RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 BRWD3Q6RI45 1802 aa25.13■■□□□ 1.61
HDAC11-220ENST00000498532 NBPF1Q3BBV0 1214 aa25.12■■□□□ 1.61
HDAC11-220ENST00000498532 CCDC125Q86Z20 511 aa25.1■■□□□ 1.61
HDAC11-220ENST00000498532 SEPT12Q8IYM1 358 aa25.09■■□□□ 1.61
HDAC11-220ENST00000498532 BTG4Q9NY30 223 aa25.08■■□□□ 1.61
HDAC11-220ENST00000498532 POLR3AO14802 1390 aaPredicted RBP25.07■■□□□ 1.6
HDAC11-220ENST00000498532 PHRF1Q9P1Y6 1649 aaKnown RBP25.07■■□□□ 1.6
HDAC11-220ENST00000498532 QRICH2Q9H0J4 1663 aa25.07■■□□□ 1.6
HDAC11-220ENST00000498532 CCDC61Q9Y6R9 512 aa25.06■■□□□ 1.6
HDAC11-220ENST00000498532 CENPJQ9HC77 1338 aaPredicted RBP25.06■■□□□ 1.6
HDAC11-220ENST00000498532 ACEP12821 1306 aa25.05■■□□□ 1.6
HDAC11-220ENST00000498532 BLMP54132 1417 aaPredicted RBP25.04■■□□□ 1.6
HDAC11-220ENST00000498532 PRDM11Q9NQV5 511 aa25.04■■□□□ 1.6
HDAC11-220ENST00000498532 A0A0G2JS52 829 aa25.03■■□□□ 1.6
HDAC11-220ENST00000498532 ONECUT3O60422 494 aaPredicted RBP25.03■■□□□ 1.6
HDAC11-220ENST00000498532 SRPK2P78362 688 aaKnown RBP25.03■■□□□ 1.6
HDAC11-220ENST00000498532 MYT1Q01538 1121 aa25.03■■□□□ 1.6
HDAC11-220ENST00000498532 L3MBTL2Q969R5 705 aa25.03■■□□□ 1.6
HDAC11-220ENST00000498532 TRPM1Q7Z4N2 1603 aa25.01■■□□□ 1.59
HDAC11-220ENST00000498532 PLEKHG3A1L390 1219 aa25.01■■□□□ 1.59
HDAC11-220ENST00000498532 NBPF8Q3BBV2 869 aa25.01■■□□□ 1.59
HDAC11-220ENST00000498532 SRCAPQ6ZRS2 3230 aa25.01■■□□□ 1.59
HDAC11-220ENST00000498532 PPIP5K1Q6PFW1 1433 aa25.01■■□□□ 1.59
HDAC11-220ENST00000498532 FAM98CQ17RN3 349 aaKnown RBP25■■□□□ 1.59
HDAC11-220ENST00000498532 KRT27Q7Z3Y8 459 aa25■■□□□ 1.59
HDAC11-220ENST00000498532 KIAA0232Q92628 1395 aa25■■□□□ 1.59
HDAC11-220ENST00000498532 NUTM2GQ5VZR2 741 aa24.99■■□□□ 1.59
HDAC11-220ENST00000498532 SIN3AQ96ST3 1273 aa24.98■■□□□ 1.59
HDAC11-220ENST00000498532 ZRANB1Q9UGI0 708 aa24.98■■□□□ 1.59
HDAC11-220ENST00000498532 NRKQ7Z2Y5 1582 aa24.97■■□□□ 1.59
HDAC11-220ENST00000498532 SPATA31A5Q5VU36 1347 aa24.97■■□□□ 1.59
HDAC11-220ENST00000498532 SPATA31A7Q8IWB4 1347 aa24.97■■□□□ 1.59
HDAC11-220ENST00000498532 SF3B2Q13435 895 aaKnown RBP24.96■■□□□ 1.59
HDAC11-220ENST00000498532 NEUROD1Q13562 356 aa24.96■■□□□ 1.59
HDAC11-220ENST00000498532 CABP2Q9NPB3 220 aa24.96■■□□□ 1.59
HDAC11-220ENST00000498532 ABTB2Q8N961 1025 aa24.95■■□□□ 1.58
HDAC11-220ENST00000498532 CHRNA2Q15822 529 aa24.94■■□□□ 1.58
HDAC11-220ENST00000498532 THSD7AQ9UPZ6 1657 aa24.94■■□□□ 1.58
HDAC11-220ENST00000498532 ROCK2O75116 1388 aaKnown RBP24.93■■□□□ 1.58
HDAC11-220ENST00000498532 ZC3H6P61129 1189 aaKnown RBP24.93■■□□□ 1.58
HDAC11-220ENST00000498532 STRN4Q9NRL3 753 aa24.91■■□□□ 1.58
HDAC11-220ENST00000498532 BRD4O60885 1362 aaPredicted RBP24.91■■□□□ 1.58
HDAC11-220ENST00000498532 USP19O94966 1318 aa24.9■■□□□ 1.58
HDAC11-220ENST00000498532 DEFB132Q7Z7B7 95 aa24.9■■□□□ 1.58
HDAC11-220ENST00000498532 EVC2Q86UK5 1308 aa24.89■■□□□ 1.58
HDAC11-220ENST00000498532 SPATA31A1Q5TZJ5 1347 aa24.88■■□□□ 1.57
HDAC11-220ENST00000498532 USP6P35125 1406 aa24.88■■□□□ 1.57
HDAC11-220ENST00000498532 NLRP13Q86W25 1043 aa24.88■■□□□ 1.57
HDAC11-220ENST00000498532 CABP1Q9NZU7 370 aa24.88■■□□□ 1.57
HDAC11-220ENST00000498532 CPDO75976 1380 aa24.88■■□□□ 1.57
HDAC11-220ENST00000498532 LMO7Q8WWI1 1683 aa24.87■■□□□ 1.57
HDAC11-220ENST00000498532 SSH2Q76I76 1423 aa24.86■■□□□ 1.57
HDAC11-220ENST00000498532 RGPD1P0DJD0 1748 aa24.86■■□□□ 1.57
HDAC11-220ENST00000498532 CAMTA1Q9Y6Y1 1673 aa24.85■■□□□ 1.57
HDAC11-220ENST00000498532 EVA1CP58658 441 aa24.84■■□□□ 1.57
HDAC11-220ENST00000498532 GCP02774 474 aa24.83■■□□□ 1.57
HDAC11-220ENST00000498532 BAG6P46379 1132 aa24.82■■□□□ 1.56
HDAC11-220ENST00000498532 FAM182BQ5T319 152 aa24.82■■□□□ 1.56
HDAC11-220ENST00000498532 USP35Q9P2H5 1018 aa24.82■■□□□ 1.56
HDAC11-220ENST00000498532 PIK3C2AO00443 1686 aa24.81■■□□□ 1.56
HDAC11-220ENST00000498532 SLIT3O75094 1523 aa24.81■■□□□ 1.56
HDAC11-220ENST00000498532 NLRP6P59044 892 aa24.8■■□□□ 1.56
HDAC11-220ENST00000498532 TNS1Q9HBL0 1735 aaKnown RBP24.79■■□□□ 1.56
HDAC11-220ENST00000498532 AKAP12Q02952 1782 aa24.79■■□□□ 1.56
HDAC11-220ENST00000498532 COL5A2P05997 1499 aaPredicted RBP24.78■■□□□ 1.56
HDAC11-220ENST00000498532 LARP1Q6PKG0 1096 aaKnown RBP24.78■■□□□ 1.56
HDAC11-220ENST00000498532 BARGINQ6ZT62 677 aa24.77■■□□□ 1.56
HDAC11-220ENST00000498532 ZBTB7CA1YPR0 619 aa24.76■■□□□ 1.55
HDAC11-220ENST00000498532 TONSLQ96HA7 1378 aa24.76■■□□□ 1.55
HDAC11-220ENST00000498532 TCP11L2Q8N4U5 519 aa24.75■■□□□ 1.55
HDAC11-220ENST00000498532 SBNO2Q9Y2G9 1366 aa24.75■■□□□ 1.55
HDAC11-220ENST00000498532 ZNF692Q9BU19 519 aaPredicted RBP24.74■■□□□ 1.55
HDAC11-220ENST00000498532 CARD11Q9BXL7 1154 aa24.74■■□□□ 1.55
HDAC11-220ENST00000498532 DISP2A7MBM2 1401 aa24.74■■□□□ 1.55
HDAC11-220ENST00000498532 AATKQ6ZMQ8 1374 aa24.73■■□□□ 1.55
HDAC11-220ENST00000498532 FAM196AQ6ZSG2 479 aa24.73■■□□□ 1.55
HDAC11-220ENST00000498532 CRB1P82279 1406 aa24.72■■□□□ 1.55
HDAC11-220ENST00000498532 EN1Q05925 392 aaPredicted RBP24.72■■□□□ 1.55
HDAC11-220ENST00000498532 PDE3BQ13370 1112 aa24.72■■□□□ 1.55
HDAC11-220ENST00000498532 THRAP3Q9Y2W1 955 aaKnown RBP24.72■■□□□ 1.55
HDAC11-220ENST00000498532 PARP4Q9UKK3 1724 aaKnown RBP24.72■■□□□ 1.55
HDAC11-220ENST00000498532 CPSF1Q10570 1443 aaKnown RBP24.71■■□□□ 1.55
HDAC11-220ENST00000498532 TTC21BQ7Z4L5 1316 aa24.71■■□□□ 1.55
HDAC11-220ENST00000498532 MON2Q7Z3U7 1717 aa24.71■■□□□ 1.55
HDAC11-220ENST00000498532 KTN1Q86UP2 1357 aaKnown RBP24.7■■□□□ 1.55
HDAC11-220ENST00000498532 TTC21AQ8NDW8 1320 aa24.7■■□□□ 1.54
HDAC11-220ENST00000498532 COL18A1P39060 1754 aa24.69■■□□□ 1.54
HDAC11-220ENST00000498532 TRIM37O94972 964 aa24.68■■□□□ 1.54
HDAC11-220ENST00000498532 KCNH5Q8NCM2 988 aa24.67■■□□□ 1.54
HDAC11-220ENST00000498532 LRP5O75197 1615 aa24.66■■□□□ 1.54
HDAC11-220ENST00000498532 PSDA5PKW4 1024 aaPredicted RBP24.65■■□□□ 1.54
HDAC11-220ENST00000498532 SOX12O15370 315 aa24.65■■□□□ 1.54
HDAC11-220ENST00000498532 LRRC37A3O60309 1634 aa24.64■■□□□ 1.54
HDAC11-220ENST00000498532 WNK3Q9BYP7 1800 aa24.64■■□□□ 1.54
HDAC11-220ENST00000498532 TOM1L2Q6ZVM7 507 aa24.64■■□□□ 1.54
HDAC11-220ENST00000498532 NFAT5O94916 1531 aa24.64■■□□□ 1.53
HDAC11-220ENST00000498532 WDR17Q8IZU2 1322 aa24.62■■□□□ 1.53
HDAC11-220ENST00000498532 APBA3O96018 575 aa24.62■■□□□ 1.53
HDAC11-220ENST00000498532 EZH2Q15910 746 aaKnown RBP24.62■■□□□ 1.53
HDAC11-220ENST00000498532 ARHGEF25Q86VW2 580 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms