RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 SRCAPQ6ZRS2 3230 aa17.52■□□□□ 0.4
CNOT4-211ENST00000498534 A0A0G2JS52 829 aa17.52■□□□□ 0.4
CNOT4-211ENST00000498534 MYT1Q01538 1121 aa17.52■□□□□ 0.4
CNOT4-211ENST00000498534 KRT27Q7Z3Y8 459 aa17.52■□□□□ 0.4
CNOT4-211ENST00000498534 BTG4Q9NY30 223 aa17.52■□□□□ 0.4
CNOT4-211ENST00000498534 BLMP54132 1417 aaPredicted RBP17.52■□□□□ 0.4
CNOT4-211ENST00000498534 ADGRB2O60241 1585 aa17.52■□□□□ 0.39
CNOT4-211ENST00000498534 PRR36Q9H6K5 1346 aa17.51■□□□□ 0.39
CNOT4-211ENST00000498534 NWD2Q9ULI1 1742 aa17.5■□□□□ 0.39
CNOT4-211ENST00000498534 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
CNOT4-211ENST00000498534 TULP4Q9NRJ4 1543 aa17.48■□□□□ 0.39
CNOT4-211ENST00000498534 FAM98CQ17RN3 349 aaKnown RBP17.48■□□□□ 0.39
CNOT4-211ENST00000498534 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
CNOT4-211ENST00000498534 BRWD3Q6RI45 1802 aa17.47■□□□□ 0.39
CNOT4-211ENST00000498534 DEFB132Q7Z7B7 95 aa17.47■□□□□ 0.39
CNOT4-211ENST00000498534 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
CNOT4-211ENST00000498534 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
CNOT4-211ENST00000498534 ABCA3Q99758 1704 aa17.45■□□□□ 0.38
CNOT4-211ENST00000498534 TRPM3Q9HCF6 1732 aaPredicted RBP17.44■□□□□ 0.38
CNOT4-211ENST00000498534 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
CNOT4-211ENST00000498534 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
CNOT4-211ENST00000498534 ALS2Q96Q42 1657 aa17.43■□□□□ 0.38
CNOT4-211ENST00000498534 BAG6P46379 1132 aa17.43■□□□□ 0.38
CNOT4-211ENST00000498534 SPATA31A5Q5VU36 1347 aa17.43■□□□□ 0.38
CNOT4-211ENST00000498534 SPATA31A7Q8IWB4 1347 aa17.43■□□□□ 0.38
CNOT4-211ENST00000498534 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
CNOT4-211ENST00000498534 NBPF8Q3BBV2 869 aa17.42■□□□□ 0.38
CNOT4-211ENST00000498534 ACEP12821 1306 aa17.41■□□□□ 0.38
CNOT4-211ENST00000498534 EVA1CP58658 441 aa17.4■□□□□ 0.38
CNOT4-211ENST00000498534 ZC3H6P61129 1189 aaKnown RBP17.4■□□□□ 0.38
CNOT4-211ENST00000498534 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
CNOT4-211ENST00000498534 ITSN1Q15811 1721 aa17.39■□□□□ 0.37
CNOT4-211ENST00000498534 ARHGEF28Q8N1W1 1705 aaKnown RBP17.39■□□□□ 0.37
CNOT4-211ENST00000498534 PLEKHG3A1L390 1219 aa17.39■□□□□ 0.37
CNOT4-211ENST00000498534 CHRNA2Q15822 529 aa17.39■□□□□ 0.37
CNOT4-211ENST00000498534 ABTB2Q8N961 1025 aa17.39■□□□□ 0.37
CNOT4-211ENST00000498534 STRN4Q9NRL3 753 aa17.39■□□□□ 0.37
CNOT4-211ENST00000498534 KIAA0232Q92628 1395 aa17.39■□□□□ 0.37
CNOT4-211ENST00000498534 ATP7BP35670 1465 aa17.38■□□□□ 0.37
CNOT4-211ENST00000498534 NBPF1Q3BBV0 1214 aa17.38■□□□□ 0.37
CNOT4-211ENST00000498534 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
CNOT4-211ENST00000498534 NRAPQ86VF7 1730 aa17.38■□□□□ 0.37
CNOT4-211ENST00000498534 SRPK2P78362 688 aaKnown RBP17.37■□□□□ 0.37
CNOT4-211ENST00000498534 POLR3AO14802 1390 aaPredicted RBP17.37■□□□□ 0.37
CNOT4-211ENST00000498534 FAM182BQ5T319 152 aa17.36■□□□□ 0.37
CNOT4-211ENST00000498534 SPATA31A1Q5TZJ5 1347 aa17.36■□□□□ 0.37
CNOT4-211ENST00000498534 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
CNOT4-211ENST00000498534 KIAA1210Q9ULL0 1709 aa17.35■□□□□ 0.37
CNOT4-211ENST00000498534 EN1Q05925 392 aaPredicted RBP17.34■□□□□ 0.37
CNOT4-211ENST00000498534 CENPJQ9HC77 1338 aaPredicted RBP17.34■□□□□ 0.37
CNOT4-211ENST00000498534 USP35Q9P2H5 1018 aa17.34■□□□□ 0.37
CNOT4-211ENST00000498534 FAM196AQ6ZSG2 479 aa17.33■□□□□ 0.36
CNOT4-211ENST00000498534 PDE3BQ13370 1112 aa17.32■□□□□ 0.36
CNOT4-211ENST00000498534 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
CNOT4-211ENST00000498534 CRYBG1Q9Y4K1 1723 aa17.32■□□□□ 0.36
CNOT4-211ENST00000498534 PSDA5PKW4 1024 aaPredicted RBP17.31■□□□□ 0.36
CNOT4-211ENST00000498534 GCP02774 474 aa17.3■□□□□ 0.36
CNOT4-211ENST00000498534 BARGINQ6ZT62 677 aa17.3■□□□□ 0.36
CNOT4-211ENST00000498534 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
CNOT4-211ENST00000498534 BRD4O60885 1362 aaPredicted RBP17.29■□□□□ 0.36
CNOT4-211ENST00000498534 TRIM37O94972 964 aa17.29■□□□□ 0.36
CNOT4-211ENST00000498534 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
CNOT4-211ENST00000498534 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
CNOT4-211ENST00000498534 LARP1Q6PKG0 1096 aaKnown RBP17.28■□□□□ 0.36
CNOT4-211ENST00000498534 TCP11L2Q8N4U5 519 aa17.28■□□□□ 0.36
CNOT4-211ENST00000498534 PHRF1Q9P1Y6 1649 aaKnown RBP17.28■□□□□ 0.36
CNOT4-211ENST00000498534 CPDO75976 1380 aa17.28■□□□□ 0.36
CNOT4-211ENST00000498534 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.36
CNOT4-211ENST00000498534 USP19O94966 1318 aa17.27■□□□□ 0.36
CNOT4-211ENST00000498534 TOPAZ1Q8N9V7 1692 aa17.27■□□□□ 0.36
CNOT4-211ENST00000498534 THSD7AQ9UPZ6 1657 aa17.27■□□□□ 0.36
CNOT4-211ENST00000498534 APBA3O96018 575 aa17.27■□□□□ 0.36
CNOT4-211ENST00000498534 NLRP6P59044 892 aa17.27■□□□□ 0.36
CNOT4-211ENST00000498534 THRAP3Q9Y2W1 955 aaKnown RBP17.27■□□□□ 0.36
CNOT4-211ENST00000498534 SSH2Q76I76 1423 aa17.27■□□□□ 0.35
CNOT4-211ENST00000498534 EZH2Q15910 746 aaKnown RBP17.26■□□□□ 0.35
CNOT4-211ENST00000498534 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
CNOT4-211ENST00000498534 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
CNOT4-211ENST00000498534 R3HDM1Q15032 1099 aaKnown RBP17.25■□□□□ 0.35
CNOT4-211ENST00000498534 CAMTA1Q9Y6Y1 1673 aa17.25■□□□□ 0.35
CNOT4-211ENST00000498534 DISP2A7MBM2 1401 aa17.24■□□□□ 0.35
CNOT4-211ENST00000498534 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
CNOT4-211ENST00000498534 CAMKK2Q96RR4 588 aa17.24■□□□□ 0.35
CNOT4-211ENST00000498534 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
CNOT4-211ENST00000498534 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
CNOT4-211ENST00000498534 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
CNOT4-211ENST00000498534 NRKQ7Z2Y5 1582 aa17.21■□□□□ 0.35
CNOT4-211ENST00000498534 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.35
CNOT4-211ENST00000498534 USP6P35125 1406 aa17.21■□□□□ 0.34
CNOT4-211ENST00000498534 NBPF14Q5TI25 921 aa17.2■□□□□ 0.34
CNOT4-211ENST00000498534 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
CNOT4-211ENST00000498534 AATKQ6ZMQ8 1374 aa17.19■□□□□ 0.34
CNOT4-211ENST00000498534 LRP5O75197 1615 aa17.19■□□□□ 0.34
CNOT4-211ENST00000498534 ROCK2O75116 1388 aaKnown RBP17.18■□□□□ 0.34
CNOT4-211ENST00000498534 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
CNOT4-211ENST00000498534 KCNH5Q8NCM2 988 aa17.18■□□□□ 0.34
CNOT4-211ENST00000498534 CRB1P82279 1406 aa17.18■□□□□ 0.34
CNOT4-211ENST00000498534 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
CNOT4-211ENST00000498534 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
CNOT4-211ENST00000498534 LMO7Q8WWI1 1683 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms