RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
ATXN3-206ENST00000502250 COG6Q9Y2V7 657 aa12.19□□□□□ -0.46
ATXN3-206ENST00000502250 GPR37L1O60883 481 aa12.18□□□□□ -0.46
ATXN3-206ENST00000502250 TBC1D2BQ9UPU7 963 aa12.18□□□□□ -0.46
ATXN3-206ENST00000502250 A6NJR5 290 aa12.17□□□□□ -0.46
ATXN3-206ENST00000502250 TRIM32Q13049 653 aa12.17□□□□□ -0.46
ATXN3-206ENST00000502250 EMID1Q96A84 441 aaPredicted RBP12.17□□□□□ -0.46
ATXN3-206ENST00000502250 RGS20O76081 388 aa12.16□□□□□ -0.46
ATXN3-206ENST00000502250 GDPD2Q9HCC8 539 aa12.16□□□□□ -0.46
ATXN3-206ENST00000502250 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
ATXN3-206ENST00000502250 SLC19A1P41440 591 aa12.15□□□□□ -0.46
ATXN3-206ENST00000502250 LIAT1Q6ZQX7 453 aa12.15□□□□□ -0.46
ATXN3-206ENST00000502250 C14orf37Q86TY3 774 aa12.15□□□□□ -0.46
ATXN3-206ENST00000502250 POM121Q96HA1 1249 aa12.15□□□□□ -0.46
ATXN3-206ENST00000502250 GPSM3Q9Y4H4 160 aa12.15□□□□□ -0.46
ATXN3-206ENST00000502250 CD2BP2O95400 341 aaKnown RBP12.14□□□□□ -0.47
ATXN3-206ENST00000502250 WNT7BP56706 349 aa12.14□□□□□ -0.47
ATXN3-206ENST00000502250 PDXDC2PQ6P474 469 aa12.14□□□□□ -0.47
ATXN3-206ENST00000502250 ZNF511Q8NB15 262 aa12.13□□□□□ -0.47
ATXN3-206ENST00000502250 BAP1Q92560 729 aa12.12□□□□□ -0.47
ATXN3-206ENST00000502250 SH3BP5LQ7L8J4 393 aa12.11□□□□□ -0.47
ATXN3-206ENST00000502250 WWC1Q8IX03 1113 aa12.11□□□□□ -0.47
ATXN3-206ENST00000502250 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
ATXN3-206ENST00000502250 ZMYND15Q9H091 742 aa12.11□□□□□ -0.47
ATXN3-206ENST00000502250 ABL2P42684 1182 aa12.1□□□□□ -0.47
ATXN3-206ENST00000502250 IRF5Q13568 498 aa12.1□□□□□ -0.47
ATXN3-206ENST00000502250 SPRYD7Q5W111 196 aa12.1□□□□□ -0.47
ATXN3-206ENST00000502250 PRKD2Q9BZL6 878 aa12.1□□□□□ -0.47
ATXN3-206ENST00000502250 SH3BP2P78314 561 aa12.09□□□□□ -0.47
ATXN3-206ENST00000502250 PTK2Q05397 1052 aa12.09□□□□□ -0.47
ATXN3-206ENST00000502250 BPHLQ86WA6 291 aaPredicted RBP12.09□□□□□ -0.47
ATXN3-206ENST00000502250 PROSER2Q86WR7 435 aaPredicted RBP12.09□□□□□ -0.47
ATXN3-206ENST00000502250 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
ATXN3-206ENST00000502250 LINC01559Q495D7 138 aa12.08□□□□□ -0.48
ATXN3-206ENST00000502250 SH3RF1Q7Z6J0 888 aa12.08□□□□□ -0.48
ATXN3-206ENST00000502250 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
ATXN3-206ENST00000502250 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
ATXN3-206ENST00000502250 ZBBXA8MT70 800 aa12.07□□□□□ -0.48
ATXN3-206ENST00000502250 SKOR1P84550 965 aa12.07□□□□□ -0.48
ATXN3-206ENST00000502250 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
ATXN3-206ENST00000502250 NR1H3Q13133 447 aa12.05□□□□□ -0.48
ATXN3-206ENST00000502250 ARHGAP9Q9BRR9 750 aa12.05□□□□□ -0.48
ATXN3-206ENST00000502250 FBXO45P0C2W1 286 aa12.04□□□□□ -0.48
ATXN3-206ENST00000502250 FOXJ1Q92949 421 aa12.04□□□□□ -0.48
ATXN3-206ENST00000502250 WNT7AO00755 349 aa12.03□□□□□ -0.48
ATXN3-206ENST00000502250 ZNF697Q5TEC3 545 aa12.03□□□□□ -0.48
ATXN3-206ENST00000502250 OCSTAMPQ9BR26 566 aa12.03□□□□□ -0.48
ATXN3-206ENST00000502250 C1QTNF2Q9BXJ5 285 aa12.03□□□□□ -0.48
ATXN3-206ENST00000502250 VARSP26640 1264 aaKnown RBP12.02□□□□□ -0.49
ATXN3-206ENST00000502250 RC3H1Q5TC82 1133 aaKnown RBP12.02□□□□□ -0.49
ATXN3-206ENST00000502250 ZNF592Q92610 1267 aa12.02□□□□□ -0.49
ATXN3-206ENST00000502250 TRAK2O60296 914 aa12.01□□□□□ -0.49
ATXN3-206ENST00000502250 AGERQ15109 404 aa12.01□□□□□ -0.49
ATXN3-206ENST00000502250 C4orf48Q5BLP8 95 aa12.01□□□□□ -0.49
ATXN3-206ENST00000502250 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
ATXN3-206ENST00000502250 TRMT44Q8IYL2 757 aaKnown RBP12□□□□□ -0.49
ATXN3-206ENST00000502250 ADAM32Q8TC27 787 aa12□□□□□ -0.49
ATXN3-206ENST00000502250 SOX11P35716 441 aa11.99□□□□□ -0.49
ATXN3-206ENST00000502250 ZBTB33Q86T24 672 aa11.99□□□□□ -0.49
ATXN3-206ENST00000502250 EHBP1Q8NDI1 1231 aa11.99□□□□□ -0.49
ATXN3-206ENST00000502250 MAGEB6P1A0A0J9YX57 407 aa11.98□□□□□ -0.49
ATXN3-206ENST00000502250 MCCD1P59942 119 aaPredicted RBP11.98□□□□□ -0.49
ATXN3-206ENST00000502250 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
ATXN3-206ENST00000502250 MPNDQ8N594 471 aa11.98□□□□□ -0.49
ATXN3-206ENST00000502250 FAM174AQ8TBP5 190 aa11.98□□□□□ -0.49
ATXN3-206ENST00000502250 EIF4G2P78344 907 aaKnown RBP eCLIP11.97□□□□□ -0.49
ATXN3-206ENST00000502250 VAC14Q08AM6 782 aa11.97□□□□□ -0.49
ATXN3-206ENST00000502250 CARD14Q9BXL6 1004 aa11.97□□□□□ -0.49
ATXN3-206ENST00000502250 PKD2L1Q9P0L9 805 aa11.97□□□□□ -0.49
ATXN3-206ENST00000502250 PRR20EP86478 221 aa11.95□□□□□ -0.5
ATXN3-206ENST00000502250 PRR20CP86479 221 aa11.95□□□□□ -0.5
ATXN3-206ENST00000502250 PRR20DP86480 221 aa11.95□□□□□ -0.5
ATXN3-206ENST00000502250 PRR20BP86481 221 aa11.95□□□□□ -0.5
ATXN3-206ENST00000502250 PRR20AP86496 221 aa11.95□□□□□ -0.5
ATXN3-206ENST00000502250 MRGPRX2Q96LB1 330 aa11.95□□□□□ -0.5
ATXN3-206ENST00000502250 CDV3Q9UKY7 258 aaKnown RBP11.95□□□□□ -0.5
ATXN3-206ENST00000502250 MAP4K5Q9Y4K4 846 aa11.95□□□□□ -0.5
ATXN3-206ENST00000502250 SIAH2O43255 324 aa11.94□□□□□ -0.5
ATXN3-206ENST00000502250 GDF9O60383 454 aa11.94□□□□□ -0.5
ATXN3-206ENST00000502250 SLC10A4Q96EP9 437 aa11.94□□□□□ -0.5
ATXN3-206ENST00000502250 CDK15Q96Q40 435 aa11.93□□□□□ -0.5
ATXN3-206ENST00000502250 POM121CA8CG34 1229 aa11.91□□□□□ -0.5
ATXN3-206ENST00000502250 FOXC1Q12948 553 aa11.91□□□□□ -0.5
ATXN3-206ENST00000502250 TRIM67Q6ZTA4 783 aa11.91□□□□□ -0.5
ATXN3-206ENST00000502250 DZIP3Q86Y13 1208 aaKnown RBP11.91□□□□□ -0.5
ATXN3-206ENST00000502250 ALG2Q9H553 416 aa11.91□□□□□ -0.5
ATXN3-206ENST00000502250 PCDHB9Q9Y5E1 797 aa11.91□□□□□ -0.5
ATXN3-206ENST00000502250 NBPF20Q3BBV1 942 aa11.9□□□□□ -0.5
ATXN3-206ENST00000502250 SNIP1Q8TAD8 396 aaKnown RBP11.89□□□□□ -0.51
ATXN3-206ENST00000502250 SEMA3FQ13275 785 aa11.88□□□□□ -0.51
ATXN3-206ENST00000502250 ADAMTS19Q8TE59 1207 aa11.87□□□□□ -0.51
ATXN3-206ENST00000502250 TOR4AQ9NXH8 423 aa11.87□□□□□ -0.51
ATXN3-206ENST00000502250 TLL2Q9Y6L7 1015 aa11.87□□□□□ -0.51
ATXN3-206ENST00000502250 GLMNQ92990 594 aa11.86□□□□□ -0.51
ATXN3-206ENST00000502250 ZNF777Q9ULD5 760 aaPredicted RBP11.86□□□□□ -0.51
ATXN3-206ENST00000502250 ESPNB1AK53 854 aa11.85□□□□□ -0.51
ATXN3-206ENST00000502250 TNFRSF10AO00220 468 aa11.85□□□□□ -0.51
ATXN3-206ENST00000502250 ADH1CP00326 375 aa11.85□□□□□ -0.51
ATXN3-206ENST00000502250 VASH1Q7L8A9 365 aaPredicted RBP11.85□□□□□ -0.51
ATXN3-206ENST00000502250 CCDC125Q86Z20 511 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms