RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 CSPP1Q1MSJ5 1256 aa9.75□□□□□ -0.85
NEB-216ENST00000497809 JAZF1Q86VZ6 243 aa9.75□□□□□ -0.85
NEB-216ENST00000497809 SCUBE2Q9NQ36 999 aa9.75□□□□□ -0.85
NEB-216ENST00000497809 FAM43BQ6ZT52 329 aaPredicted RBP9.75□□□□□ -0.85
NEB-216ENST00000497809 RIC3Q7Z5B4 369 aa9.75□□□□□ -0.85
NEB-216ENST00000497809 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
NEB-216ENST00000497809 ANP32EQ9BTT0 268 aa9.75□□□□□ -0.85
NEB-216ENST00000497809 FOXD4Q12950 439 aaPredicted RBP9.74□□□□□ -0.85
NEB-216ENST00000497809 HSP90AB2PQ58FF8 381 aa9.74□□□□□ -0.85
NEB-216ENST00000497809 SCAMP3O14828 347 aaKnown RBP9.74□□□□□ -0.85
NEB-216ENST00000497809 KIF12Q96FN5 646 aa9.74□□□□□ -0.85
NEB-216ENST00000497809 ZSWIM4Q9H7M6 989 aa9.74□□□□□ -0.85
NEB-216ENST00000497809 DMGDHQ9UI17 866 aaKnown RBP9.74□□□□□ -0.85
NEB-216ENST00000497809 NOVA2Q9UNW9 492 aaKnown RBP9.74□□□□□ -0.85
NEB-216ENST00000497809 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
NEB-216ENST00000497809 ATN1P54259 1190 aaPredicted RBP9.73□□□□□ -0.85
NEB-216ENST00000497809 MRPL58Q14197 206 aaKnown RBP9.73□□□□□ -0.85
NEB-216ENST00000497809 FAM161AQ3B820 660 aa9.73□□□□□ -0.85
NEB-216ENST00000497809 ATP2B1P20020 1258 aa9.72□□□□□ -0.85
NEB-216ENST00000497809 METTL16Q86W50 562 aaKnown RBP9.72□□□□□ -0.85
NEB-216ENST00000497809 NT5DC4Q86YG4 428 aa9.72□□□□□ -0.85
NEB-216ENST00000497809 L3MBTL3Q96JM7 780 aaPredicted RBP9.72□□□□□ -0.85
NEB-216ENST00000497809 HMX1Q9NP08 348 aaPredicted RBP9.72□□□□□ -0.85
NEB-216ENST00000497809 PNMA2Q9UL42 364 aa9.72□□□□□ -0.85
NEB-216ENST00000497809 IBSPP21815 317 aaPredicted RBP9.72□□□□□ -0.85
NEB-216ENST00000497809 APLP1P51693 650 aa9.72□□□□□ -0.85
NEB-216ENST00000497809 G3BP2Q9UN86 482 aaKnown RBP9.72□□□□□ -0.85
NEB-216ENST00000497809 PLEKHG6Q3KR16 790 aa9.71□□□□□ -0.86
NEB-216ENST00000497809 LONRF3Q496Y0 759 aa9.71□□□□□ -0.86
NEB-216ENST00000497809 RTL5Q5HYW3 569 aaPredicted RBP9.71□□□□□ -0.86
NEB-216ENST00000497809 RPUSD2Q8IZ73 545 aaKnown RBP9.71□□□□□ -0.86
NEB-216ENST00000497809 COL4A3BPQ9Y5P4 624 aa9.71□□□□□ -0.86
NEB-216ENST00000497809 EIF3JO75822 258 aaKnown RBP9.7□□□□□ -0.86
NEB-216ENST00000497809 CDHR5Q9HBB8 845 aa9.7□□□□□ -0.86
NEB-216ENST00000497809 RPS6KL1Q9Y6S9 549 aa9.7□□□□□ -0.86
NEB-216ENST00000497809 SH3BP5O60239 455 aa9.7□□□□□ -0.86
NEB-216ENST00000497809 TIE1P35590 1138 aa9.7□□□□□ -0.86
NEB-216ENST00000497809 ZFYVE27Q5T4F4 411 aa9.7□□□□□ -0.86
NEB-216ENST00000497809 IFNL1Q8IU54 200 aa9.7□□□□□ -0.86
NEB-216ENST00000497809 CCDC146Q8IYE0 955 aa9.7□□□□□ -0.86
NEB-216ENST00000497809 TRIM34Q9BYJ4 488 aa9.7□□□□□ -0.86
NEB-216ENST00000497809 IRF2BPLQ9H1B7 796 aa9.69□□□□□ -0.86
NEB-216ENST00000497809 NPDC1Q9NQX5 325 aaPredicted RBP9.69□□□□□ -0.86
NEB-216ENST00000497809 PRR12Q9ULL5 1215 aa9.69□□□□□ -0.86
NEB-216ENST00000497809 BMS1Q14692 1282 aaKnown RBP9.68□□□□□ -0.86
NEB-216ENST00000497809 STAG1Q8WVM7 1258 aa9.68□□□□□ -0.86
NEB-216ENST00000497809 CAPN10Q9HC96 672 aa9.68□□□□□ -0.86
NEB-216ENST00000497809 ATP9BO43861 1147 aa9.68□□□□□ -0.86
NEB-216ENST00000497809 FAM69CQ0P6D2 419 aa9.68□□□□□ -0.86
NEB-216ENST00000497809 ZNF746Q6NUN9 644 aaPredicted RBP9.68□□□□□ -0.86
NEB-216ENST00000497809 MAF1Q9H063 256 aa9.68□□□□□ -0.86
NEB-216ENST00000497809 BMP2KQ9NSY1 1161 aaPredicted RBP9.68□□□□□ -0.86
NEB-216ENST00000497809 BRINP2Q9C0B6 783 aa9.67□□□□□ -0.86
NEB-216ENST00000497809 PCDH12Q9NPG4 1184 aa9.67□□□□□ -0.86
NEB-216ENST00000497809 MRPL42Q9Y6G3 142 aaKnown RBP9.67□□□□□ -0.86
NEB-216ENST00000497809 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
NEB-216ENST00000497809 PPP1R3GB7ZBB8 358 aa9.66□□□□□ -0.86
NEB-216ENST00000497809 TNNI2P48788 182 aa9.66□□□□□ -0.86
NEB-216ENST00000497809 SPIRE2Q8WWL2 714 aa9.66□□□□□ -0.86
NEB-216ENST00000497809 TSHZ1Q6ZSZ6 1077 aa9.66□□□□□ -0.86
NEB-216ENST00000497809 SLC43A3Q8NBI5 491 aa9.66□□□□□ -0.86
NEB-216ENST00000497809 LILRB3O75022 631 aa9.65□□□□□ -0.86
NEB-216ENST00000497809 TBX4P57082 545 aa9.65□□□□□ -0.86
NEB-216ENST00000497809 GRIPAP1Q4V328 841 aa9.65□□□□□ -0.86
NEB-216ENST00000497809 METTL3Q86U44 580 aaKnown RBP9.65□□□□□ -0.86
NEB-216ENST00000497809 SPTLC1O15269 473 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 HOXA2O43364 376 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 PTGER2P43116 358 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 RHBDL3P58872 404 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 MAP3K9P80192 1104 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 PPP1R18Q6NYC8 613 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 CLEC4GQ6UXB4 293 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 ACBD3Q9H3P7 528 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 IFT57Q9NWB7 429 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 PCDHB15Q9Y5E8 787 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 MAP3K13O43283 966 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 MAPK1P28482 360 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 DNAJA1P31689 397 aaKnown RBP9.64□□□□□ -0.87
NEB-216ENST00000497809 OS9Q13438 667 aaPredicted RBP9.64□□□□□ -0.87
NEB-216ENST00000497809 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 TUSC1Q2TAM9 212 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 C4orf46Q504U0 113 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 RSBN1LQ6PCB5 846 aaPredicted RBP9.64□□□□□ -0.87
NEB-216ENST00000497809 FAM163AQ96GL9 167 aaPredicted RBP9.64□□□□□ -0.87
NEB-216ENST00000497809 ASB16Q96NS5 453 aa9.64□□□□□ -0.87
NEB-216ENST00000497809 RBL2Q08999 1139 aa9.63□□□□□ -0.87
NEB-216ENST00000497809 FILIP1Q7Z7B0 1213 aa9.63□□□□□ -0.87
NEB-216ENST00000497809 ARMC5Q96C12 935 aa9.63□□□□□ -0.87
NEB-216ENST00000497809 ATP2B4P23634 1241 aa9.63□□□□□ -0.87
NEB-216ENST00000497809 RBM10P98175 930 aaKnown RBP9.63□□□□□ -0.87
NEB-216ENST00000497809 C11orf96Q7Z7L8 435 aa9.63□□□□□ -0.87
NEB-216ENST00000497809 ZCRB1Q8TBF4 217 aaKnown RBP9.63□□□□□ -0.87
NEB-216ENST00000497809 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
NEB-216ENST00000497809 POTEFA5A3E0 1075 aa9.62□□□□□ -0.87
NEB-216ENST00000497809 ZNF211Q13398 564 aaPredicted RBP9.62□□□□□ -0.87
NEB-216ENST00000497809 CRTC2Q53ET0 693 aaPredicted RBP9.62□□□□□ -0.87
NEB-216ENST00000497809 RNF187Q5TA31 235 aaPredicted RBP9.62□□□□□ -0.87
NEB-216ENST00000497809 CLP1Q92989 425 aaKnown RBP9.62□□□□□ -0.87
NEB-216ENST00000497809 ANO2Q9NQ90 1003 aa9.62□□□□□ -0.87
NEB-216ENST00000497809 HMGB1P1B2RPK0 211 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms