RNA–Protein interactions for RNA: ENST00000500401.2

SPCS2P3-201, Transcript of signal peptidase complex subunit 2 pseudogene 3, humanhuman

BASIC

Gene SPCS2P3, Length 656 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2P3-201ENST00000500401 ST20-MTHFSA0A0A6YYL1 179 aa34.24■■■■□ 3.07
SPCS2P3-201ENST00000500401 TESK2Q96S53 571 aa34.23■■■■□ 3.07
SPCS2P3-201ENST00000500401 FNBP4Q8N3X1 1017 aaPredicted RBP34.21■■■■□ 3.07
SPCS2P3-201ENST00000500401 USP47Q96K76 1375 aa34.2■■■■□ 3.07
SPCS2P3-201ENST00000500401 NUTM2GQ5VZR2 741 aa34.18■■■■□ 3.06
SPCS2P3-201ENST00000500401 HAP1P54257 671 aaPredicted RBP34.17■■■■□ 3.06
SPCS2P3-201ENST00000500401 BCL9LQ86UU0 1499 aa34.17■■■■□ 3.06
SPCS2P3-201ENST00000500401 USP21Q9UK80 565 aa34.17■■■■□ 3.06
SPCS2P3-201ENST00000500401 AKAP12Q02952 1782 aa34.16■■■■□ 3.06
SPCS2P3-201ENST00000500401 USP6P35125 1406 aa34.16■■■■□ 3.06
SPCS2P3-201ENST00000500401 ATAD2Q6PL18 1390 aa34.16■■■■□ 3.06
SPCS2P3-201ENST00000500401 QTRT2Q9H974 415 aaKnown RBP34.15■■■■□ 3.06
SPCS2P3-201ENST00000500401 SLIT2O94813 1529 aa34.14■■■■□ 3.06
SPCS2P3-201ENST00000500401 PHRF1Q9P1Y6 1649 aaKnown RBP34.14■■■■□ 3.06
SPCS2P3-201ENST00000500401 SSH2Q76I76 1423 aa34.13■■■■□ 3.05
SPCS2P3-201ENST00000500401 PLCH1Q4KWH8 1693 aa34.12■■■■□ 3.05
SPCS2P3-201ENST00000500401 RXRBP28702 533 aa34.1■■■■□ 3.05
SPCS2P3-201ENST00000500401 ATRNO75882 1429 aa34.1■■■■□ 3.05
SPCS2P3-201ENST00000500401 CPSF1Q10570 1443 aaKnown RBP34.1■■■■□ 3.05
SPCS2P3-201ENST00000500401 CD163L1Q9NR16 1453 aa34.09■■■■□ 3.05
SPCS2P3-201ENST00000500401 ABTB2Q8N961 1025 aa34.09■■■■□ 3.05
SPCS2P3-201ENST00000500401 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.08■■■■□ 3.05
SPCS2P3-201ENST00000500401 FAM83GA6ND36 823 aa34.08■■■■□ 3.05
SPCS2P3-201ENST00000500401 NRKQ7Z2Y5 1582 aa34.07■■■■□ 3.05
SPCS2P3-201ENST00000500401 MON2Q7Z3U7 1717 aa34.06■■■■□ 3.04
SPCS2P3-201ENST00000500401 PIK3C2AO00443 1686 aa34.06■■■■□ 3.04
SPCS2P3-201ENST00000500401 SLC12A5Q9H2X9 1139 aa34.05■■■■□ 3.04
SPCS2P3-201ENST00000500401 TRPC5Q9UL62 973 aaPredicted RBP34.05■■■■□ 3.04
SPCS2P3-201ENST00000500401 BRD4O60885 1362 aaPredicted RBP34.04■■■■□ 3.04
SPCS2P3-201ENST00000500401 RBM6P78332 1123 aaKnown RBP34.04■■■■□ 3.04
SPCS2P3-201ENST00000500401 CDK12Q9NYV4 1490 aaPredicted RBP34.03■■■■□ 3.04
SPCS2P3-201ENST00000500401 TMC1Q8TDI8 760 aa34.03■■■■□ 3.04
SPCS2P3-201ENST00000500401 UPF1Q92900 1129 aaKnown RBP eCLIP34.03■■■■□ 3.04
SPCS2P3-201ENST00000500401 NWD2Q9ULI1 1742 aa34.03■■■■□ 3.04
SPCS2P3-201ENST00000500401 USP19O94966 1318 aa34.03■■■■□ 3.04
SPCS2P3-201ENST00000500401 UNC5CLQ8IV45 518 aa34.02■■■■□ 3.04
SPCS2P3-201ENST00000500401 RGS12O14924 1447 aa34.02■■■■□ 3.04
SPCS2P3-201ENST00000500401 TTC21BQ7Z4L5 1316 aa34.02■■■■□ 3.04
SPCS2P3-201ENST00000500401 COL14A1Q05707 1796 aaKnown RBP34.01■■■■□ 3.04
SPCS2P3-201ENST00000500401 PUS7Q96PZ0 661 aaKnown RBP34.01■■■■□ 3.03
SPCS2P3-201ENST00000500401 ZNF692Q9BU19 519 aaPredicted RBP34.01■■■■□ 3.03
SPCS2P3-201ENST00000500401 NRAPQ86VF7 1730 aa34.01■■■■□ 3.03
SPCS2P3-201ENST00000500401 KTN1Q86UP2 1357 aaKnown RBP34■■■■□ 3.03
SPCS2P3-201ENST00000500401 KIAA0232Q92628 1395 aa33.99■■■■□ 3.03
SPCS2P3-201ENST00000500401 ZC3H6P61129 1189 aaKnown RBP33.98■■■■□ 3.03
SPCS2P3-201ENST00000500401 NLRP13Q86W25 1043 aa33.97■■■■□ 3.03
SPCS2P3-201ENST00000500401 GLI3P10071 1580 aa33.97■■■■□ 3.03
SPCS2P3-201ENST00000500401 NLRP6P59044 892 aa33.95■■■■□ 3.03
SPCS2P3-201ENST00000500401 CHRNA2Q15822 529 aa33.95■■■■□ 3.03
SPCS2P3-201ENST00000500401 BTG4Q9NY30 223 aa33.95■■■■□ 3.03
SPCS2P3-201ENST00000500401 A0A1W2PP64 1363 aa33.95■■■■□ 3.02
SPCS2P3-201ENST00000500401 SLIT3O75094 1523 aa33.94■■■■□ 3.02
SPCS2P3-201ENST00000500401 TMF1P82094 1093 aa33.94■■■■□ 3.02
SPCS2P3-201ENST00000500401 GJD4Q96KN9 370 aaPredicted RBP33.94■■■■□ 3.02
SPCS2P3-201ENST00000500401 PRDM11Q9NQV5 511 aa33.94■■■■□ 3.02
SPCS2P3-201ENST00000500401 GCP02774 474 aa33.92■■■■□ 3.02
SPCS2P3-201ENST00000500401 ZRANB1Q9UGI0 708 aa33.91■■■■□ 3.02
SPCS2P3-201ENST00000500401 TTC21AQ8NDW8 1320 aa33.9■■■■□ 3.02
SPCS2P3-201ENST00000500401 SLC24A1O60721 1099 aa33.9■■■■□ 3.02
SPCS2P3-201ENST00000500401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.9■■■■□ 3.02
SPCS2P3-201ENST00000500401 VPS72Q15906 364 aa33.89■■■■□ 3.02
SPCS2P3-201ENST00000500401 HDGFL2Q7Z4V5 671 aaPredicted RBP33.88■■■■□ 3.01
SPCS2P3-201ENST00000500401 HSPA5P11021 654 aaKnown RBP33.87■■■■□ 3.01
SPCS2P3-201ENST00000500401 CPDO75976 1380 aa33.86■■■■□ 3.01
SPCS2P3-201ENST00000500401 NME9Q86XW9 330 aa33.86■■■■□ 3.01
SPCS2P3-201ENST00000500401 LMO7Q8WWI1 1683 aa33.86■■■■□ 3.01
SPCS2P3-201ENST00000500401 NINLQ9Y2I6 1382 aa33.85■■■■□ 3.01
SPCS2P3-201ENST00000500401 TERF2IPQ9NYB0 399 aa33.85■■■■□ 3.01
SPCS2P3-201ENST00000500401 EDC4Q6P2E9 1401 aaKnown RBP33.85■■■■□ 3.01
SPCS2P3-201ENST00000500401 MYOM1P52179 1685 aa33.84■■■■□ 3.01
SPCS2P3-201ENST00000500401 CAMTA1Q9Y6Y1 1673 aa33.84■■■■□ 3.01
SPCS2P3-201ENST00000500401 USP54Q70EL1 1684 aa33.83■■■■□ 3.01
SPCS2P3-201ENST00000500401 EIF4G2P78344 907 aaKnown RBP eCLIP33.82■■■■□ 3
SPCS2P3-201ENST00000500401 CCDC9Q9Y3X0 531 aaKnown RBP33.82■■■■□ 3
SPCS2P3-201ENST00000500401 SOX12O15370 315 aa33.8■■■■□ 3
SPCS2P3-201ENST00000500401 USP31Q70CQ4 1352 aa33.8■■■■□ 3
SPCS2P3-201ENST00000500401 NFAT5O94916 1531 aa33.79■■■■□ 3
SPCS2P3-201ENST00000500401 ANKRD36BQ8N2N9 1353 aa33.79■■■■□ 3
SPCS2P3-201ENST00000500401 COL18A1P39060 1754 aa33.78■■■■□ 3
SPCS2P3-201ENST00000500401 ZBTB7CA1YPR0 619 aa33.78■■■■□ 3
SPCS2P3-201ENST00000500401 STRN4Q9NRL3 753 aa33.77■■■■□ 3
SPCS2P3-201ENST00000500401 BRWD3Q6RI45 1802 aa33.76■■■■□ 3
SPCS2P3-201ENST00000500401 CDCA8Q53HL2 280 aa33.75■■■□□ 2.99
SPCS2P3-201ENST00000500401 SPATA31A5Q5VU36 1347 aa33.75■■■□□ 2.99
SPCS2P3-201ENST00000500401 SPATA31A7Q8IWB4 1347 aa33.75■■■□□ 2.99
SPCS2P3-201ENST00000500401 OVOS2A0A0J9YW53 1432 aa33.73■■■□□ 2.99
SPCS2P3-201ENST00000500401 OVOS2Q6IE36 1432 aa33.73■■■□□ 2.99
SPCS2P3-201ENST00000500401 ARHGEF25Q86VW2 580 aa33.72■■■□□ 2.99
SPCS2P3-201ENST00000500401 ONECUT3O60422 494 aaPredicted RBP33.71■■■□□ 2.99
SPCS2P3-201ENST00000500401 KCNH5Q8NCM2 988 aa33.71■■■□□ 2.99
SPCS2P3-201ENST00000500401 AATKQ6ZMQ8 1374 aa33.71■■■□□ 2.99
SPCS2P3-201ENST00000500401 COL5A2P05997 1499 aaPredicted RBP33.7■■■□□ 2.99
SPCS2P3-201ENST00000500401 RGPD5Q99666 1765 aa33.7■■■□□ 2.99
SPCS2P3-201ENST00000500401 FAM98CQ17RN3 349 aaKnown RBP33.7■■■□□ 2.99
SPCS2P3-201ENST00000500401 SEPT12Q8IYM1 358 aa33.7■■■□□ 2.99
SPCS2P3-201ENST00000500401 AXIN2Q9Y2T1 843 aa33.7■■■□□ 2.99
SPCS2P3-201ENST00000500401 LARP1Q6PKG0 1096 aaKnown RBP33.69■■■□□ 2.98
SPCS2P3-201ENST00000500401 SPATA31A1Q5TZJ5 1347 aa33.69■■■□□ 2.98
SPCS2P3-201ENST00000500401 C11orf95C9JLR9 678 aaPredicted RBP33.68■■■□□ 2.98
SPCS2P3-201ENST00000500401 POLR3GLQ9BT43 218 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms