RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 CCDC125Q86Z20 511 aa24.27■■□□□ 1.48
CDKN2A-209ENST00000498628 POLR3AO14802 1390 aaPredicted RBP24.27■■□□□ 1.48
CDKN2A-209ENST00000498628 ALS2Q96Q42 1657 aa24.26■■□□□ 1.47
CDKN2A-209ENST00000498628 ROCK2O75116 1388 aaKnown RBP24.26■■□□□ 1.47
CDKN2A-209ENST00000498628 NWD2Q9ULI1 1742 aa24.25■■□□□ 1.47
CDKN2A-209ENST00000498628 BTG4Q9NY30 223 aa24.25■■□□□ 1.47
CDKN2A-209ENST00000498628 ABCA3Q99758 1704 aa24.24■■□□□ 1.47
CDKN2A-209ENST00000498628 TRIM26Q12899 539 aaPredicted RBP24.24■■□□□ 1.47
CDKN2A-209ENST00000498628 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
CDKN2A-209ENST00000498628 PRDM11Q9NQV5 511 aa24.24■■□□□ 1.47
CDKN2A-209ENST00000498628 EVC2Q86UK5 1308 aa24.24■■□□□ 1.47
CDKN2A-209ENST00000498628 ABTB2Q8N961 1025 aa24.22■■□□□ 1.47
CDKN2A-209ENST00000498628 PLCH1Q4KWH8 1693 aa24.21■■□□□ 1.47
CDKN2A-209ENST00000498628 PPIP5K1Q6PFW1 1433 aa24.21■■□□□ 1.47
CDKN2A-209ENST00000498628 SEPT12Q8IYM1 358 aa24.21■■□□□ 1.47
CDKN2A-209ENST00000498628 BRD4O60885 1362 aaPredicted RBP24.2■■□□□ 1.46
CDKN2A-209ENST00000498628 ONECUT3O60422 494 aaPredicted RBP24.2■■□□□ 1.46
CDKN2A-209ENST00000498628 GLI3P10071 1580 aa24.2■■□□□ 1.46
CDKN2A-209ENST00000498628 COL14A1Q05707 1796 aaKnown RBP24.19■■□□□ 1.46
CDKN2A-209ENST00000498628 TOPAZ1Q8N9V7 1692 aa24.19■■□□□ 1.46
CDKN2A-209ENST00000498628 A0A0G2JS52 829 aa24.19■■□□□ 1.46
CDKN2A-209ENST00000498628 MYT1Q01538 1121 aa24.19■■□□□ 1.46
CDKN2A-209ENST00000498628 NUTM2GQ5VZR2 741 aa24.19■■□□□ 1.46
CDKN2A-209ENST00000498628 TRPM1Q7Z4N2 1603 aa24.19■■□□□ 1.46
CDKN2A-209ENST00000498628 TONSLQ96HA7 1378 aa24.18■■□□□ 1.46
CDKN2A-209ENST00000498628 NLRP13Q86W25 1043 aa24.18■■□□□ 1.46
CDKN2A-209ENST00000498628 QRICH2Q9H0J4 1663 aa24.18■■□□□ 1.46
CDKN2A-209ENST00000498628 CABP1Q9NZU7 370 aa24.17■■□□□ 1.46
CDKN2A-209ENST00000498628 SF3B2Q13435 895 aaKnown RBP24.15■■□□□ 1.46
CDKN2A-209ENST00000498628 KIAA0232Q92628 1395 aa24.15■■□□□ 1.46
CDKN2A-209ENST00000498628 ZC3H6P61129 1189 aaKnown RBP24.14■■□□□ 1.45
CDKN2A-209ENST00000498628 KRT27Q7Z3Y8 459 aa24.14■■□□□ 1.45
CDKN2A-209ENST00000498628 EVA1CP58658 441 aa24.13■■□□□ 1.45
CDKN2A-209ENST00000498628 FAM98CQ17RN3 349 aaKnown RBP24.13■■□□□ 1.45
CDKN2A-209ENST00000498628 ZNF692Q9BU19 519 aaPredicted RBP24.13■■□□□ 1.45
CDKN2A-209ENST00000498628 CARD11Q9BXL7 1154 aa24.13■■□□□ 1.45
CDKN2A-209ENST00000498628 SPATA31A5Q5VU36 1347 aa24.11■■□□□ 1.45
CDKN2A-209ENST00000498628 SPATA31A7Q8IWB4 1347 aa24.11■■□□□ 1.45
CDKN2A-209ENST00000498628 CHRNA2Q15822 529 aa24.11■■□□□ 1.45
CDKN2A-209ENST00000498628 CRYBG1Q9Y4K1 1723 aa24.1■■□□□ 1.45
CDKN2A-209ENST00000498628 NRAPQ86VF7 1730 aa24.1■■□□□ 1.45
CDKN2A-209ENST00000498628 STRN4Q9NRL3 753 aa24.09■■□□□ 1.45
CDKN2A-209ENST00000498628 BLMP54132 1417 aaPredicted RBP24.09■■□□□ 1.45
CDKN2A-209ENST00000498628 GCP02774 474 aa24.08■■□□□ 1.45
CDKN2A-209ENST00000498628 NLRP6P59044 892 aa24.08■■□□□ 1.45
CDKN2A-209ENST00000498628 USP19O94966 1318 aa24.08■■□□□ 1.44
CDKN2A-209ENST00000498628 PHRF1Q9P1Y6 1649 aaKnown RBP24.07■■□□□ 1.44
CDKN2A-209ENST00000498628 ZRANB1Q9UGI0 708 aa24.07■■□□□ 1.44
CDKN2A-209ENST00000498628 USP6P35125 1406 aa24.07■■□□□ 1.44
CDKN2A-209ENST00000498628 CPDO75976 1380 aa24.06■■□□□ 1.44
CDKN2A-209ENST00000498628 SPATA31A1Q5TZJ5 1347 aa24.05■■□□□ 1.44
CDKN2A-209ENST00000498628 BRWD3Q6RI45 1802 aa24.04■■□□□ 1.44
CDKN2A-209ENST00000498628 SBNO2Q9Y2G9 1366 aa24.03■■□□□ 1.44
CDKN2A-209ENST00000498628 SLC24A1O60721 1099 aa24.01■■□□□ 1.43
CDKN2A-209ENST00000498628 TTC21AQ8NDW8 1320 aa24.01■■□□□ 1.43
CDKN2A-209ENST00000498628 NRKQ7Z2Y5 1582 aa24■■□□□ 1.43
CDKN2A-209ENST00000498628 ZBTB7CA1YPR0 619 aa24■■□□□ 1.43
CDKN2A-209ENST00000498628 USP35Q9P2H5 1018 aa24■■□□□ 1.43
CDKN2A-209ENST00000498628 TTC21BQ7Z4L5 1316 aa24■■□□□ 1.43
CDKN2A-209ENST00000498628 KCNH5Q8NCM2 988 aa23.99■■□□□ 1.43
CDKN2A-209ENST00000498628 SSH2Q76I76 1423 aa23.99■■□□□ 1.43
CDKN2A-209ENST00000498628 BAG6P46379 1132 aa23.98■■□□□ 1.43
CDKN2A-209ENST00000498628 BARGINQ6ZT62 677 aa23.98■■□□□ 1.43
CDKN2A-209ENST00000498628 THRAP3Q9Y2W1 955 aaKnown RBP23.98■■□□□ 1.43
CDKN2A-209ENST00000498628 KTN1Q86UP2 1357 aaKnown RBP23.98■■□□□ 1.43
CDKN2A-209ENST00000498628 TCP11L2Q8N4U5 519 aa23.97■■□□□ 1.43
CDKN2A-209ENST00000498628 LARP1Q6PKG0 1096 aaKnown RBP23.96■■□□□ 1.43
CDKN2A-209ENST00000498628 HDGFL2Q7Z4V5 671 aaPredicted RBP23.96■■□□□ 1.43
CDKN2A-209ENST00000498628 TMC1Q8TDI8 760 aa23.96■■□□□ 1.43
CDKN2A-209ENST00000498628 PUS7Q96PZ0 661 aaKnown RBP23.96■■□□□ 1.43
CDKN2A-209ENST00000498628 PDE3BQ13370 1112 aa23.95■■□□□ 1.42
CDKN2A-209ENST00000498628 DEFB132Q7Z7B7 95 aa23.95■■□□□ 1.42
CDKN2A-209ENST00000498628 CAMTA1Q9Y6Y1 1673 aa23.95■■□□□ 1.42
CDKN2A-209ENST00000498628 AATKQ6ZMQ8 1374 aa23.94■■□□□ 1.42
CDKN2A-209ENST00000498628 FAM196AQ6ZSG2 479 aa23.94■■□□□ 1.42
CDKN2A-209ENST00000498628 CPSF1Q10570 1443 aaKnown RBP23.93■■□□□ 1.42
CDKN2A-209ENST00000498628 SLIT3O75094 1523 aa23.93■■□□□ 1.42
CDKN2A-209ENST00000498628 EP400Q96L91 3159 aa23.92■■□□□ 1.42
CDKN2A-209ENST00000498628 TERF2IPQ9NYB0 399 aa23.92■■□□□ 1.42
CDKN2A-209ENST00000498628 THSD7AQ9UPZ6 1657 aa23.92■■□□□ 1.42
CDKN2A-209ENST00000498628 LMO7Q8WWI1 1683 aa23.9■■□□□ 1.42
CDKN2A-209ENST00000498628 AKAP12Q02952 1782 aa23.9■■□□□ 1.42
CDKN2A-209ENST00000498628 COL5A2P05997 1499 aaPredicted RBP23.89■■□□□ 1.42
CDKN2A-209ENST00000498628 FAM182BQ5T319 152 aa23.89■■□□□ 1.41
CDKN2A-209ENST00000498628 TOM1L2Q6ZVM7 507 aa23.89■■□□□ 1.41
CDKN2A-209ENST00000498628 PIK3C2AO00443 1686 aa23.89■■□□□ 1.41
CDKN2A-209ENST00000498628 CRB1P82279 1406 aa23.88■■□□□ 1.41
CDKN2A-209ENST00000498628 C11orf95C9JLR9 678 aaPredicted RBP23.88■■□□□ 1.41
CDKN2A-209ENST00000498628 SOX12O15370 315 aa23.88■■□□□ 1.41
CDKN2A-209ENST00000498628 ARHGEF25Q86VW2 580 aa23.88■■□□□ 1.41
CDKN2A-209ENST00000498628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.88■■□□□ 1.41
CDKN2A-209ENST00000498628 ST20-MTHFSA0A0A6YYL1 179 aa23.87■■□□□ 1.41
CDKN2A-209ENST00000498628 SLC12A5Q9H2X9 1139 aa23.87■■□□□ 1.41
CDKN2A-209ENST00000498628 TIMELESSQ9UNS1 1208 aa23.86■■□□□ 1.41
CDKN2A-209ENST00000498628 CSB-PGBD3P0DP91 1061 aa23.85■■□□□ 1.41
CDKN2A-209ENST00000498628 USP31Q70CQ4 1352 aa23.84■■□□□ 1.41
CDKN2A-209ENST00000498628 NINLQ9Y2I6 1382 aa23.84■■□□□ 1.41
CDKN2A-209ENST00000498628 WDR17Q8IZU2 1322 aa23.84■■□□□ 1.41
CDKN2A-209ENST00000498628 CDCA7Q9BWT1 371 aaPredicted RBP23.83■■□□□ 1.41
CDKN2A-209ENST00000498628 RGPD1P0DJD0 1748 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms