RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 NUDT16Q96DE0 195 aaKnown RBP16■□□□□ 0.15
LSAMP-206ENST00000498645 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
LSAMP-206ENST00000498645 SEPT12Q8IYM1 358 aa15.99■□□□□ 0.15
LSAMP-206ENST00000498645 CDK19Q9BWU1 502 aa15.99■□□□□ 0.15
LSAMP-206ENST00000498645 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
LSAMP-206ENST00000498645 NBPF1Q3BBV0 1214 aa15.98■□□□□ 0.15
LSAMP-206ENST00000498645 CCDC125Q86Z20 511 aa15.97■□□□□ 0.15
LSAMP-206ENST00000498645 PHRF1Q9P1Y6 1649 aaKnown RBP15.97■□□□□ 0.15
LSAMP-206ENST00000498645 NUTM2GQ5VZR2 741 aa15.96■□□□□ 0.15
LSAMP-206ENST00000498645 QRICH2Q9H0J4 1663 aa15.95■□□□□ 0.14
LSAMP-206ENST00000498645 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
LSAMP-206ENST00000498645 FAM98CQ17RN3 349 aaKnown RBP15.95■□□□□ 0.14
LSAMP-206ENST00000498645 PRDM11Q9NQV5 511 aa15.95■□□□□ 0.14
LSAMP-206ENST00000498645 ACEP12821 1306 aa15.94■□□□□ 0.14
LSAMP-206ENST00000498645 KRT27Q7Z3Y8 459 aa15.94■□□□□ 0.14
LSAMP-206ENST00000498645 ZRANB1Q9UGI0 708 aa15.94■□□□□ 0.14
LSAMP-206ENST00000498645 SRCAPQ6ZRS2 3230 aa15.94■□□□□ 0.14
LSAMP-206ENST00000498645 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
LSAMP-206ENST00000498645 SF3B2Q13435 895 aaKnown RBP15.93■□□□□ 0.14
LSAMP-206ENST00000498645 CENPJQ9HC77 1338 aaPredicted RBP15.93■□□□□ 0.14
LSAMP-206ENST00000498645 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
LSAMP-206ENST00000498645 CHRNA2Q15822 529 aa15.92■□□□□ 0.14
LSAMP-206ENST00000498645 DEFB132Q7Z7B7 95 aa15.92■□□□□ 0.14
LSAMP-206ENST00000498645 CCDC61Q9Y6R9 512 aa15.92■□□□□ 0.14
LSAMP-206ENST00000498645 POLR3AO14802 1390 aaPredicted RBP15.91■□□□□ 0.14
LSAMP-206ENST00000498645 ONECUT3O60422 494 aaPredicted RBP15.91■□□□□ 0.14
LSAMP-206ENST00000498645 ZC3H6P61129 1189 aaKnown RBP15.91■□□□□ 0.14
LSAMP-206ENST00000498645 NEUROD1Q13562 356 aa15.9■□□□□ 0.14
LSAMP-206ENST00000498645 NBPF8Q3BBV2 869 aa15.9■□□□□ 0.14
LSAMP-206ENST00000498645 L3MBTL2Q969R5 705 aa15.9■□□□□ 0.14
LSAMP-206ENST00000498645 SIN3AQ96ST3 1273 aa15.9■□□□□ 0.14
LSAMP-206ENST00000498645 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
LSAMP-206ENST00000498645 STRN4Q9NRL3 753 aa15.9■□□□□ 0.14
LSAMP-206ENST00000498645 PPIP5K1Q6PFW1 1433 aa15.9■□□□□ 0.14
LSAMP-206ENST00000498645 SPATA31A5Q5VU36 1347 aa15.9■□□□□ 0.14
LSAMP-206ENST00000498645 SPATA31A7Q8IWB4 1347 aa15.9■□□□□ 0.14
LSAMP-206ENST00000498645 NRKQ7Z2Y5 1582 aa15.89■□□□□ 0.13
LSAMP-206ENST00000498645 ABTB2Q8N961 1025 aa15.89■□□□□ 0.13
LSAMP-206ENST00000498645 TRPM1Q7Z4N2 1603 aa15.89■□□□□ 0.13
LSAMP-206ENST00000498645 PLEKHG3A1L390 1219 aa15.88■□□□□ 0.13
LSAMP-206ENST00000498645 FAM182BQ5T319 152 aa15.88■□□□□ 0.13
LSAMP-206ENST00000498645 THSD7AQ9UPZ6 1657 aa15.88■□□□□ 0.13
LSAMP-206ENST00000498645 USP35Q9P2H5 1018 aa15.86■□□□□ 0.13
LSAMP-206ENST00000498645 RGPD1P0DJD0 1748 aa15.85■□□□□ 0.13
LSAMP-206ENST00000498645 SPATA31A1Q5TZJ5 1347 aa15.85■□□□□ 0.13
LSAMP-206ENST00000498645 ZBTB7CA1YPR0 619 aa15.84■□□□□ 0.13
LSAMP-206ENST00000498645 EVA1CP58658 441 aa15.84■□□□□ 0.13
LSAMP-206ENST00000498645 ROCK2O75116 1388 aaKnown RBP15.84■□□□□ 0.13
LSAMP-206ENST00000498645 BAG6P46379 1132 aa15.83■□□□□ 0.12
LSAMP-206ENST00000498645 CABP1Q9NZU7 370 aa15.83■□□□□ 0.12
LSAMP-206ENST00000498645 NLRP13Q86W25 1043 aa15.82■□□□□ 0.12
LSAMP-206ENST00000498645 USP19O94966 1318 aa15.82■□□□□ 0.12
LSAMP-206ENST00000498645 EVC2Q86UK5 1308 aa15.82■□□□□ 0.12
LSAMP-206ENST00000498645 SSH2Q76I76 1423 aa15.82■□□□□ 0.12
LSAMP-206ENST00000498645 LMO7Q8WWI1 1683 aa15.82■□□□□ 0.12
LSAMP-206ENST00000498645 CAMTA1Q9Y6Y1 1673 aa15.82■□□□□ 0.12
LSAMP-206ENST00000498645 USP6P35125 1406 aa15.81■□□□□ 0.12
LSAMP-206ENST00000498645 TNS1Q9HBL0 1735 aaKnown RBP15.81■□□□□ 0.12
LSAMP-206ENST00000498645 CPDO75976 1380 aa15.8■□□□□ 0.12
LSAMP-206ENST00000498645 LARP1Q6PKG0 1096 aaKnown RBP15.8■□□□□ 0.12
LSAMP-206ENST00000498645 PIK3C2AO00443 1686 aa15.79■□□□□ 0.12
LSAMP-206ENST00000498645 GCP02774 474 aa15.79■□□□□ 0.12
LSAMP-206ENST00000498645 NLRP6P59044 892 aa15.79■□□□□ 0.12
LSAMP-206ENST00000498645 PSDA5PKW4 1024 aaPredicted RBP15.78■□□□□ 0.12
LSAMP-206ENST00000498645 EN1Q05925 392 aaPredicted RBP15.78■□□□□ 0.12
LSAMP-206ENST00000498645 AKAP12Q02952 1782 aa15.77■□□□□ 0.12
LSAMP-206ENST00000498645 BRD4O60885 1362 aaPredicted RBP15.77■□□□□ 0.12
LSAMP-206ENST00000498645 TRIM37O94972 964 aa15.76■□□□□ 0.11
LSAMP-206ENST00000498645 PDE3BQ13370 1112 aa15.76■□□□□ 0.11
LSAMP-206ENST00000498645 TCP11L2Q8N4U5 519 aa15.76■□□□□ 0.11
LSAMP-206ENST00000498645 SLIT3O75094 1523 aa15.76■□□□□ 0.11
LSAMP-206ENST00000498645 COL5A2P05997 1499 aaPredicted RBP15.76■□□□□ 0.11
LSAMP-206ENST00000498645 SOX12O15370 315 aa15.75■□□□□ 0.11
LSAMP-206ENST00000498645 FAM196AQ6ZSG2 479 aa15.75■□□□□ 0.11
LSAMP-206ENST00000498645 BARGINQ6ZT62 677 aa15.75■□□□□ 0.11
LSAMP-206ENST00000498645 PARP4Q9UKK3 1724 aaKnown RBP15.73■□□□□ 0.11
LSAMP-206ENST00000498645 RGPD5Q99666 1765 aa15.72■□□□□ 0.11
LSAMP-206ENST00000498645 DISP2A7MBM2 1401 aa15.72■□□□□ 0.11
LSAMP-206ENST00000498645 CRB1P82279 1406 aa15.72■□□□□ 0.11
LSAMP-206ENST00000498645 EZH2Q15910 746 aaKnown RBP15.72■□□□□ 0.11
LSAMP-206ENST00000498645 CARD11Q9BXL7 1154 aa15.72■□□□□ 0.11
LSAMP-206ENST00000498645 TONSLQ96HA7 1378 aa15.72■□□□□ 0.11
LSAMP-206ENST00000498645 LRP5O75197 1615 aa15.72■□□□□ 0.11
LSAMP-206ENST00000498645 TTC21BQ7Z4L5 1316 aa15.71■□□□□ 0.11
LSAMP-206ENST00000498645 APBA3O96018 575 aa15.71■□□□□ 0.11
LSAMP-206ENST00000498645 THRAP3Q9Y2W1 955 aaKnown RBP15.71■□□□□ 0.11
LSAMP-206ENST00000498645 COL18A1P39060 1754 aa15.71■□□□□ 0.11
LSAMP-206ENST00000498645 AATKQ6ZMQ8 1374 aa15.71■□□□□ 0.11
LSAMP-206ENST00000498645 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
LSAMP-206ENST00000498645 MON2Q7Z3U7 1717 aa15.71■□□□□ 0.1
LSAMP-206ENST00000498645 WNK3Q9BYP7 1800 aa15.71■□□□□ 0.1
LSAMP-206ENST00000498645 CPSF1Q10570 1443 aaKnown RBP15.7■□□□□ 0.1
LSAMP-206ENST00000498645 R3HDM1Q15032 1099 aaKnown RBP15.7■□□□□ 0.1
LSAMP-206ENST00000498645 TOM1L2Q6ZVM7 507 aa15.7■□□□□ 0.1
LSAMP-206ENST00000498645 ZNF692Q9BU19 519 aaPredicted RBP15.7■□□□□ 0.1
LSAMP-206ENST00000498645 LRRC37A3O60309 1634 aa15.69■□□□□ 0.1
LSAMP-206ENST00000498645 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
LSAMP-206ENST00000498645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.68■□□□□ 0.1
LSAMP-206ENST00000498645 RREB1Q92766 1687 aa15.67■□□□□ 0.1
LSAMP-206ENST00000498645 CSB-PGBD3P0DP91 1061 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms