RNA–Protein interactions for RNA: ENST00000498300.5

CCSER2-209, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 3

Gene CCSER2, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-209ENST00000498300 ZNF772Q68DY9 489 aaPredicted RBP11.5□□□□□ -0.57
CCSER2-209ENST00000498300 BRINP3Q76B58 766 aa11.5□□□□□ -0.57
CCSER2-209ENST00000498300 UPF1Q92900 1129 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCSER2-209ENST00000498300 TRIM52Q96A61 297 aa11.5□□□□□ -0.57
CCSER2-209ENST00000498300 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
CCSER2-209ENST00000498300 AMOTL2Q9Y2J4 779 aa11.5□□□□□ -0.57
CCSER2-209ENST00000498300 TRPM2O94759 1503 aa11.49□□□□□ -0.57
CCSER2-209ENST00000498300 IQGAP3Q86VI3 1631 aa11.49□□□□□ -0.57
CCSER2-209ENST00000498300 NUTM2BA6NNL0 878 aaPredicted RBP11.48□□□□□ -0.57
CCSER2-209ENST00000498300 NUTM2EB1AL46 878 aaPredicted RBP11.48□□□□□ -0.57
CCSER2-209ENST00000498300 NUTM2AQ8IVF1 878 aaPredicted RBP11.48□□□□□ -0.57
CCSER2-209ENST00000498300 NUP155O75694 1391 aa11.47□□□□□ -0.57
CCSER2-209ENST00000498300 ROCK1Q13464 1354 aa11.47□□□□□ -0.57
CCSER2-209ENST00000498300 RIMBP2O15034 1052 aa11.47□□□□□ -0.57
CCSER2-209ENST00000498300 RXRBP28702 533 aa11.47□□□□□ -0.57
CCSER2-209ENST00000498300 ZNF687Q8N1G0 1237 aa11.47□□□□□ -0.57
CCSER2-209ENST00000498300 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
CCSER2-209ENST00000498300 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.57
CCSER2-209ENST00000498300 ASXL1Q8IXJ9 1541 aa11.46□□□□□ -0.57
CCSER2-209ENST00000498300 DCCP43146 1447 aa11.46□□□□□ -0.57
CCSER2-209ENST00000498300 XRN1Q8IZH2 1706 aaKnown RBP11.46□□□□□ -0.58
CCSER2-209ENST00000498300 MST1RQ04912 1400 aa11.45□□□□□ -0.58
CCSER2-209ENST00000498300 SETD5Q9C0A6 1442 aa11.44□□□□□ -0.58
CCSER2-209ENST00000498300 METP08581 1390 aa11.44□□□□□ -0.58
CCSER2-209ENST00000498300 AFF2P51816 1311 aa11.44□□□□□ -0.58
CCSER2-209ENST00000498300 SETBP1Q9Y6X0 1596 aa11.44□□□□□ -0.58
CCSER2-209ENST00000498300 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
CCSER2-209ENST00000498300 DDX17Q92841 729 aaKnown RBP11.43□□□□□ -0.58
CCSER2-209ENST00000498300 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
CCSER2-209ENST00000498300 ITGAEP38570 1179 aa11.42□□□□□ -0.58
CCSER2-209ENST00000498300 LRRC59Q96AG4 307 aaKnown RBP11.42□□□□□ -0.58
CCSER2-209ENST00000498300 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
CCSER2-209ENST00000498300 PTGER2P43116 358 aa11.41□□□□□ -0.58
CCSER2-209ENST00000498300 ZNF326Q5BKZ1 582 aaKnown RBP11.41□□□□□ -0.58
CCSER2-209ENST00000498300 C8orf37Q96NL8 207 aa11.41□□□□□ -0.58
CCSER2-209ENST00000498300 PNPLA6Q8IY17 1366 aa11.41□□□□□ -0.58
CCSER2-209ENST00000498300 SPHKAPQ2M3C7 1700 aa11.4□□□□□ -0.58
CCSER2-209ENST00000498300 ADGRL3Q9HAR2 1447 aa11.4□□□□□ -0.58
CCSER2-209ENST00000498300 RGS12O14924 1447 aa11.39□□□□□ -0.59
CCSER2-209ENST00000498300 NALCNQ8IZF0 1738 aa11.39□□□□□ -0.59
CCSER2-209ENST00000498300 QTRT2Q9H974 415 aaKnown RBP11.39□□□□□ -0.59
CCSER2-209ENST00000498300 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
CCSER2-209ENST00000498300 GPR153Q6NV75 609 aa11.38□□□□□ -0.59
CCSER2-209ENST00000498300 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
CCSER2-209ENST00000498300 NEXMIFQ5QGS0 1516 aa11.38□□□□□ -0.59
CCSER2-209ENST00000498300 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
CCSER2-209ENST00000498300 CLTCL1P53675 1640 aa11.37□□□□□ -0.59
CCSER2-209ENST00000498300 C1orf167Q5SNV9 1468 aa11.37□□□□□ -0.59
CCSER2-209ENST00000498300 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
CCSER2-209ENST00000498300 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
CCSER2-209ENST00000498300 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
CCSER2-209ENST00000498300 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
CCSER2-209ENST00000498300 NGLY1Q96IV0 654 aa11.35□□□□□ -0.59
CCSER2-209ENST00000498300 ORAI2Q96SN7 254 aa11.35□□□□□ -0.59
CCSER2-209ENST00000498300 LAMC1P11047 1609 aa11.35□□□□□ -0.59
CCSER2-209ENST00000498300 ROBO2Q9HCK4 1378 aa11.34□□□□□ -0.59
CCSER2-209ENST00000498300 SOS2Q07890 1332 aaPredicted RBP11.34□□□□□ -0.59
CCSER2-209ENST00000498300 PTCH1Q13635 1447 aa11.33□□□□□ -0.6
CCSER2-209ENST00000498300 KIF1BO60333 1816 aa11.32□□□□□ -0.6
CCSER2-209ENST00000498300 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
CCSER2-209ENST00000498300 USP21Q9UK80 565 aa11.31□□□□□ -0.6
CCSER2-209ENST00000498300 PRAG1Q86YV5 1406 aa11.3□□□□□ -0.6
CCSER2-209ENST00000498300 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
CCSER2-209ENST00000498300 FNBP4Q8N3X1 1017 aaPredicted RBP11.3□□□□□ -0.6
CCSER2-209ENST00000498300 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
CCSER2-209ENST00000498300 ATAD2Q6PL18 1390 aa11.29□□□□□ -0.6
CCSER2-209ENST00000498300 NAIPQ13075 1403 aa11.29□□□□□ -0.6
CCSER2-209ENST00000498300 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
CCSER2-209ENST00000498300 COL22A1Q8NFW1 1626 aaPredicted RBP11.28□□□□□ -0.6
CCSER2-209ENST00000498300 ATRNO75882 1429 aa11.28□□□□□ -0.6
CCSER2-209ENST00000498300 RPGRIP1LQ68CZ1 1315 aa11.28□□□□□ -0.6
CCSER2-209ENST00000498300 HFM1A2PYH4 1435 aa11.27□□□□□ -0.6
CCSER2-209ENST00000498300 MYOM2P54296 1465 aa11.27□□□□□ -0.6
CCSER2-209ENST00000498300 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
CCSER2-209ENST00000498300 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
CCSER2-209ENST00000498300 BCL9LQ86UU0 1499 aa11.26□□□□□ -0.61
CCSER2-209ENST00000498300 PXDNQ92626 1479 aa11.26□□□□□ -0.61
CCSER2-209ENST00000498300 LSM11P83369 360 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCSER2-209ENST00000498300 XPCQ01831 940 aaPredicted RBP11.26□□□□□ -0.61
CCSER2-209ENST00000498300 NPHP3Q7Z494 1330 aa11.26□□□□□ -0.61
CCSER2-209ENST00000498300 PPLO60437 1756 aa11.26□□□□□ -0.61
CCSER2-209ENST00000498300 CDC42BPGQ6DT37 1551 aa11.25□□□□□ -0.61
CCSER2-209ENST00000498300 FOXO3O43524 673 aa11.25□□□□□ -0.61
CCSER2-209ENST00000498300 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
CCSER2-209ENST00000498300 RRBP1Q9P2E9 1410 aaKnown RBP11.25□□□□□ -0.61
CCSER2-209ENST00000498300 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
CCSER2-209ENST00000498300 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
CCSER2-209ENST00000498300 MARF1Q9Y4F3 1742 aaKnown RBP11.23□□□□□ -0.61
CCSER2-209ENST00000498300 NUTM2FA1L443 756 aa11.23□□□□□ -0.61
CCSER2-209ENST00000498300 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
CCSER2-209ENST00000498300 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
CCSER2-209ENST00000498300 WAPLQ7Z5K2 1190 aa11.22□□□□□ -0.61
CCSER2-209ENST00000498300 CCDC125Q86Z20 511 aa11.22□□□□□ -0.61
CCSER2-209ENST00000498300 KHSRPQ92945 711 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCSER2-209ENST00000498300 STK26Q9P289 416 aa11.22□□□□□ -0.61
CCSER2-209ENST00000498300 TECPR2O15040 1411 aa11.2□□□□□ -0.62
CCSER2-209ENST00000498300 LRPPRCP42704 1394 aaKnown RBP11.2□□□□□ -0.62
CCSER2-209ENST00000498300 PLEKHH1Q9ULM0 1364 aa11.2□□□□□ -0.62
CCSER2-209ENST00000498300 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.19□□□□□ -0.62
CCSER2-209ENST00000498300 RGL3Q3MIN7 710 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms