000502501 SLIT2O94813 1529 aa36.23■■■■□ 3.39
PROM1-202ENST00000502501 ST20-MTHFSA0A0A6YYL1 179 aa36.22■■■■□ 3.39
PROM1-202ENST00000502501 LMOD2Q6P5Q4 547 aa36.22■■■■□ 3.39
PROM1-202ENST00000502501 SSH2Q76I76 1423 aa36.22■■■■□ 3.39
PROM1-202ENST00000502501 NWD2Q9ULI1 1742 aa36.2■■■■□ 3.39
PROM1-202ENST00000502501 CPSF1Q10570 1443 aaKnown RBP36.2■■■■□ 3.39
PROM1-202ENST00000502501 PHRF1Q9P1Y6 1649 aaKnown RBP36.19■■■■□ 3.38
PROM1-202ENST00000502501 BCL9LQ86UU0 1499 aa36.19■■■■□ 3.38
PROM1-202ENST00000502501 PAK3O75914 559 aaPredicted RBP36.19■■■■□ 3.38
PROM1-202ENST00000502501 ZNF692Q9BU19 519 aaPredicted RBP36.18■■■■□ 3.38
PROM1-202ENST00000502501 NRKQ7Z2Y5 1582 aa36.18■■■■□ 3.38
PROM1-202ENST00000502501 NINLQ9Y2I6 1382 aa36.16■■■■□ 3.38
PROM1-202ENST00000502501 HAP1P54257 671 aaPredicted RBP36.16■■■■□ 3.38
PROM1-202ENST00000502501 CABLES1Q8TDN4 633 aa36.16■■■■□ 3.38
PROM1-202ENST00000502501 USP21Q9UK80 565 aa36.16■■■■□ 3.38
PROM1-202ENST00000502501 MON2Q7Z3U7 1717 aa36.16■■■■□ 3.38
PROM1-202ENST00000502501 ATRNO75882 1429 aa36.16■■■■□ 3.38
PROM1-202ENST00000502501 PLCH1Q4KWH8 1693 aa36.15■■■■□ 3.38
PROM1-202ENST00000502501 COL14A1Q05707 1796 aaKnown RBP36.13■■■■□ 3.37
PROM1-202ENST00000502501 TRPC5Q9UL62 973 aaPredicted RBP36.12■■■■□ 3.37
PROM1-202ENST00000502501 CD163L1Q9NR16 1453 aa36.11■■■■□ 3.37
PROM1-202ENST00000502501 USP19O94966 1318 aa36.11■■■■□ 3.37
PROM1-202ENST00000502501 RXRBP28702 533 aa36.11■■■■□ 3.37
PROM1-202ENST00000502501 RBM6P78332 1123 aaKnown RBP36.1■■■■□ 3.37
PROM1-202ENST00000502501 QTRT2Q9H974 415 aaKnown RBP36.1■■■■□ 3.37
PROM1-202ENST00000502501 PIK3C2AO00443 1686 aa36.1■■■■□ 3.37
PROM1-202ENST00000502501 ABTB2Q8N961 1025 aa36.09■■■■□ 3.37
PROM1-202ENST00000502501 TTC21AQ8NDW8 1320 aa36.07■■■■□ 3.36
PROM1-202ENST00000502501 UNC5CLQ8IV45 518 aa36.06■■■■□ 3.36
PROM1-202ENST00000502501 SLIT3O75094 1523 aa36.05■■■■□ 3.36
PROM1-202ENST00000502501 TMF1P82094 1093 aa36.05■■■■□ 3.36
PROM1-202ENST00000502501 NRAPQ86VF7 1730 aa36.05■■■■□ 3.36
PROM1-202ENST00000502501 KTN1Q86UP2 1357 aaKnown RBP36.04■■■■□ 3.36
PROM1-202ENST00000502501 NLRP13Q86W25 1043 aa36.04■■■■□ 3.36
PROM1-202ENST00000502501 USP54Q70EL1 1684 aa36.03■■■■□ 3.36
PROM1-202ENST00000502501 CPDO75976 1380 aa36.02■■■■□ 3.36
PROM1-202ENST00000502501 TTC21BQ7Z4L5 1316 aa36.02■■■■□ 3.36
PROM1-202ENST00000502501 FAM83GA6ND36 823 aa36.01■■■■□ 3.36
PROM1-202ENST00000502501 CDCA8Q53HL2 280 aa36.01■■■■□ 3.36
PROM1-202ENST00000502501 TERF2IPQ9NYB0 399 aa35.99■■■■□ 3.35
PROM1-202ENST00000502501 RGS12O14924 1447 aa35.98■■■■□ 3.35
PROM1-202ENST00000502501 EDC4Q6P2E9 1401 aaKnown RBP35.98■■■■□ 3.35
PROM1-202ENST00000502501 HDGFL2Q7Z4V5 671 aaPredicted RBP35.97■■■■□ 3.35
PROM1-202ENST00000502501 A0A1W2PP64 1363 aa35.97■■■■□ 3.35
PROM1-202ENST00000502501 KIAA0232Q92628 1395 aa35.97■■■■□ 3.35
PROM1-202ENST00000502501 TMC1Q8TDI8 760 aa35.96■■■■□ 3.35
PROM1-202ENST00000502501 SLC12A5Q9H2X9 1139 aa35.96■■■■□ 3.35
PROM1-202ENST00000502501 PLEKHG5O94827 1062 aa35.95■■■■□ 3.35
PROM1-202ENST00000502501 VPS72Q15906 364 aa35.95■■■■□ 3.35
PROM1-202ENST00000502501 NUTM2GQ5VZR2 741 aa35.95■■■■□ 3.35
PROM1-202ENST00000502501 PRDM11Q9NQV5 511 aa35.95■■■■□ 3.35
PROM1-202ENST00000502501 GLI3P10071 1580 aa35.94■■■■□ 3.34
PROM1-202ENST00000502501 GJD4Q96KN9 370 aaPredicted RBP35.94■■■■□ 3.34
PROM1-202ENST00000502501 LMO7Q8WWI1 1683 aa35.94■■■■□ 3.34
PROM1-202ENST00000502501 USP31Q70CQ4 1352 aa35.93■■■■□ 3.34
PROM1-202ENST00000502501 GCP02774 474 aa35.92■■■■□ 3.34
PROM1-202ENST00000502501 NLRP6P59044 892 aa35.92■■■■□ 3.34
PROM1-202ENST00000502501 ANKRD36BQ8N2N9 1353 aa35.91■■■■□ 3.34
PROM1-202ENST00000502501 EIF4G2P78344 907 aaKnown RBP eCLIP35.9■■■■□ 3.34
PROM1-202ENST00000502501 BTG4Q9NY30 223 aa35.9■■■■□ 3.34
PROM1-202ENST00000502501 MYOM1P52179 1685 aa35.88■■■■□ 3.33
PROM1-202ENST00000502501 NFAT5O94916 1531 aa35.85■■■■□ 3.33
PROM1-202ENST00000502501 ABCC6O95255 1503 aa35.85■■■■□ 3.33
PROM1-202ENST00000502501 KCNH5Q8NCM2 988 aa35.85■■■■□ 3.33
PROM1-202ENST00000502501 ZC3H6P61129 1189 aaKnown RBP35.84■■■■□ 3.33
PROM1-202ENST00000502501 AATKQ6ZMQ8 1374 aa35.82■■■■□ 3.32
PROM1-202ENST00000502501 CAMTA1Q9Y6Y1 1673 aa35.81■■■■□ 3.32
PROM1-202ENST00000502501 ONECUT3O60422 494 aaPredicted RBP35.81■■■■□ 3.32
PROM1-202ENST00000502501 OVOS2A0A0J9YW53 1432 aa35.81■■■■□ 3.32
PROM1-202ENST00000502501 OVOS2Q6IE36 1432 aa35.81■■■■□ 3.32
PROM1-202ENST00000502501 COL18A1P39060 1754 aa35.79■■■■□ 3.32
PROM1-202ENST00000502501 HSPA5P11021 654 aaKnown RBP35.78■■■■□ 3.32
PROM1-202ENST00000502501 CHRNA2Q15822 529 aa35.78■■■■□ 3.32
PROM1-202ENST00000502501 EP400Q96L91 3159 aa35.78■■■■□ 3.32
PROM1-202ENST00000502501 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.77■■■■□ 3.32
PROM1-202ENST00000502501 SPATA31A5Q5VU36 1347 aa35.77■■■■□ 3.32
PROM1-202ENST00000502501 SPATA31A7Q8IWB4 1347 aa35.77■■■■□ 3.32
PROM1-202ENST00000502501 COL5A2P05997 1499 aaPredicted RBP35.75■■■■□ 3.31
PROM1-202ENST00000502501 NME9Q86XW9 330 aa35.75■■■■□ 3.31
PROM1-202ENST00000502501 ARHGEF25Q86VW2 580 aa35.73■■■■□ 3.31
PROM1-202ENST00000502501 THSD7AQ9UPZ6 1657 aa35.71■■■■□ 3.31
PROM1-202ENST00000502501 CCDC9Q9Y3X0 531 aaKnown RBP35.7■■■■□ 3.31
PROM1-202ENST00000502501 SPATA31A1Q5TZJ5 1347 aa35.69■■■■□ 3.3
PROM1-202ENST00000502501 ZRANB1Q9UGI0 708 aa35.66■■■■□ 3.3
PROM1-202ENST00000502501 KIF20BQ96Q89 1820 aa35.65■■■■□ 3.3
PROM1-202ENST00000502501 LTN1O94822 1766 aa35.65■■■■□ 3.3
PROM1-202ENST00000502501 BRWD3Q6RI45 1802 aa35.64■■■■□ 3.3
PROM1-202ENST00000502501 SEPT12Q8IYM1 358 aa35.63■■■■□ 3.29
PROM1-202ENST00000502501 STRN4Q9NRL3 753 aa35.63■■■■□ 3.29
PROM1-202ENST00000502501 CRB1P82279 1406 aa35.63■■■■□ 3.29
PROM1-202ENST00000502501 EVA1CP58658 441 aa35.62■■■■□ 3.29
PROM1-202ENST00000502501 UPF1Q92900 1129 aaKnown RBP eCLIP35.61■■■■□ 3.29
PROM1-202ENST00000502501 BARGINQ6ZT62 677 aa35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms