RNA–Protein interactions for RNA: ENST00000497886.5

TSC2-216, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 3,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-216ENST00000497886 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
TSC2-216ENST00000497886 PHF23Q9BUL5 403 aaPredicted RBP17.12■□□□□ 0.33
TSC2-216ENST00000497886 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
TSC2-216ENST00000497886 NCKAP5LQ9HCH0 1330 aa17.11■□□□□ 0.33
TSC2-216ENST00000497886 EMILIN1Q9Y6C2 1016 aa17.11■□□□□ 0.33
TSC2-216ENST00000497886 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
TSC2-216ENST00000497886 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
TSC2-216ENST00000497886 ANTXR1Q9H6X2 564 aa17.1■□□□□ 0.33
TSC2-216ENST00000497886 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
TSC2-216ENST00000497886 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
TSC2-216ENST00000497886 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
TSC2-216ENST00000497886 SBNO2Q9Y2G9 1366 aa17.1■□□□□ 0.33
TSC2-216ENST00000497886 KIDINS220Q9ULH0 1771 aa17.09■□□□□ 0.33
TSC2-216ENST00000497886 RRS1Q15050 365 aaKnown RBP17.09■□□□□ 0.33
TSC2-216ENST00000497886 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.33
TSC2-216ENST00000497886 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.33
TSC2-216ENST00000497886 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
TSC2-216ENST00000497886 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.32
TSC2-216ENST00000497886 MCM4P33991 863 aa17.08■□□□□ 0.32
TSC2-216ENST00000497886 VWDEQ8N2E2 1590 aa17.08■□□□□ 0.32
TSC2-216ENST00000497886 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
TSC2-216ENST00000497886 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
TSC2-216ENST00000497886 KIAA1210Q9ULL0 1709 aa17.06■□□□□ 0.32
TSC2-216ENST00000497886 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
TSC2-216ENST00000497886 ABCA9Q8IUA7 1624 aa17.06■□□□□ 0.32
TSC2-216ENST00000497886 NME9Q86XW9 330 aa17.06■□□□□ 0.32
TSC2-216ENST00000497886 ADGRB3O60242 1522 aa17.06■□□□□ 0.32
TSC2-216ENST00000497886 TRAK2O60296 914 aa17.06■□□□□ 0.32
TSC2-216ENST00000497886 ZBTB40Q9NUA8 1239 aa17.05■□□□□ 0.32
TSC2-216ENST00000497886 RPGRIP1LQ68CZ1 1315 aa17.05■□□□□ 0.32
TSC2-216ENST00000497886 CHD1LQ86WJ1 897 aa17.05■□□□□ 0.32
TSC2-216ENST00000497886 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
TSC2-216ENST00000497886 ADGRB1O14514 1584 aa17.04■□□□□ 0.32
TSC2-216ENST00000497886 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
TSC2-216ENST00000497886 GLI2P10070 1586 aa17.04■□□□□ 0.32
TSC2-216ENST00000497886 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
TSC2-216ENST00000497886 RRAGDQ9NQL2 400 aaPredicted RBP17.03■□□□□ 0.32
TSC2-216ENST00000497886 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.32
TSC2-216ENST00000497886 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
TSC2-216ENST00000497886 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
TSC2-216ENST00000497886 TXNDC2Q86VQ3 553 aa17.02■□□□□ 0.31
TSC2-216ENST00000497886 NRXN1Q9ULB1 1477 aa17.02■□□□□ 0.31
TSC2-216ENST00000497886 L1TD1Q5T7N2 865 aaKnown RBP17.01■□□□□ 0.31
TSC2-216ENST00000497886 CD2BP2O95400 341 aaKnown RBP17.01■□□□□ 0.31
TSC2-216ENST00000497886 AAMPQ13685 434 aa17.01■□□□□ 0.31
TSC2-216ENST00000497886 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
TSC2-216ENST00000497886 ABCC11Q96J66 1382 aa17.01■□□□□ 0.31
TSC2-216ENST00000497886 POGZQ7Z3K3 1410 aa17■□□□□ 0.31
TSC2-216ENST00000497886 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
TSC2-216ENST00000497886 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
TSC2-216ENST00000497886 OSCARQ8IYS5 282 aa17■□□□□ 0.31
TSC2-216ENST00000497886 C8orf58Q8NAV2 365 aa17■□□□□ 0.31
TSC2-216ENST00000497886 MBIPQ9NS73 344 aa17■□□□□ 0.31
TSC2-216ENST00000497886 ARAP3Q8WWN8 1544 aa16.99■□□□□ 0.31
TSC2-216ENST00000497886 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
TSC2-216ENST00000497886 NUCB1Q02818 461 aa16.99■□□□□ 0.31
TSC2-216ENST00000497886 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
TSC2-216ENST00000497886 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
TSC2-216ENST00000497886 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
TSC2-216ENST00000497886 NAP1L5Q96NT1 182 aaPredicted RBP16.98■□□□□ 0.31
TSC2-216ENST00000497886 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
TSC2-216ENST00000497886 MIS18AQ9NYP9 233 aa16.98■□□□□ 0.31
TSC2-216ENST00000497886 CAMSAP1Q5T5Y3 1602 aa16.98■□□□□ 0.31
TSC2-216ENST00000497886 PPLO60437 1756 aa16.98■□□□□ 0.31
TSC2-216ENST00000497886 YEATS2Q9ULM3 1422 aa16.98■□□□□ 0.31
TSC2-216ENST00000497886 TPRNQ4KMQ1 711 aa16.98■□□□□ 0.31
TSC2-216ENST00000497886 FOXD4L5Q5VV16 416 aaPredicted RBP16.98■□□□□ 0.31
TSC2-216ENST00000497886 FOXD4L4Q8WXT5 416 aaPredicted RBP16.98■□□□□ 0.31
TSC2-216ENST00000497886 NSD2O96028 1365 aa16.97■□□□□ 0.31
TSC2-216ENST00000497886 ABCC3O15438 1527 aa16.97■□□□□ 0.31
TSC2-216ENST00000497886 PNNQ9H307 717 aaKnown RBP16.97■□□□□ 0.31
TSC2-216ENST00000497886 SMARCA5O60264 1052 aaPredicted RBP16.97■□□□□ 0.31
TSC2-216ENST00000497886 VAMP4O75379 141 aa16.97■□□□□ 0.31
TSC2-216ENST00000497886 FCHSD2O94868 740 aa16.96■□□□□ 0.31
TSC2-216ENST00000497886 TBC1D9Q6ZT07 1266 aa16.96■□□□□ 0.31
TSC2-216ENST00000497886 TNPO1Q92973 898 aaKnown RBP16.96■□□□□ 0.31
TSC2-216ENST00000497886 NFE2L2Q16236 605 aa16.96■□□□□ 0.31
TSC2-216ENST00000497886 AEBP1Q8IUX7 1158 aa16.96■□□□□ 0.31
TSC2-216ENST00000497886 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
TSC2-216ENST00000497886 SLC52A1Q9NWF4 448 aa16.96■□□□□ 0.31
TSC2-216ENST00000497886 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.31
TSC2-216ENST00000497886 CT47B1P0C2W7 299 aaPredicted RBP16.96■□□□□ 0.31
TSC2-216ENST00000497886 SLC4A10Q6U841 1118 aa16.96■□□□□ 0.31
TSC2-216ENST00000497886 SETBP1Q9Y6X0 1596 aa16.96■□□□□ 0.3
TSC2-216ENST00000497886 FRMPD1Q5SYB0 1578 aa16.95■□□□□ 0.3
TSC2-216ENST00000497886 MCM10Q7L590 875 aa16.95■□□□□ 0.3
TSC2-216ENST00000497886 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
TSC2-216ENST00000497886 MYO3AQ8NEV4 1616 aa16.95■□□□□ 0.3
TSC2-216ENST00000497886 ZBTB7BO15156 539 aaPredicted RBP16.95■□□□□ 0.3
TSC2-216ENST00000497886 OTUD7AQ8TE49 926 aaPredicted RBP16.94■□□□□ 0.3
TSC2-216ENST00000497886 YTHDC2Q9H6S0 1430 aaKnown RBP16.94■□□□□ 0.3
TSC2-216ENST00000497886 MRPL50Q8N5N7 158 aaKnown RBP16.94■□□□□ 0.3
TSC2-216ENST00000497886 SIRT2Q8IXJ6 389 aa16.94■□□□□ 0.3
TSC2-216ENST00000497886 NOL8Q76FK4 1167 aaKnown RBP16.93■□□□□ 0.3
TSC2-216ENST00000497886 SSFA2P28290 1259 aa16.92■□□□□ 0.3
TSC2-216ENST00000497886 COG3Q96JB2 828 aa16.92■□□□□ 0.3
TSC2-216ENST00000497886 SIGLEC1Q9BZZ2 1709 aa16.92■□□□□ 0.3
TSC2-216ENST00000497886 ZC3H13Q5T200 1668 aaKnown RBP16.92■□□□□ 0.3
TSC2-216ENST00000497886 SULT6B1Q6IMI4 303 aa16.92■□□□□ 0.3
TSC2-216ENST00000497886 GNAI1P63096 354 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms