RNA–Protein interactions for RNA: ENST00000498244.1

SLC22A18-213, Transcript of solute carrier family 22 member 18, human

TSL 2

Gene SLC22A18, Length 325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC22A18-213	ENST00000498244	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.81	■■■□□ 2.84
SLC22A18-213	ENST00000498244	CABP2	Q9NPB3	220 aa		32.81	■■■□□ 2.84
SLC22A18-213	ENST00000498244	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.8	■■■□□ 2.84
SLC22A18-213	ENST00000498244	SEPT12	Q8IYM1	358 aa		32.8	■■■□□ 2.84
SLC22A18-213	ENST00000498244	PRDM11	Q9NQV5	511 aa		32.79	■■■□□ 2.84
SLC22A18-213	ENST00000498244	ITSN1	Q15811	1721 aa		32.78	■■■□□ 2.84
SLC22A18-213	ENST00000498244	PLEKHG3	A1L390	1219 aa		32.78	■■■□□ 2.84
SLC22A18-213	ENST00000498244	GLI3	P10071	1580 aa		32.76	■■■□□ 2.84
SLC22A18-213	ENST00000498244	ALS2	Q96Q42	1657 aa		32.75	■■■□□ 2.83
SLC22A18-213	ENST00000498244	ABCA3	Q99758	1704 aa		32.75	■■■□□ 2.83
SLC22A18-213	ENST00000498244	CCDC125	Q86Z20	511 aa		32.75	■■■□□ 2.83
SLC22A18-213	ENST00000498244	ABTB2	Q8N961	1025 aa		32.75	■■■□□ 2.83
SLC22A18-213	ENST00000498244	PLCH1	Q4KWH8	1693 aa		32.75	■■■□□ 2.83
SLC22A18-213	ENST00000498244	ROCK2	O75116	1388 aa	Known RBP	32.73	■■■□□ 2.83
SLC22A18-213	ENST00000498244	ZC3H6	P61129	1189 aa	Known RBP	32.73	■■■□□ 2.83
SLC22A18-213	ENST00000498244	POLR3A	O14802	1390 aa	Predicted RBP	32.72	■■■□□ 2.83
SLC22A18-213	ENST00000498244	NWD2	Q9ULI1	1742 aa		32.71	■■■□□ 2.83
SLC22A18-213	ENST00000498244	PPIP5K1	Q6PFW1	1433 aa		32.71	■■■□□ 2.83
SLC22A18-213	ENST00000498244	FAM98C	Q17RN3	349 aa	Known RBP	32.71	■■■□□ 2.83
SLC22A18-213	ENST00000498244	CHRNA2	Q15822	529 aa		32.7	■■■□□ 2.83
SLC22A18-213	ENST00000498244	KRT27	Q7Z3Y8	459 aa		32.69	■■■□□ 2.82
SLC22A18-213	ENST00000498244	CABP1	Q9NZU7	370 aa		32.69	■■■□□ 2.82
SLC22A18-213	ENST00000498244	ONECUT3	O60422	494 aa	Predicted RBP	32.68	■■■□□ 2.82
SLC22A18-213	ENST00000498244	EVC2	Q86UK5	1308 aa		32.68	■■■□□ 2.82
SLC22A18-213	ENST00000498244	KIAA0232	Q92628	1395 aa		32.68	■■■□□ 2.82
SLC22A18-213	ENST00000498244	SF3B2	Q13435	895 aa	Known RBP	32.67	■■■□□ 2.82
SLC22A18-213	ENST00000498244	STRN4	Q9NRL3	753 aa		32.67	■■■□□ 2.82
SLC22A18-213	ENST00000498244	COL14A1	Q05707	1796 aa	Known RBP	32.65	■■■□□ 2.82
SLC22A18-213	ENST00000498244	EVA1C	P58658	441 aa		32.64	■■■□□ 2.82
SLC22A18-213	ENST00000498244	NLRP13	Q86W25	1043 aa		32.64	■■■□□ 2.82
SLC22A18-213	ENST00000498244	TOPAZ1	Q8N9V7	1692 aa		32.62	■■■□□ 2.81
SLC22A18-213	ENST00000498244	QRICH2	Q9H0J4	1663 aa		32.62	■■■□□ 2.81
SLC22A18-213	ENST00000498244	SPATA31A5	Q5VU36	1347 aa		32.6	■■■□□ 2.81
SLC22A18-213	ENST00000498244	SPATA31A7	Q8IWB4	1347 aa		32.6	■■■□□ 2.81
SLC22A18-213	ENST00000498244	ZRANB1	Q9UGI0	708 aa		32.6	■■■□□ 2.81
SLC22A18-213	ENST00000498244	EP400	Q96L91	3159 aa		32.6	■■■□□ 2.81
SLC22A18-213	ENST00000498244	TRPM1	Q7Z4N2	1603 aa		32.59	■■■□□ 2.81
SLC22A18-213	ENST00000498244	TONSL	Q96HA7	1378 aa		32.58	■■■□□ 2.81
SLC22A18-213	ENST00000498244	ZBTB7C	A1YPR0	619 aa		32.58	■■■□□ 2.81
SLC22A18-213	ENST00000498244	TRIM26	Q12899	539 aa	Predicted RBP	32.58	■■■□□ 2.81
SLC22A18-213	ENST00000498244	BLM	P54132	1417 aa	Predicted RBP	32.58	■■■□□ 2.81
SLC22A18-213	ENST00000498244	CARD11	Q9BXL7	1154 aa		32.57	■■■□□ 2.8
SLC22A18-213	ENST00000498244	USP35	Q9P2H5	1018 aa		32.57	■■■□□ 2.8
SLC22A18-213	ENST00000498244	NLRP6	P59044	892 aa		32.56	■■■□□ 2.8
SLC22A18-213	ENST00000498244	NRAP	Q86VF7	1730 aa		32.56	■■■□□ 2.8
SLC22A18-213	ENST00000498244	BRWD3	Q6RI45	1802 aa		32.56	■■■□□ 2.8
SLC22A18-213	ENST00000498244	CRYBG1	Q9Y4K1	1723 aa		32.54	■■■□□ 2.8
SLC22A18-213	ENST00000498244	GC	P02774	474 aa		32.54	■■■□□ 2.8
SLC22A18-213	ENST00000498244	DEFB132	Q7Z7B7	95 aa		32.54	■■■□□ 2.8
SLC22A18-213	ENST00000498244	BRD4	O60885	1362 aa	Predicted RBP	32.52	■■■□□ 2.8
SLC22A18-213	ENST00000498244	SPATA31A1	Q5TZJ5	1347 aa		32.51	■■■□□ 2.8
SLC22A18-213	ENST00000498244	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.51	■■■□□ 2.8
SLC22A18-213	ENST00000498244	FAM182B	Q5T319	152 aa		32.51	■■■□□ 2.79
SLC22A18-213	ENST00000498244	USP6	P35125	1406 aa		32.5	■■■□□ 2.79
SLC22A18-213	ENST00000498244	USP19	O94966	1318 aa		32.5	■■■□□ 2.79
SLC22A18-213	ENST00000498244	ZNF692	Q9BU19	519 aa	Predicted RBP	32.49	■■■□□ 2.79
SLC22A18-213	ENST00000498244	CPD	O75976	1380 aa		32.45	■■■□□ 2.79
SLC22A18-213	ENST00000498244	LARP1	Q6PKG0	1096 aa	Known RBP	32.45	■■■□□ 2.79
SLC22A18-213	ENST00000498244	BAG6	P46379	1132 aa		32.43	■■■□□ 2.78
SLC22A18-213	ENST00000498244	NRK	Q7Z2Y5	1582 aa		32.43	■■■□□ 2.78
SLC22A18-213	ENST00000498244	SSH2	Q76I76	1423 aa		32.43	■■■□□ 2.78
SLC22A18-213	ENST00000498244	TMC1	Q8TDI8	760 aa		32.42	■■■□□ 2.78
SLC22A18-213	ENST00000498244	SOX12	O15370	315 aa		32.41	■■■□□ 2.78
SLC22A18-213	ENST00000498244	TTC21B	Q7Z4L5	1316 aa		32.41	■■■□□ 2.78
SLC22A18-213	ENST00000498244	PDE3B	Q13370	1112 aa		32.4	■■■□□ 2.78
SLC22A18-213	ENST00000498244	TCP11L2	Q8N4U5	519 aa		32.39	■■■□□ 2.78
SLC22A18-213	ENST00000498244	CAMTA1	Q9Y6Y1	1673 aa		32.39	■■■□□ 2.78
SLC22A18-213	ENST00000498244	KTN1	Q86UP2	1357 aa	Known RBP	32.38	■■■□□ 2.77
SLC22A18-213	ENST00000498244	BARGIN	Q6ZT62	677 aa		32.37	■■■□□ 2.77
SLC22A18-213	ENST00000498244	KCNH5	Q8NCM2	988 aa		32.35	■■■□□ 2.77
SLC22A18-213	ENST00000498244	TTC21A	Q8NDW8	1320 aa		32.34	■■■□□ 2.77
SLC22A18-213	ENST00000498244	FAM196A	Q6ZSG2	479 aa		32.34	■■■□□ 2.77
SLC22A18-213	ENST00000498244	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.34	■■■□□ 2.77
SLC22A18-213	ENST00000498244	EN1	Q05925	392 aa	Predicted RBP	32.33	■■■□□ 2.77
SLC22A18-213	ENST00000498244	THRAP3	Q9Y2W1	955 aa	Known RBP	32.33	■■■□□ 2.77
SLC22A18-213	ENST00000498244	SBNO2	Q9Y2G9	1366 aa		32.32	■■■□□ 2.76
SLC22A18-213	ENST00000498244	THSD7A	Q9UPZ6	1657 aa		32.31	■■■□□ 2.76
SLC22A18-213	ENST00000498244	TOM1L2	Q6ZVM7	507 aa		32.31	■■■□□ 2.76
SLC22A18-213	ENST00000498244	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.31	■■■□□ 2.76
SLC22A18-213	ENST00000498244	AATK	Q6ZMQ8	1374 aa		32.31	■■■□□ 2.76
SLC22A18-213	ENST00000498244	TRIM37	O94972	964 aa		32.3	■■■□□ 2.76
SLC22A18-213	ENST00000498244	COL5A2	P05997	1499 aa	Predicted RBP	32.29	■■■□□ 2.76
SLC22A18-213	ENST00000498244	CPSF1	Q10570	1443 aa	Known RBP	32.28	■■■□□ 2.76
SLC22A18-213	ENST00000498244	SLC12A5	Q9H2X9	1139 aa		32.28	■■■□□ 2.76
SLC22A18-213	ENST00000498244	LMO7	Q8WWI1	1683 aa		32.27	■■■□□ 2.76
SLC22A18-213	ENST00000498244	SLIT3	O75094	1523 aa		32.27	■■■□□ 2.76
SLC22A18-213	ENST00000498244	CSB-PGBD3	P0DP91	1061 aa		32.27	■■■□□ 2.76
SLC22A18-213	ENST00000498244	PIK3C2A	O00443	1686 aa		32.27	■■■□□ 2.76
SLC22A18-213	ENST00000498244	AXIN2	Q9Y2T1	843 aa		32.26	■■■□□ 2.75
SLC22A18-213	ENST00000498244	CRB1	P82279	1406 aa		32.26	■■■□□ 2.75
SLC22A18-213	ENST00000498244	ARHGEF25	Q86VW2	580 aa		32.25	■■■□□ 2.75
SLC22A18-213	ENST00000498244	ST20-MTHFS	A0A0A6YYL1	179 aa		32.24	■■■□□ 2.75
SLC22A18-213	ENST00000498244	APBA3	O96018	575 aa		32.24	■■■□□ 2.75
SLC22A18-213	ENST00000498244	TERF2IP	Q9NYB0	399 aa		32.24	■■■□□ 2.75
SLC22A18-213	ENST00000498244	PSD	A5PKW4	1024 aa	Predicted RBP	32.22	■■■□□ 2.75
SLC22A18-213	ENST00000498244	AKAP12	Q02952	1782 aa		32.22	■■■□□ 2.75
SLC22A18-213	ENST00000498244	NME9	Q86XW9	330 aa		32.21	■■■□□ 2.75
SLC22A18-213	ENST00000498244	EZH2	Q15910	746 aa	Known RBP	32.2	■■■□□ 2.75
SLC22A18-213	ENST00000498244	SRCAP	Q6ZRS2	3230 aa		32.19	■■■□□ 2.74
SLC22A18-213	ENST00000498244	RGPD1	P0DJD0	1748 aa		32.19	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms